BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1032296	76 (0.840)	4 (0.050)	4/260	NT	5.1%	coding (158/1119 nt)	hyaA	hydrogenase 1, small subunit
*	?	NC_000913	= 1032317	77 (0.900)	4 (0.050)	4/260	NT	5.1%	coding (179/1119 nt)	hyaA	hydrogenase 1, small subunit

Only 100 of 103 total aligned reads displayed.

GAGGAAACATTTTACCAGGCCATGCGGCGTCAGGGCGTTACCCGGCGCAGCTTTCTCAAATATTGTAGTCTGGCTGCCACGTCGCTGGGATTAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACCTGCTGTACCGAATCTTTTATCCGCTCCGCTCACCCACTGGCGAAGGACGTCATCCTTTCCCTGATTTCCCTCGATTACGACGATACTTTGATGGCTGCCGCCGGAACCCAGGCGGA  >  NC_000913/1032148‑1032443

gAGGAAACATTTTACCAGGCCATGCGGCGTCAGGGCGTTACCCGGCGCAGCTTTCTCAAATATTGTAGTCTGGCTGCCACGTCGCTGGGATTAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCC                                                                                                                                                      >  2:782969‑M1/1‑149 (MQ=255)

   gAAACATTTTACCAGGCCATGCGGCGTCAGGGCGTTACCCGGCGCAGCTTTCTCAAATATTGTAGTCTGGCTGCCACGTCGCTGGGTTTAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCggt                                                                                                                                                   >  2:1480291/1‑149 (MQ=255)

   gAAACATTTTACCAGGCCATGCGGCGTCAGGGCGTTACCCGGCGCAGCTTTCTCAAATATTGTAGTCTGGCTGCCACGTCGCTGGGATTAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCggt                                                                                                                                                   <  1:755384/149‑1 (MQ=255)

   gAAACATTTTACCAGGCCATGCGGCGTCAGGGCGTTACCCGGCGCAGCTTTCTCAAATATTGTAGTCTGGCTGCCACGTCGCTGGGATTAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCaga                                                                                                                                                   >  1:579067‑M1/1‑146 (MQ=255)

      aCATTTTACCAGGCCATGCGGCGTCAGGGCGTTACCCGGCGCAGCTTTCTCAAATATTGTAGTCTGGCTGCCACGTCGCTGGGATTAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGGATTCCggtggt                                                                                                                                                >  2:891200/1‑149 (MQ=255)

       cATTTTACCAGGCCCTGCGGCGTCAGGGCGTTACCCGGCGCAGCTTTCTCAACTATTGTAGTCTGGCTGCCACGTCGCTGGGATTAGGCGCGGGAATGGCACCAAAGATGGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTa                                                                                                                                               <  2:358403/149‑1 (MQ=255)

         ttttACCAGGCCATGCGGCGTCAGGGCGTTACCCGGCGCAGCTTTCTCAAATATTGTAGTCTGGCTGCCACGTCGCTGGGATTAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATg                                                                                                                                             >  1:737060/1‑149 (MQ=255)

             aCCAGGCCATGCGGCGTCAGGGCGTTACCCGGCGCAGCTTTCTCAAATATTGTAGTCTGGCTGCCACGTCGCTGGGATTAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATc                                                                                                                                         >  1:1458456/1‑149 (MQ=255)

               cAGGCCATGCGGCGTCAGGGCGTTACCCGGCGCAGCTTTCTCAAATATTGTAGTCTGGCTGCCACGTCGCTGGGATTAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATccc                                                                                                                                       >  1:846997/1‑148 (MQ=255)

                aGGCCATGCGGCGTCAGGGCGTTACCCGGCGCAGCTTTCTCAAATATTGTAGTCTGGCTGCCACGTCGCTGGGATTAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCAc                                                                                                                                      <  1:1175435/149‑1 (MQ=255)

                 ggCCATGCGGCGTCAGGGCGTTACCCGGCGCAGCTTTCTCAAATATTGTAGTCTGGCTGCCACGTCGCTGGGATTAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACg                                                                                                                                     <  1:694503/149‑1 (MQ=255)

                   ccATGCGGCGTCAGGGCGTTACCCGGCGCAGCTTTCTCAAATATTGTAGTCTGGCTGCCACGTCGCTGGGATTAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGt                                                                                                                                   <  1:525108/149‑1 (MQ=255)

                     aTGCGGCGTCAGGGCGTTACCCGGCGCAGCTTTCTCAAATATTGTAGTCTGGCTGCCACGTCGCTGGGATTAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTcg                                                                                                                                 >  1:1308155/1‑148 (MQ=255)

                      tGCGGCGTCAGGGCGTTACCCGGCGCAGCTTTCTCAAATATTGTAGTCTGGCTGCCACGTCGCTGGGATTAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTg                                                                                                                                <  1:458198‑M2/149‑2 (MQ=255)

                         ggcgTCAGGGCGTTACCCGGCGCAGCTTTCTCAAATATTGTAGTCTGGCTGCCACGTCGCTGGGATTAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTggaa                                                                                                                             <  1:1083137‑M2/149‑5 (MQ=255)

                         ggcgTCAGGGCGTTACCCGGCGCAGCTTTCTCAAATATTGTAGTCTGGCTGCCACGTCGCTGGAATTAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTggaa                                                                                                                             >  1:1162792‑M2/1‑145 (MQ=255)

                           cgTCAGGGCGTTACCCGGCGCAGCTTTCTCAAATATTGTAGTCTGGCTGCCACGTCGCTGGGATTAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTggaatg                                                                                                                           >  2:90492‑M2/1‑143 (MQ=255)

                           cgTCAGGGCGTTACCCGGCGCAGCTTTCTCAAATATTGTAGTCTGGCTGCCACGTCGCTGGGATTAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTggaatg                                                                                                                           >  2:925069‑M2/1‑143 (MQ=255)

                            gTCAGGGCGTTACCCGGCGCAGCTTTCTCAAATATTGTAGTCTGGCTGCCACGTCGCTGGGATTAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTggaatgc                                                                                                                          >  1:1516168‑M2/1‑142 (MQ=255)

                             tCAGGGCGTTACCCGGCGCAGCTTTCTCAAATATTGTAGTCTGGCTGCCACGTCGCTGGGATTAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCagaccgtggatccataccaccggaatgcg                                                                                                                         <  1:1127046‑M1/149‑30 (MQ=255)

                              cAGGGCGTTACCCGGCGCAGCTTTCTCAAATATTGTAGTCTGGCTGCCACGTCGCTGGGATTAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCagaccgtggatccataccaccggaatgcgc                                                                                                                        <  2:1475656‑M1/149‑31 (MQ=255)

                              cAGGGCGTTACCCGGCGCAGCTTTCTCAAATATTGTAGTCTGGCTGCCACGTCGCTGGGATTAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCAc                                                                                                                       <  2:188959/149‑1 (MQ=255)

                               aGGGCGTTACCCGGCGCAGCTTTCTCAAATCTTGTAGTCTGGCTGCCACGTCGCTGGGATTAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCAcc                                                                                                                      <  1:881549/149‑1 (MQ=255)

                                gggCGTTACCCGGCGCAGCTTTCTCAAATATTGTAGTCTGGCTGCCACGTCGCTGGGATTAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCagaccgtggatccataccaccggaatgcgcgg                                                                                                                      <  2:579067‑M1/149‑33 (MQ=255)

                                gggCGTTACCCGGCGCAGCTTTCTCAAATATTGTAGTCTGGCTGCCACGTCGCTGGGATTAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACct                                                                                                                     >  1:1266601/1‑149 (MQ=255)

                                 ggCGTTACCCGGCGGAGCTTTCTCAAATATTGTAGTCTGGCTGCCACGTCGCGTGGATTAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACctg                                                                                                                    <  2:1011759/149‑1 (MQ=255)

                                   cGTTACCCGGCGCAGCTTTCTCAAATATTGTAGTCTGGCTGCCACGTCGCTGGGATTAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCagaccgtggatccataccaccggaatgcgcggttt                                                                                                                   <  2:200218‑M1/149‑36 (MQ=255)

                                    gTTACCCGGCGCAGCTTTCTCAAATATTGTAGTCTGGCTGCCACGTCGCTGGGATTAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGCACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACctgctg                                                                                                                 >  1:662340/1‑149 (MQ=255)

                                    gTTACCCGGCGCAGCTTTCTCAAATATTGTAGTCTGGCTGCCACGTCGCTGGGATTAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACctgctg                                                                                                                 <  2:912178/149‑1 (MQ=255)

                                    gTTACCCGGCGCAGCTTTCTCAAATATTGTAGTCTGGCTGCCACGTCGCTGGGATTAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACctgctg                                                                                                                 >  2:1347464/1‑149 (MQ=255)

                                    gTTACCCGGCGCAGCTTTCTCAAATATTGTAGTCTGGCTGCCACGTCGCTGGGATTAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACctgctg                                                                                                                 <  1:1343029/149‑1 (MQ=255)

                                      tACCCGGCGCAGCTTTCTCAAATATTGTAGTCTGGCTGCCACGTCGCTGGGATTAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACCTGCTGTa                                                                                                               <  2:1474640/149‑1 (MQ=255)

                                       aCCCGGCGCAGCTTTCTCAAATATTGTAGTCTGGCTGCCACGTCGCTGGGATTAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTGCGGTGGTATGGATCCAGGGTCTTG‑AATGCGCCTGCGGTAc                                                                                                              >  2:117359/1‑149 (MQ=255)

                                              gcAGCTTTCTCAACTATTGTAGTCTGGCTGCCACGTCGCTGGGATTAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGTTCCACGGTCTGG‑AAGGCACCTGCTGTACCGAATCt                                                                                                       <  1:1454127/149‑1 (MQ=255)

                                               cAGCTTTCTCAAATATTGTAGTCTGGCTGCCCCGTCGCTGGGATTAGGCGCGGGAATGGCCCCAACGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACCTGCTGTACCGAATCtt                                                                                                      <  1:873256/149‑1 (MQ=255)

                                               cAGCTTTCTCAAATATTGTAGTCTGGCTGCCACGTCGCTGGGATTAGGCGCGGGAATGGCACCAAATATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACCTGCTGTACCGAATCtt                                                                                                      <  1:76179/149‑1 (MQ=255)

                                                 gCTTTCTCAAATATTGTAGTCTGGCTGCCACGTCGCTGGGATTAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACCTGCTGTACCGAATCtttt                                                                                                    <  2:460217/149‑1 (MQ=255)

                                                  cTTTCTCAAATATTGTAGTCTGGCTGCCACGTCGCTGGGATTAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACCTGCTGTACCGAATCTTTTa                                                                                                   >  2:920150/1‑149 (MQ=255)

                                                  cTTTCTCAAATATTGTAGTCTGGCTGCCACGTCGCTGGGATTAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGAACCACGGTCTGG‑AATGCACCTGCTGTACCGAATCTTTTa                                                                                                   <  2:23086/149‑1 (MQ=255)

                                                   tttCTCAAATATTGTAGTCTGGCTGCCACGTCGCTGGGATTAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACCTGCTGTACCGAATCTTTTAt                                                                                                  >  2:1261526/1‑149 (MQ=255)

                                                       tcAAATATTGTAGTCTGGCTGCCACGTCGCTGGGATTAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACCTGCTGTACCGAATCTTTTAtccgc                                                                                              >  1:741769/1‑149 (MQ=255)

                                                         aaaTATTGTAGTCTGGCTGCCACGTCGCTGGGATTAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACCTGCTGTACCGAATCTTTTAtccgctc                                                                                            >  1:1306453/1‑149 (MQ=255)

                                                         aaaTATTGTAGTCTGGCTGCCACGTCGCTGGGATTAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACCTGCTGTACCGAATCTTTTAtccgctc                                                                                            >  2:122808/1‑149 (MQ=255)

                                                         aaaTATTGTAGTCTGGCTGCCACGTCGCTGGGATTAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACCTGCTGTACCAAATCTTTTAtccgctc                                                                                            >  2:716139/1‑149 (MQ=255)

