| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4384719 | 80 (0.890) | 7 (0.080) | 6/258 | NT | 9.1% | coding (881/1503 nt) | yjeM | putative transporter |
| ? | NC_000913 | = 4384746 | 65 (0.770) | coding (908/1503 nt) | yjeM | putative transporter | |||||
GTATTGTTTTTGCCGCTATTGTTATTTCAATCGGTTATTCGCTGGCAATATTTTTATGGGGCGTCAGCACAAACTGGCAGCAGGTATTAAGTAATGGTTCCGTTAACCTCGGCAATATTACCTATGTGCTGATGAAGAGCCTTGGGATGACGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4384566‑4384719‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgacgctTCAGGTGACAAATGCAGTGCATTACCCAGCGTCATCCCAAGGCTCTTCATCAGCACATAGGTAATATTGCCGAGGTTAACGGAACCATTACTTAATACCTGCTGCCAGTTTGTGCTGACGCCCCATAAAAATATTGCCAGCGAATAAC < NC_000913/4384746‑4384599 GTATTGTTTTTGCCGCTATTGTTATTTCTATCGGTTATTCGCTGTCAATATTTTTATGGGGCGTCAGCACAAACTGGCAGCAGGTATTAAGTAATGGTTCCGTTAACCTCGGCAATATTACCTATGTGCTGATGAAGAGCCTTGGGATG < 1:861064/149‑1GTATTGTTTTTGCCGCTATTGTTATTTCAATCGGTTATTCGCTGGCAATATTTTTATGGGGCGTCAGCACAAACTGGCAGCAGGTATTAAGTAATGGTTCCGTTAACCTCGGCAATATTACCTATGTGCTGATGAAGAGCCTTGGGATG > 1:1255711/1‑149 TTGTTTTTGCCGCTATTGTTATTTCAATCGGTTATTCGCTGGCAATATTTTTATGGGGCGTCAGCACAAACTGGCAGCAGGTATTAAGTAATGGTTCCGTTAACCTCGGCAATATTACCTATGTGCTGATGAAGAGCCTTGGGATGACG > 2:521350/1‑149 GTTTTTGCCGCTTTTGTTATTTCAATCGGTTATTCGCTGGCAATATTTTTATGGGGCGTCAGCACAAACTGGCAGCAGGTATTAAGTAATGGTTCCGTTAACCTCGGCAATATTACCTATGTGCTGATGAAGAGCCTTGGGATGACGCT < 2:763028/149‑1 GCTATTGTTATTTCAATCGGTTATTCGCTGGCAATATTTTTATGGGGCGTCAGCACAAACTGGCAGCAGGTATTAAGTAATGGTTCCGTTAACCTCGGCAATATTACCTATGTGCTGATGAAGAGCCTTGGGATGACGCTTCAGGTGAC < 1:1085343/149‑1 tTTTCAATAGGTTATTCGCTGGCAATATTTTTATGGGGCGGCAGCACAAACTGGCAGCAGGAATTAAGTAATGGTTCCGTTAACCTCGGCAATATTACCTATGTGCTGATGAAGAGCCTTGGGATGACGCTTCAGGTGACAAATGCAGT < 2:313876/148‑1 ATTTCAAGCGGTTCTTCGCTGGCAATATTTTTCTGGGGCGTCAGCACAAACTGGCAGCAGGTATTAAGTAATGGTGCCGTTAACCTCGGCAATATTACCTATGTGCTGATGAAGAGCCTTGGGATGACGCTTCAGGTGACAAATGCAGT < 2:313875/149‑1 tgaAATATTTTTTTTTGGCGTCAGCACAAACTGGCAGCAGGTTTTAAGTCATGGTTCCGTTAACCTCGGCTATATTACCTATGTGCTGATGAAGAGCCTTGGGATGACGCTTCAGGTGACAAATGCAGTGCATTACCCAGCGTCATCCC < 2:635625/146‑1 GCAATATTTTTATGGGGCGTCAGCACAAACTGGCAGCAGGTATTAAGTAATGGTTCCGTTAACCTCGGCAATATTACCTATGTGCTGATGAAGAGCCTTGGGATGACGCTTCAGGGGACAAATGCAGTGCATTACCCAGCGTCATCCCA < 1:509946/149‑1 TTTTATGGGCCGTCAGCACAAACTGGCAGCAGGTATTAAGTAATGGTTCCGTTAACCTCGGCAATATAACCTATGTGCTGATGAAGAGCCTTGGGATGACGCTTCAGGTGACAAATGCAGTGCATTACCCAGCGTCATCCCAAGGCTCT < 1:281637/149‑1 cCAGTTATTAAGTAATGGTTCCGTTAACCTCGGAAATATTACCTATGTGCTGATGAAGAGCCTTGGGATGACGCTTCAGGTGACAAATGCAGTGCATTACCCAGCGTCATCCCAAGGCTCTTCATCAGCACATAGGTAATATTGCCGAG < 2:1372294/148‑1 TGACGCTTCAGGTGACAAATGCAGTGCATTACCCAGCGTCATCCCAAGGCTCTTCATCAGCACATAGGTAATATTGCCGAGGTTAACGGAACCATTACTTAATACCTGCTGCCAGTTTGTGCTGACGCCCCATAAAAATATTGCCAGCG > 2:368522/1‑149 TTCAGGTGACAAATGCAGTGCATTACCCAGCGTCATCCCAAGGCTCTTCATCAGCACATAGGTAATATTGCCGAGGTTAACGGAACCATTACTTAATACCTGCTGCCAGTTTGTGCTGACGCCCCATAAAAATATTGCCAGCGAATAAC > 1:787167/1‑149 TTCAGGTGACAAATGCAGTGCATTACCCAGCGTCATCCCAAGGCTCTTCATCAGCACATAGGTAATATTGCCGAGGTTAACGGAACCATTACTTAATACCTGCTGCCAGTTTGTGCTGACGCCCCATAAAAATATTGCCAGCGAATAAC > 1:97025/1‑149 GTATTGTTTTTGCCGCTATTGTTATTTCAATCGGTTATTCGCTGGCAATATTTTTATGGGGCGTCAGCACAAACTGGCAGCAGGTATTAAGTAATGGTTCCGTTAACCTCGGCAATATTACCTATGTGCTGATGAAGAGCCTTGGGATGACGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4384566‑4384719‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgacgctTCAGGTGACAAATGCAGTGCATTACCCAGCGTCATCCCAAGGCTCTTCATCAGCACATAGGTAATATTGCCGAGGTTAACGGAACCATTACTTAATACCTGCTGCCAGTTTGTGCTGACGCCCCATAAAAATATTGCCAGCGAATAAC < NC_000913/4384746‑4384599 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |