New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2258692 =81 (0.900)6 (0.070) 5/266 NT 7.4% coding (605/942 nt) psuK pseudouridine kinase
?NC_000913 2258736 = 71 (0.810)coding (561/942 nt) psuK pseudouridine kinase

AACATTAATAACATTGGTTTTGATCGGCGCAGACCAGCCACTTTCACCGCTGATATCGCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTATCCAG  >  NC_000913/2258544‑2258840
                                                                                                                                                    |                                                                                                                                                    
aaCATTAATAACATTGGTTTTGATCGGCGCAGACCAGCCACTTTCACCGCTGATATCGCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCAc                                                                                                                                                      <  1:440823/149‑1 (MQ=255)
 aCATTAATAACATTGGTTTTGATCGGCGCAGACCAGCCACTTTCACCGCTGATATCGCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACg                                                                                                                                                     <  1:206877/149‑1 (MQ=255)
  tcgcggactgtaatatcagtgaagaggcactggcatggattctggataatgccgccaacgtacccgtatttgtcgatccggtttcggcatggaaatgtgtcaaagtgcgcgaccgtctaaatcagatccacactctcaagccaaacCGc                                                                                                                                                    <  1:68286‑M1/3‑1 (MQ=255)
   aTTAATAACATTGGTTTTGCTCGGCGCAGACCAGCCACTTTCACCGCTGATATCGCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGcc                                                                                                                                                   >  2:341825/1‑149 (MQ=255)
   aTTAATAACATTGGTTTTGATCGGCGCAGACCAGCCACTTTCACCGCTGATATCGCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGcc                                                                                                                                                   <  2:106486/149‑1 (MQ=255)
    ttAATAACATTGGTTTTGATCGGCGCAGACCAGCCACTTTCACCGCTGATATCGCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGccc                                                                                                                                                  <  2:979091/149‑1 (MQ=255)
     taataaCCTTGGTTTTGAGCGGCGCAGACCAGCCACTTTCACCGCTGATTTCGCTGTAATAAACGCCGTCGCCGCCCATTCTCAATACCAGTCGGTTCAGGCCATGTTGATGGATCCAGGCAGCAACTTTTGCCACATCTTCACGCCCt                                                                                                                                                 <  2:1149288/149‑1 (MQ=255)
     taataaCATTGGTTTTGCTCGGCGCAGACCAGCAACTTTCACCGCTCATATCGCTGTAATAAACGCCGTCGCCGCCAATGATCAATACCAGTCGGTTCATGACATGTAGATGGAACCAGTCAGCAACTTTATCCACATCTTCActcact                                                                                                                                                 >  1:92381/1‑144 (MQ=255)
     taataaCATTGGTTTTGATCGGCGCAGTCCAGCCACTTTCGCCGCTGATATCGCTGTAATAAAAGCCGTCGCCGCCCATGCTCAATTCCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCAACATCTTCACGCCCt                                                                                                                                                 >  1:1230195/1‑149 (MQ=255)
     taataaCATTGGTTTTGATCGGCGCAGACCAGCCACTTTCACCGCTGATATCGCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCt                                                                                                                                                 <  2:1284469/149‑1 (MQ=255)
     taataaCATTGGTTTTGATCGGCGCAGACCAGCCACTTTCACCGCTGATATCGCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCt                                                                                                                                                 <  2:1138612/149‑1 (MQ=255)
        taaCATTGGTTTTGATCGGCGCAGACCAGCCACTTTCACCGCTGATATCGCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGAc                                                                                                                                              >  2:1356326/1‑149 (MQ=255)
        taaCATTGGTTTTGATCGGCGCAGACCAGCCACTTTCACCGCTGATATCGCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGAc                                                                                                                                              >  2:1284243/1‑149 (MQ=255)
        taaCATTGGTTTTGATCGGCGCAGACCAGCCACTTTCACCGCTGATATCGCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGAc                                                                                                                                              >  2:1372764/1‑149 (MQ=255)
         aaCATTGGTTTTGATCGGCGCAGACCAGCCACTTTCACCGCTGATATCGCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACa                                                                                                                                             >  1:1034762/1‑149 (MQ=255)
           cATTGGTTTTGATCGGCGCAGACCAGCCACTTTCACCGCTGATATCGCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAgc                                                                                                                                           <  2:1078992/149‑1 (MQ=255)
             ttGGTTTTGATCGGCGCAGACCAGCCACTTTCACCGCTGATATCGCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAgcgc                                                                                                                                         >  2:317916/1‑149 (MQ=255)
              tGGTTTTGATCGGCGCAGACCAGCCACTTTCACCGCTGATATCGCTGTAATAAACGCCGTAGCCACCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAAATTTTGCCAGATCTTCACGCCCAGACAGCGCa                                                                                                                                        >  1:973341/1‑149 (MQ=255)
                      aTCGGCGCAGACCAGCCACTTTCACCGCTGATATCGCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATcccccg                                                                                                                                >  1:623430/1‑146 (MQ=255)
                      aTCGGCGCAGACCAGCCACTTTCACCGCTGATATCGCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACt                                                                                                                                >  2:630263/1‑149 (MQ=255)
                      aTCGGCGCAGACCAGCCACTTTCACCGCTGATATCGCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACt                                                                                                                                >  2:614672/1‑149 (MQ=255)
                      aTCGGCGCAGACCAGCCACTTTCACCGCTGATATAGCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGATCCAGGCCGCACCGTTTGCCTCTTCTTCACGCCCGGACAGCGCACTCCCCCt                                                                                                                                >  1:304966/1‑149 (MQ=255)
                               gACCAGCCACTTTCACCGCTGATATCGCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTc                                                                                                                       >  2:1158404/1‑149 (MQ=255)
                                 ccAGCCACTTTCACCGCTGATATCGCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCg                                                                                                                     <  1:1467547/149‑1 (MQ=255)
                                  cAGCCACTTTCACCGCTGATATCGCTGTAATAAACGCCGTCGCCGCCCATGCTCAATAGCAGGCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGc                                                                                                                    <  2:238850/149‑1 (MQ=255)
                                     ccACTTTCACCGCTGATATCGCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTc                                                                                                                 <  2:562523/149‑1 (MQ=255)
                                     ccACTTTCACCGCTGATATCGCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTc                                                                                                                 >  1:1595184/1‑149 (MQ=255)
                                       aCTTTCACCGCTGATATCGCGGTCATAAACGCCGGCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCaa                                                                                                               <  2:280210/149‑1 (MQ=255)
                                        cTTTCACGGCTGATATCGCTGTAATAAACGCCGTCGCCGCCCATGCTCTATACGAGTCGGTTCAGGCCATGTTGAGGGAACCAGGCAGCAACTTTTGGCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAg                                                                                                              <  1:1042882/149‑1 (MQ=255)
                                         tttCACCGCTGATATCGCTGTAATAAACGCCGTCGCTGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGGCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCTCTTCAAgg                                                                                                             >  2:920031/1‑149 (MQ=255)
                                         tttCACCGCTGATATCGCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAgg                                                                                                             <  2:526090/149‑1 (MQ=255)
                                         tttCACCGCTGATATCGCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAgg                                                                                                             <  2:909011/149‑1 (MQ=255)
                                         tttCACCGCTGATATCGCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAgg                                                                                                             <  2:1136430/149‑1 (MQ=255)
                                           tCACCGCTGATATCGCTGTAATAAACGCCGTCGCCGCACATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCg                                                                                                           >  1:339299/1‑149 (MQ=255)
                                            tggataatgcagccaacgtacccgtatttgtcgatgcggtttcggaatggaaatgtggcatagtgcgcgaccgtctaaatcagatccacactctctagccaaacCGCCCTGACAGCGCAATCCAACTCAGGGTTTCCGCTTCAAGGCgg                                                                                                          >  1:373130‑M1/105‑149 (MQ=255)
                                             ggataatgccgccaacgtacccgtatttgtcgatccggtttcggcatggaaatgtgtcaaagtgcgcgaccgtctaaatcagatccacactctcaagccaaacCGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGt                                                                                                         >  2:594654‑M1/104‑149 (MQ=255)
                                               ataatgccgccaacgtacccgtatttgtcgatccgggttcggcatggaaatgtgtcaaagtgcgcgaccgtctaaatcagttccacactctcaaggcaaacCGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGttt                                                                                                       >  2:141235‑M1/102‑149 (MQ=255)
                                                 gtGATATCGCTGTAATAAACGCCGTCGCCGCCGATTCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCATCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTgg                                                                                                     <  1:268019/148‑1 (MQ=255)
                                                 cTGATATCGCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTgg                                                                                                     <  1:1273204/149‑1 (MQ=255)
                                                  tGATTTCGCTGTACTATACGCCGGCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGc                                                                                                    <  1:276529/149‑1 (MQ=255)
                                                   tgccgccaacgtacccgtatttgtcgatccggtatcggcagggaaatgggtcaaagtgcgcgaccgtctaaatcagatccacactctcaagccaaacCGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCt                                                                                                   >  1:306527‑M1/98‑149 (MQ=255)
                                                   ggccgcccacggacccgtatttgtcgagccggtgtcggcatggaaatgtgtcaaagtgcgcgaccgtctacatcagatccacactctcaagccaaacCGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCt                                                                                                   >  1:302010‑M1/98‑149 (MQ=255)
                                                     tatCGCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTg                                                                                                 <  1:1284243/149‑1 (MQ=255)
                                                        cGCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTgaga                                                                                              <  2:730075/149‑1 (MQ=255)
                                                        cGCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTgaga                                                                                              <  1:837820/149‑1 (MQ=255)
                                                           tGTAATATACGCCGTCGCCGCCCATGCTAAATACCAGTTGTTTTATTACATTTTGTTGGAACCAGGATTTATCTTTTGTCAAATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGATTCAAGGCGGTTTGGCTTGAGAgtg                                                                                           <  2:6340/149‑1 (MQ=255)
                                                           tGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAgtg                                                                                           >  1:335521/1‑149 (MQ=255)
                                                             taataaACGCCGTCTCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGtgtg                                                                                         <  2:1434563/149‑1 (MQ=255)
                                                               ataaACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGa                                                                                       <  1:216079/149‑1 (MQ=255)
                                                                taaACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCCTGTTGATGGAACCAGGCAGCAACTATTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGAt                                                                                      <  2:1120620/149‑1 (MQ=255)
                                                                cccgtatttgtcgatccggtttcggcatggaaatgtgtcaaagtgcgcgaccgtctaaatcagatccacactctcaagccaaacCGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGAt                                                                                      >  1:1000013‑M1/85‑149 (MQ=255)
                                                                   aCGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTg                                                                                   >  2:1082151/1‑149 (MQ=255)
                                                                    cGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGa                                                                                  <  1:390408/149‑1 (MQ=255)
                                                                           gccgccCCTCCTCAAAACCAGTCGGATCAGGCCCTGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGAc                                                                           <  2:1133190/149‑1 (MQ=255)
                                                                             cgccCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACgg                                                                         >  2:1295825/1‑149 (MQ=255)
                                                                                ccATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTcg                                                                      >  1:1577697/1‑149 (MQ=255)
                                                                                ccATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTcg                                                                      >  1:1408625/1‑149 (MQ=255)
                                                                                 cATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTcgc                                                                     >  1:1465025/1‑149 (MQ=255)
                                                                                     cTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGGGGATCTGATTTAGACGGTCGCGCAc                                                                 <  1:788812/149‑1 (MQ=255)
                                                                                      tCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGATAGTGTGGATCTGATTTAGACGGTCGCGAAca                                                                >  2:1183694/1‑148 (MQ=255)
                                                                                      tCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACt                                                                >  1:1186710/1‑149 (MQ=255)
                                                                                      tCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCAGACAGCGCAATCCCACTCAGGGTTACCGCTTCAAGGCGGTTTTGCTTGAGAGTGTGGATCTGAATTAGACCGTCGCTCACt                                                                >  2:777499/1‑149 (MQ=255)
                                                                                        aaTTCCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCTACATCTTAACTCGCTGAAAGCGCAATCCCTATCATGTTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGTATCTGATTTAGACGGTCGCGCACttt                                                              <  2:92381/149‑1 (MQ=255)
                                                                                        aaTACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCGGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACttt                                                              >  1:490046/1‑149 (MQ=255)
                                                                                        aaTACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACttt                                                              <  2:226298/149‑1 (MQ=255)
                                                                                        aaTACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACttt                                                              >  2:995666/1‑149 (MQ=255)
                                                                                        aaTACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACttt                                                              <  1:1356326/149‑1 (MQ=255)
                                                                                            ccAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGaca                                                          <  1:363202/149‑1 (MQ=255)
                                                                                             gcgTCGGTTCAGGCCATGTTGAAGGAACCAGGCAGCAACGTTAGCCAAATCTTCCCGCCCGGACATCGCACTCGCACTCAGGGTTTCCGCTTACAGGCTGTTTGTCCTGTGAGTGGGGATCTGATTTAGAAGGTAGCGCACTTTGagac                                                         <  2:1169758/147‑1 (MQ=255)
                                                                                                 cGGTTCAGGCCATGGTGATGGAACCAGGCAGCAACTTTAGCCACAGCTTCACGCCCTGCCAGCGCAATCCCCCTCCGGGTGTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACAttt                                                     <  1:975666/149‑1 (MQ=255)
                                                                                                  ggTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTc                                                    <  2:1408625/149‑1 (MQ=255)
                                                                                                  ggTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTc                                                    >  1:89049/1‑149 (MQ=255)
                                                                                                     tCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCGACATCTTCACGCCCTGACAGCGCAATCCCCCTCAGGGATTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACTCATTTCCAt                                                 <  1:284945/149‑1 (MQ=255)
                                                                                                        ggCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGcc                                              <  2:1034762/149‑1 (MQ=255)
                                                                                                        ggCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGcc                                              <  2:335521/149‑1 (MQ=255)
                                                                                                        ggCCATGGTGATGGAACGAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGcc                                              <  2:973341/149‑1 (MQ=255)
                                                                                                             tGTAGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGTCAGCGCTATCCCACTCATGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAAc                                         <  2:995443/149‑1 (MQ=255)
                                                                                                               ttGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCg                                       >  1:1345054/1‑149 (MQ=255)
                                                                                                                 gATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCCCTCAGGGTTTCCGCGTCAAGGCGGGTTGGCTTGCGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGCCACATTTCCATGCCGAAACCggc                                     >  1:818890/1‑148 (MQ=255)
                                                                                                                  aTGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGAt                                    <  1:630263/149‑1 (MQ=255)
                                                                                                                  aTGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGAt                                    <  1:614672/149‑1 (MQ=255)
                                                                                                                  aTGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGAt                                    >  1:1327432/1‑149 (MQ=255)
                                                                                                                      aaCCAGTCAGCAACTTTTGCCAGATCTTCACGCCCTGACAGAGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTCGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATTCCGAAACCGGATCGAc                                <  1:278014/149‑1 (MQ=255)
                                                                                                                      aaCCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGAc                                <  2:1141149/149‑1 (MQ=255)
                                                                                                                        ccAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACATCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGATTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGaaaa                              <  2:339299/149‑1 (MQ=255)
                                                                                                                         cAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACCGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACaaa                             >  1:1222748/1‑149 (MQ=255)
                                                                                                                          aGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAAt                            <  1:1177847/149‑1 (MQ=255)
                                                                                                                              agcaACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCAGAAACATGATCGACAAATACgg                        >  2:434394/1‑149 (MQ=255)
                                                                                                                                caACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGCACCCGGATCGACAAATACGGGt                      >  2:408620/1‑149 (MQ=255)
                                                                                                                                caACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACgttg                      >  1:1068545/1‑146 (MQ=255)
                                                                                                                                 aaCTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTa                     <  2:1465025/149‑1 (MQ=255)
                                                                                                                                  aCTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTAc                    <  1:1158404/149‑1 (MQ=255)
                                                                                                                                         ccACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTggcg             >  2:68286/1‑149 (MQ=255)
                                                                                                                                             aTCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCAt         <  1:1372764/149‑1 (MQ=255)
                                                                                                                                                ttCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTAt      >  2:1491182/1‑149 (MQ=255)
                                                                                                                                                   aCGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTATCCa   <  1:317916/149‑1 (MQ=255)
                                                                                                                                                   aCGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTATCCa   >  1:79733/1‑149 (MQ=255)
                                                                                                                                                   aCGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGCTCGCGCACTTTGACACATTTCCATGCAGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTATCCa   >  2:286445/1‑149 (MQ=255)
                                                                                                                                                    CGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTATCCAg  >  2:490046‑M1/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
AACATTAATAACATTGGTTTTGATCGGCGCAGACCAGCCACTTTCACCGCTGATATCGCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTATCCAG  >  NC_000913/2258544‑2258840

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.