                                                              ttGTAGTCTGGCTGCCACGTCGCTGGGATTAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACCTGCTGTACCGAATCTTTTATCcgctccgctc                                                                                       <  1:1515810/149‑1 (MQ=255)

                                                              ttGTAGTCTGGCTGCCACGTCGCTCGGATTAGGCGCGGGAATGGCACAAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATACACGGTCTGG‑AATGCACCTGCTGTACCGAATCTTTTAtccgctccgcac                                                                                       >  1:460419/1‑147 (MQ=255)

                                                                 tAGTCTGGCTGCCACGTCGCTGGGATTAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACCTGCTGTACCGAATCTTTTATCCGCTCCGCTCAcc                                                                                    >  2:586610/1‑149 (MQ=255)

                                                                       ggCTGCCACGTCGCTGGGATTAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACCTGCTGTACCGAATCTTTTATCCGCTCCGCTCACCCACTgg                                                                              <  2:124662/149‑1 (MQ=255)

                                                                       ggCTGCCACGTCGCTGGGATTAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACCTGCTGTACCGAATCTTTTATCCGCTCCGCTCACCCACTgg                                                                              >  1:950398/1‑149 (MQ=255)

                                                                          tGCCACGTCGCTGGGATTAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACCTGCTGTACCGAATCTTTTATCCGCTCCGCTCACCCACTGGCGa                                                                           >  1:451446/1‑149 (MQ=255)

                                                                           gCCACGTCGCTGGGATTAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACCTGCTGTACCGAATCTTTTATCCGCTCCGCTCACCCACTGGCGaa                                                                          <  2:903677/149‑1 (MQ=255)

                                                                            ccACGTCGCTGGGATTAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCCCGGTCTGG‑AATGCACCTGCTGTACCGAATCTTTTATCCGCTCCGCTCACCCAGTGGCGaat                                                                         >  1:1005447/1‑148 (MQ=255)

                                                                            ccACGTCGCTGGGATTAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACCTGCTGTACAGAATCTTTTATCCGCTCCGCTCACCCACTGGCGAAg                                                                         <  2:927473/149‑1 (MQ=255)

                                                                                   gCTGGGATTAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACCTGCTGTACCGAATCTTTTATCCGCTCCGCTCACCCACTGGCGAAGGACGTCa                                                                  >  1:1282111/1‑149 (MQ=255)

                                                                                     tGGGATTAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACCTGCTGTACCGAATCTTTTATCCGCTCCGCTCACCCACTGGCGAAGGACGTCATc                                                                >  1:138325/1‑149 (MQ=255)

                                                                                          ttAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACCTGCTGTACCGAATCTTTTATCCGCTCCGCTCACCCACTGGCGAAGGACGTCATCCTTTc                                                           >  1:1119430/1‑149 (MQ=255)

                                                                                          ttAGGCGCGGGAATGGCACCAAAGATTGCCGTGGCGCTGGAGAACAAACCGCGCTTTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACCTGCTGTACCGAATCTTTTATCCGCTCCGCTCACCCACTGGCGAAGGACGTCATCCTTTc                                                           <  2:776181/149‑1 (MQ=255)

                                                                                            aGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACCTGCTGTACCGAATCTTTTATCCGCTCCGCTCACCCACTGGCGAAGGACGTCATCCTTTccc                                                         <  2:1458456/149‑1 (MQ=255)

                                                                                             ggCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACCTGCTGTACCGAATCTTTTATCCGCTCCGCTCACCCACTGGCGAAGGACGTCATCCTTTCCCt                                                        >  1:774757/1‑149 (MQ=255)

                                                                                             ggCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACCTGCTGTACCGAATCTTTTATCCGCTCCGCTCACCCACTGGCGAAGGACGTCATCCTTTCCCt                                                        <  2:47291/149‑1 (MQ=255)

                                                                                             ggCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACCTGCTGTACCGAATCTTTTATCCGCTCCGCTCACCCACTGGCGAAGGACGTCATCCTTTCCCt                                                        <  2:117504/149‑1 (MQ=255)

