New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 100847370 (0.780)4 (0.050) 4/262 NT 5.6% coding (630/2109 nt) rlmL 23S rRNA m(2)G2445 and m(7)G2069 methyltransferases, SAM‑dependent
?NC_000913 = 1008530 68 (0.790)coding (687/2109 nt) rlmL 23S rRNA m(2)G2445 and m(7)G2069 methyltransferases, SAM‑dependent

TGCGTGGCTATCGCGATCGTGCTGGTATTGCGCCGATCAAAGAAACCCTGGCAGCCGCTATTGTGATGCGATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACG  >  NC_000913/1008325‑1008621
                                                                                                                                                    |                                                                                                                                                    
tGCGTGGCTATCGCGATCGTGCTGTTATTGCGCCGATCAAAGAAACCCTGGCAGCCGCTATTGTGATGCGATCCGTCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTG                                                                                                                                                      <  1:326498‑M1/149‑1 (MQ=255)
tGCGTGGCTATCGCGATCGTGCTGGTATTGCGCCGATCAAAGAAACCCTGGCAGCCGCTATTGTGATGCGATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTG                                                                                                                                                      >  2:987628‑M1/1‑149 (MQ=255)
tGCGTGGCTATCGCGATCGTGCTGGTATTGCGCCGATCAAAGAAACCCTGGCAGCCGCTATTGTGATGCGATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTG                                                                                                                                                      <  1:1357357‑M1/149‑1 (MQ=255)
        tATCGCGATCGTGCTGGTATTGCGCCGATCAAAGAAACCCTGGCAGCCGCTATTGTGATGCGATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGa                                                                                                                                              >  1:703651/1‑149 (MQ=255)
         aTCGCGATCGTGCTGGTATTGCGCCGATCAAAGAAACCCTGGCAGCCGCTATTGTGATGCGATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGAt                                                                                                                                             <  1:1071171/149‑1 (MQ=255)
          tCGCGATCGTGCTGGTATTGCGCCGATCAAAGAAACCCTGGCAGCCGCTATTGTGATGCGATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATc                                                                                                                                            <  1:1036633/149‑1 (MQ=255)
             ggctCGTGCTGGTCTTGCGCCGATCAAAGCAACCCTGGCAGGCGCGATTGTGATGCGATCCGGCTGGGAGTCAGGACCACCGCTGCGCGCTCCGATGTGTGGTTCGTGTACGTTGCTGATTGAAGCAGCGATGCGGGCGACCGATcgcg                                                                                                                                         <  1:63055/146‑1 (MQ=255)
              gATCGTGCTGGTATTGCGCCGATCAAAGAAACCCTGGCAGCCGCTATTGTGATGCGATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCgcgc                                                                                                                                        >  2:188735/1‑149 (MQ=255)
                     cTGGTATTGCGCCGATCAAAGAAACCCTGGCAGCCGCTATTGTGATGCGATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGc                                                                                                                                 >  2:28662/1‑149 (MQ=255)
                        gTATTGCGCCGATCAAAGAAACCCTGGCAGCCGCTATTGTGATGCGATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTg                                                                                                                              >  1:57168/1‑149 (MQ=255)
                        gTATTGCGCCGATCAAAGAAACCCTGGCAGCCGCTATTGTGATGCGATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTg                                                                                                                              <  1:348795/149‑1 (MQ=255)
                        gTATTGCGCCGATCAAAGAAACCCTGGCAGCCGCTATTGTGATGCGATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTg                                                                                                                              >  2:597911/1‑149 (MQ=255)
                        gTATTGCGCCGATCAAAGAAACCCTGGCAGCCGCTATTGTGATGCGATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTg                                                                                                                              >  2:67105/1‑149 (MQ=255)
                         tATTGCGCCGATCAAAGAAACCCTGGCAGCCGCTATTGTGATGCGATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGc                                                                                                                             <  2:444636/149‑1 (MQ=255)
                          aTTGCGCCGATCAAAGAAACCCTGGCAGCCGCTATTGTGATGCGATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGGTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGcc                                                                                                                            >  1:155133/1‑148 (MQ=255)
                          aTTGCGCCGATCAAAGAAACCCTCGCAGCCGCTATTGTGATGCGATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCa                                                                                                                            <  2:1144897/149‑1 (MQ=255)
                           ttGCGCCGATCAAAGAAACCCTGGCAGCCGCTATTGTGATGCGATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGcgcccagccgctaaagccccaacgccc                                                                                                                           >  2:1159148‑M1/1‑122 (MQ=255)
                                ccGATCAAAGAAACCCTGGCAGCCGCTATTGTGATGCGATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGAACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTgg                                                                                                                      <  2:471983/149‑1 (MQ=255)
                                       aaGAAACCCTGGCAGCCGCTATTGTGATGCGATCCGGCTGGCAGCCAGGAACACCGCTGCTCGCTCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTgg                                                                                                               >  1:798822/1‑149 (MQ=255)
                                       aaGAAACCCTGGCAGCCGCTATTGTGATGCGATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTgg                                                                                                               >  1:1194792/1‑149 (MQ=255)
                                       aaGAAACCCTGGCAGCCGCTATTGTGATGCGATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTgg                                                                                                               >  2:1375332/1‑149 (MQ=255)
                                        aGAAACCCTGGCAGCCGCTATTGTGATGCGATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTggg                                                                                                              >  2:1472586/1‑149 (MQ=255)
                                          aaaCCCTGGCAGCCGCTATTGTGATGCGATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCAATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGc                                                                                                            <  2:599878/149‑1 (MQ=255)
                                          aaaCCCTGGCAGCCGCTATTGTGATGCGAGCCGGCTGGCAGCCAGGAACACCGCGGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGc                                                                                                            <  1:1061418/149‑1 (MQ=255)
                                              ccTGGCAGCCGCTATTGTGATGCGATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCtttg                                                                                                        >  2:170678/1‑148 (MQ=255)
                                               cTGGCAGCCGCTATTGTGATGCGATACGGCTGGCAGCCAGGAACAACGCTGCTCGATCCGAAGTGTGTTTCCGGTACGTTGCTGATTTAAGCAGCGATGCTGCCGAACTATCTCGCACCAGGCTTGCACAGTGGGCGTTGGGGCTTTAg                                                                                                       >  2:697789/1‑149 (MQ=255)
                                                  gccgCCGCTCTTGGGATGCGATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTCGCgg                                                                                                    <  1:1121764/146‑1 (MQ=255)
                                                   cAGCCGCTATTGTGATGCGATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGc                                                                                                   <  2:1416577/149‑1 (MQ=255)
                                                   cAGCCGCTATTGTGATGCGATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGc                                                                                                   <  2:379786/149‑1 (MQ=255)
                                                     gCCGCTATTGTGATGCGATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGGTGCTGATTGAAGCAGCGATGCTGcgcccagccgctaaagccccaacgcccacggtgcaagcctggtgcgcgatcgg                                                                                                 <  1:618360‑M1/149‑54 (MQ=255)
                                                      ccGCTATTGTGATGCGATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTgg                                                                                                <  2:1155392/149‑1 (MQ=255)
                                                           aTTGTGATGCGATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGca                                                                                           >  2:1130073‑M2/1‑147 (MQ=255)
                                                           aTTGTGATGCGAGCCGGCTGGCAGCCAGGAACCCCGCTGCGCGAGCCGATGGGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGca                                                                                           >  1:1037879‑M2/1‑147 (MQ=255)
                                                            ttGTGATGCGATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGcag                                                                                          >  1:922868‑M2/1‑146 (MQ=255)
                                                               tgATGCGATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGcagcat                                                                                       <  1:1442143‑M2/149‑7 (MQ=255)
                                                               tgATGCGATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGcagcat                                                                                       <  2:550303‑M2/149‑7 (MQ=255)
                                                               ggaagCGATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGAGGCTCCGGCACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCat                                                                                       <  1:1287353/145‑1 (MQ=255)
                                                                 aTGCGATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCGTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCatga                                                                                     >  2:170854/1‑149 (MQ=255)
                                                                  tGCGATCCGGCTGGCAGCCAGGAACACTGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGcgcccagccgctaaagccccaacgcccacggtgcaagcctggtgcgcgatcggtcgccagcatcgc                                                                                    <  2:856554‑M1/149‑67 (MQ=255)
                                                                  tGCGATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCatgat                                                                                    >  1:1206416/1‑149 (MQ=255)
                                                                  tGCGATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCatgat                                                                                    >  2:7592/1‑149 (MQ=255)
                                                                     gATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGCTTGACGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGGGGGCGGTGGGGCTTTAGCGGCTGGGCGCAGCATGATGaa                                                                                 <  1:1110402/149‑1 (MQ=255)
                                                                     gATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGaa                                                                                 >  1:336558/1‑149 (MQ=255)