                                                                                              gcgcGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACCTGCTGTACCGAATCTTTTATCCGCTCCGCTCACCCACTGGCGAAGGACGTCATCCTTTCCCTg                                                       <  1:920150/149‑1 (MQ=255)

                                                                                                gcgGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACCTGCTGTACCGAATCTTTTATCCGCTCCGCTCACCCACTGGCGAAGGACGTCATCCTTTCCCTGAt                                                     >  1:392839/1‑149 (MQ=255)

                                                                                                         gCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACCTGCTGTACCGAATCTTTTATCCGCTCCGCTCCCCCACTGGCGAAGGACGGCATCCTTTACCTGATTTCCCTCGa                                            >  1:1289815/1‑149 (MQ=255)

                                                                                                         gCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACCTGCTGTACCGAATCTTTTATCCGCTCCGCTCACCCACTGGCGAAGGACGTCATCCTTTCCCTGATTTCCCTCGa                                            >  2:899110/1‑149 (MQ=255)

                                                                                                         gCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACCTGCTGTACCGAATCTTTTATCCGCTCCGCTCACCCACTGGCGAAGGACGTCATCCTTTCCCTGATTTCCCTCGa                                            <  2:926569/149‑1 (MQ=255)

                                                                                                         gCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACCTGCTGTACCGAATCTTTTATCCGCTCCGCTCACCCACTGGCGAAGGACGTCATCCTTTCCCTGATTTCCCTCGa                                            >  2:905221/1‑149 (MQ=255)

                                                                                                           aCCAAAGATTTCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACTGTCTGG‑AATGCACCTGCTGTACCGAATCTTTTATCCGCTCCGCTCACCCACTGGCGAAGGACGTCATCCTTTCCCTGATTTCCCTCGAtt                                          <  1:307950/149‑1 (MQ=255)

                                                                                                           aCCAAAGATTGCCTGTGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACCTGCTGTACCGAATCTTTTATCCGCTCCGCTCACCCACTGGCGAAGGACGTCATCCTTTCCCTGATTTCCCTCGAtt                                          <  2:84317/149‑1 (MQ=255)

                                                                                                           aCCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACCTGCTGTACCGAATCTTTTATCCGCTCCGCTCACCCACTGGCGAAGGACGTCATCCTTTCCCTGATTTCCCTCGAtt                                          <  2:1266601/149‑1 (MQ=255)

                                                                                                            ccAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACCTGCTGTACCGAATCTTTTATCCGCTCCGCTCACCCACTGGCGAAGGACGTCATCCTTTCCCTGATTTCCCTCGATTa                                         >  2:1273467/1‑149 (MQ=255)

                                                                                                              aaaGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACCTGCTGTACCGAATCTTTTATCCGCTCCGCTCACCCACTGGCGAAGGACGTCATCCTTTCCCTGATTTCCCTCGATTacg                                       >  2:863428/1‑149 (MQ=255)

                                                                                                               aaGATTGCCTGGGCGCGGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACCTGCTGTACCGAATCTTTTATCCGCTCCGCTCACCCACTGGCGAAGGACGTCATCCTTTCCCTGATTTCCCTCGATTacga                                      <  2:126939/149‑1 (MQ=255)

                                                                                                                aGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACCTGCTCTACCGAATCTTTTATCCGCTCCGCTCAACCACTGGCCAAGGACGTCATCCTTTCCCTGATTTCCCTCGATTacgac                                     >  2:339996/1‑149 (MQ=255)

                                                                                                                  aTTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACCTGCTGTACCGAATCTTTTATCCGCTCCGCTCACCCACTGGCGAAGGACGTCATCCTTTCCCTGATTTCCCTCGATTAcgacga                                   >  2:1430433/1‑149 (MQ=255)

                                                                                                                  aTTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACCTGCTGTACCGAATCTTTTATCCGCTCCGCTCACCCACTGGCGAAGGACGTCATCCTTTCCCTGATTTCCCTCGATTAcgacga                                   >  1:867961/1‑149 (MQ=255)

                                                                                                                       cTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACCTGCTGTACCGAATCTTTTATCCGCTCCGCTCACCCACTGGCGAAGGACGTCATCCTTTCCCTGATTTCCCTCGATTACGACGATACtt                              <  1:1347464/149‑1 (MQ=255)

                                                                                                                               tGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACCTGCTGTACCGAATCTTTTATCCGCTCCGCTCACCCACTGGCGAAGGACGTCATCCTTTCCCTGATTTCCCTCGATTACGACGATACTTTGATGGCt                      >  2:408081/1‑149 (MQ=255)

                                                                                                                                ggAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACCTGCTGTACCAAATCTTTTATCCGCTCCGCTCACCCACTGGCGAAGGACGTCATCCTTTCCCTGATTTCCCTCGATTACGACGATACTTTGATGGCTg                     <  1:716139/149‑1 (MQ=255)

                                                                                                                                   gaACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACCTGCTGTACCGAATCTTTTATCCGCTCCGCTCACCCACTGGCGAAGGACGTCATCCTTTCCCTGATTTCCCTCGATTACGACGATACTTTGATGGCTgccg                  >  2:177671/1‑149 (MQ=255)

                                                                                                                                    aaCAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACCTGCTGTACCGAATCTTTTATCCGCTCCGCTCACCCACTGGCGAAGGACGTCATCCTTTCCCTGATTTCCCTCGATTACGACGATACTTTGATGGCTgccgc                 >  2:502458/1‑149 (MQ=255)

                                                                                                                                     aCAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACCTGCTGTACCGAATCTTTTATCCGCTCCGCTCACCCACTGGCGAAGGACGTCATCCTTTCCCTGATTTCCCTCGATTACGACGATACTTTGATGGCTgccgcc                >  2:427311/1‑149 (MQ=255)

                                                                                                                                       aaaCCGCGCATTCCGGTGGTATGGATCCACGGTCTggaatgcgcggtttgttctccagcgcccaggcaatctttggtgccattcccgcgcctaatcccagcgacgtggcagccagactacaatatttgagaaagctgcgccgggtaacg               <  2:200218‑M2/149‑115 (MQ=255)

                                                                                                                                       aaaCCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACCTGCTGTACCGAATCTTTTATCCGCTCCGCTCACCCACTGGCGAAGGACGTCATCCTTTCCCTGATTTCCCTCGATTACGACGATACTTTGATGGCTGCCGCCgg              >  1:502177/1‑149 (MQ=255)

                                                                                                                                       aaaCCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACCTGCTGTACCGAATCTTTTATCCGCTCCGCTCACCCACTGGCGAAGGAAGTCATCCTTTCCCTGATTTCCCTCGATTACGACGATACTTTGATGGCTGCCGCCgg              >  1:411478/1‑149 (MQ=255)

                                                                                                                                         aCCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACCTGCTGTACCGAATCTTTTATCCGCTCCGCTCACCCACTGGCGAAGGACGTCATCCTTTCCCTGATTTCCCTCGATTACGACGATACTTTGATGGCTGCCGCCGGaa            <  1:1254038/149‑1 (MQ=255)

                                                                                                                                          ccGCGCATTCCGGTGGTATGGATCCACGGTCTggaatgcgcggtttgttctccagcgcccaggcaatctttggtgccattcccgcgcctaatcccagcgacgtggcagccagactacaatatttgagaaagctgcgccgggtaacgccc            <  2:579067‑M2/149‑118 (MQ=255)

                                                                                                                                          ccGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACCTGCTGTACCGAATCTTTTATCCGCTCCGCTCACCCACTGGCGAAGGACGTCATCCTTTCCCTGATTTCCCTCGATTACGACGATACTTTGATGGCTGCCGCCGGAAc           <  2:1083137/149‑1 (MQ=255)

                                                                                                                                            gcgcATTCCGGTGGTATGGATCCACGGTCTggaatgcgcggtttgttctccagcgcccaggcaatctttggtgccattcccgcgcctaatcccagcgacgtggcagccagactacaatatttgagaaagctgcgccgggtaacgccctg          <  2:1475656‑M2/149‑120 (MQ=255)