                                                                     gATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTGGGGGCTTTAGCGGCTGGGCGCAGCATGATGaa                                                                                 >  1:1169318/1‑149 (MQ=255)
                                                                     gATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGGGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGaa                                                                                 <  1:1116041/149‑1 (MQ=255)
                                                                      aTCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAg                                                                                <  1:760627/149‑1 (MQ=255)
                                                                       tCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGc                                                                               <  2:1455391/149‑1 (MQ=255)
                                                                         cGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGCAGCTa                                                                             >  2:452302/1‑149 (MQ=255)
                                                                         cGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTa                                                                             >  1:691110/1‑149 (MQ=255)
                                                                          ggCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTAt                                                                            >  2:776790/1‑149 (MQ=255)
                                                                           gCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGcgcccagccgctaaagccccaacgcccacggtgcaagcctggtgcgcgatcggtcgccagcatcgctgcttcaat                                                                           <  1:1159148‑M1/149‑76 (MQ=255)
                                                                           gCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATc                                                                           <  2:703651/149‑1 (MQ=255)
                                                                             tGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTg                                                                         >  2:713921/1‑149 (MQ=255)
                                                                               gCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGc                                                                       <  1:550303/149‑1 (MQ=255)
                                                                                 aGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAg                                                                     >  1:611785/1‑149 (MQ=255)
                                                                                   ccAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGa                                                                   >  1:785316/1‑149 (MQ=255)
                                                                                    cAGGAACACCGCTGCTCGATCCGATGTGTGGTGCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGaa                                                                  <  1:67105/149‑1 (MQ=255)
                                                                                      ggAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGt                                                                <  1:1142578/149‑1 (MQ=255)
                                                                                         acacCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGaa                                                             <  1:188735/149‑1 (MQ=255)
                                                                                           acCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAg                                                           >  1:345589/1‑149 (MQ=255)
                                                                                           acCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAg                                                           >  2:1466266/1‑149 (MQ=255)
                                                                                             cGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACAAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCg                                                         >  1:1371953/1‑149 (MQ=255)
                                                                                                tgctCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGaa                                                      <  2:57168/149‑1 (MQ=255)
                                                                                                  ctCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAgc                                                    <  1:1416522/149‑1 (MQ=255)
                                                                                                            tgtgtgGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTcgc                                          <  1:1146927/149‑1 (MQ=255)
                                                                                                            tgtgtgGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTcgc                                          <  2:476324/149‑1 (MQ=255)
                                                                                                               gtgGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGTCTTGCACAGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGcc                                       >  2:236234/1‑149 (MQ=255)
                                                                                                               gtgGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGcc                                       >  2:1175771/1‑149 (MQ=255)
                                                                                                                 ggTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCg                                     <  2:1442143/149‑1 (MQ=255)
                                                                                                                   ttCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTa                                   <  1:28662/149‑1 (MQ=255)
                                                                                                                     ccGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGGGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTaaa                                 <  2:131633/149‑1 (MQ=255)
                                                                                                                      cGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAg                                <  1:1375332/149‑1 (MQ=255)
                                                                                                                        gTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGc                              <  2:857038/149‑1 (MQ=255)
                                                                                                                         tACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTTGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCCCAACCTCGCGCCCGTAAAGGcc                             >  1:1302416/1‑149 (MQ=255)
                                                                                                                           cGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCACGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTg                           <  2:809583/149‑1 (MQ=255)
                                                                                                                              tGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCt                        <  1:713921/149‑1 (MQ=255)
                                                                                                                                cTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGa                      >  2:182887/1‑149 (MQ=255)
                                                                                                                                   aTTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGcagcatcgctgcttcaatcagcaacgtaccggaaccacacatcggatcgagcagcggtgttcctggctgccagc                   <  1:1159148‑M2/149‑75 (MQ=255)
                                                                                                                                   aTTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGta                   <  2:1169318/149‑1 (MQ=255)
                                                                                                                                      gAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAg                >  2:1521196/1‑149 (MQ=255)
                                                                                                                                      gAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAg                <  1:739994/149‑1 (MQ=255)
                                                                                                                                       aaGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGc               >  1:509594/1‑149 (MQ=255)
                                                                                                                                        agcagcGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGct              >  2:782806/1‑149 (MQ=255)
                                                                                                                                            gcGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGcagcatcgctgcttcaatcagcaacgtaccggaaccacacatcggatcgagcagcagtgttcctggctgccagccggatcgca          <  2:856554‑M2/149‑84 (MQ=255)
                                                                                                                                               aTGCTGcgcccagccgctaaagccccaacgcccacggtgcaagcctggtgcgcgatcggtcgccagcatcgctgcttcaatcagcaacgtaccggaaccacacatcggatcgagcagcggtgttcctggctgccagccggatcgcatca       <  2:550303‑M1/149‑144 (MQ=255)
                                                                                                                                               aTGCTGcgcccagccgctaaagccccaacgcccacggtgcaagcctggtgcgcgatcggtcgccagcatcgctgcttcaatcagcaacgtaccggaaccacacatcggatcgagcagcggtgttcctggctgccagccggatcgcatca       <  1:1442143‑M1/149‑144 (MQ=255)
                                                                                                                                                tGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCAtttt      <  1:987628/149‑1 (MQ=255)
                                                                                                                                                tGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCAtttt      <  1:597911/149‑1 (MQ=255)
                                                                                                                                                  ctgcgcccagccgctaaagccccaacgcccacggtgcaagcctggtgcgcgatcggtcgccagcatcgctgcttcaatcagcaacgtaccggaaccacacatcggatcgagcagcggtgttcctggctgccagccggatcgcatcacaa    >  1:922868‑M1/1‑3 (MQ=255)
                                                                                                                                                  cTGGCGACCGATCGGGCACCAGGCTTGCACCGTTGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGCCAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTa    <  2:96775/149‑1 (MQ=255)
                                                                                                                                                   tgcgcccagccgctaaagccccaacgcccacggtgcaagcctggtgcgcgatcggtcgccagcatcgctgcttcaatcagcaacgtaccggaaccacccatcggctcgcgcagcggggttcctggctgccagccggctcgcatcacaat   >  1:1037879‑M1/1‑2 (MQ=255)
                                                                                                                                                   tgcgcccagccgctaaagccccaacgcccacggtgcaagcctggtgcgcgatcggtcgccagcatcgctgcttcaatcagcaacgtaccggaaccacacatcggatcgagcagcggtgttcctggctgccagccggatcgcatcacaat   >  2:1130073‑M1/1‑2 (MQ=255)
                                                                                                                                                    ggCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACg  <  1:776790/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
TGCGTGGCTATCGCGATCGTGCTGGTATTGCGCCGATCAAAGAAACCCTGGCAGCCGCTATTGTGATGCGATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACG  >  NC_000913/1008325‑1008621

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.