                                                                                                                                             cgcATTCCGGTGGTATGGATCCACGGTCTggaatgcgcggtttgttctccagcgcccaggcaatctttggtgccattcccgcgcctaatcccagcgacgtggcagccagactacaatatttgagaaagctgcgccgggtaacgccctga         <  1:1127046‑M2/149‑121 (MQ=255)

                                                                                                                                              gcATTCCagaccgtggatccataccaccggaatgcgcggtttgttctccagcgcccaggcaatctttggtgccattcccgcgcctaatcccagcgacgtggcagccagactacaatatttgagaaagctgcgccgggtaacgccctgac        >  1:1516168‑M1/1‑7 (MQ=255)

                                                                                                                                              gcATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACCTGCTGTACCGAATCTTTTATCCGCTCCGCTCACCCACTGGCGAAGGACGTCATCCTTTCCCTGATTTCCCTCGATTACGACGATACTTTGATGGCTGCCGCCGGAACCCAg       <  1:1261526/149‑1 (MQ=255)

                                                                                                                                               cATTCCagaccgtggatccataccaccggaatgcgcggtttgttctccagcgcccaggcaatctttggtgccattcccgcgcctaatcccagcgacgtggcagccagactacaatatttgagaaagctgcgccgggtaacgccctgacg       >  2:90492‑M1/1‑6 (MQ=255)

                                                                                                                                               cATTCCagaccgtggatccataccaccggaatgcgcggtttgttctccagcgcccaggcaatctttggtgccattcccgcgcctaatcccagcgacgtggcagccagactacaatatttgagaaagctgcgccgggtaacgccctgacg       >  2:925069‑M1/1‑6 (MQ=255)

                                                                                                                                                aTTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACCTGCTGTACCGAATCTTTTATCCGCTCCGCTCACCCACTGGCGAAGGACGTCATCCTTTCCCTGATTTCCCTCGATTACGACGATACTTTGATGGCTGCCGCCGGAACCCAGGc     >  2:855303/1‑149 (MQ=255)

                                                                                                                                                aTTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACCTGCTGTACCGAATCTTTTATCCGCTCCGCTCACCCACTGGCGAAGGACGTCATCCTTTCCCTGATTTCCCTCGATTACGACGATACTTTGATGGCTGCCGCCGGAACCCAGGc     <  2:1331993/149‑1 (MQ=255)

                                                                                                                                                aTTCCGGTGGTATGGATCCAAGGTCTGGAAATGCACCTGCTGTACCGAATCTTTTATCCGCTCCGCTCACCCACTGGCGAAGGACGTCATCCTTTCCCTGATTTCCCTCGATTACGACGATACTTTGATGGCTGCCGCCGGAACCCAgg      <  1:1480291/149‑1 (MQ=255)

                                                                                                                                                 ttCCagaccgtggatccataccaccggaatgcgcggtttgttctccagcgcccaggcaatctttggtgccattcccgcgcctaattccagcgacgtggcagccagactacaatatttgagaaagctgcgccgggtaacgccctgacgcc     >  1:1162792‑M1/1‑4 (MQ=255)

                                                                                                                                                 ttCCagaccgtggatccataccaccggaatgcgcggtttgttctccagcgcccaggcaatctttggtgccattcccgcgcctaatcccagcgacgtggcagccagactacaatatttgagaaagctgcgccgggtaacgccctgacgcc     <  1:1083137‑M1/149‑146 (MQ=255)

                                                                                                                                                    cagaccgtggatccataccaccggaatgcgcggtttgttctccagcgcccaggcaatctttggtgccattcccgcgcctaatcccagcgacgtggcagccagactacaatatttgagaaagctgcgccgggtaacgccctgacgccgca  <  1:458198‑M1/149‑149 (MQ=255)

GAGGAAACATTTTACCAGGCCATGCGGCGTCAGGGCGTTACCCGGCGCAGCTTTCTCAAATATTGTAGTCTGGCTGCCACGTCGCTGGGATTAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGG‑AATGCACCTGCTGTACCGAATCTTTTATCCGCTCCGCTCACCCACTGGCGAAGGACGTCATCCTTTCCCTGATTTCCCTCGATTACGACGATACTTTGATGGCTGCCGCCGGAACCCAGGCGGA  >  NC_000913/1032148‑1032443

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.