New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 384831273 (0.810)4 (0.050) 4/256 NT 5.3% coding (313/1320 nt) uhpC membrane protein regulates uhpT expression
?NC_000913 = 3848339 76 (0.900)coding (286/1320 nt) uhpC membrane protein regulates uhpT expression

GCGCTCGGTACGTGAATACCAGGCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGAAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGACAATGCCGGAGACAAACTTCGACACGCCATAGGTAATGTAAAACAGGGTCGCTAACAGGCCGATATCGCTACGGCTGAGCACGCCGTTAGCAAGGAT  >  NC_000913/3848169‑3848459
                                                                                                                                               |                                                                                                                                                   
gcgcTCGGTACGTGAATACCAGGCCTTTAACAGACGCGCACACACCGGTTAACCCCATCCCTGGAAAAAGGCGTTCATCACCCAGAGCACGGCAAACTCCCATAGCTACGTCGAGAAGCCAAACAGAATGTTGATTATGCCCGTGTCGa                                                                                                                                                <  2:500096/149‑1 (MQ=255)
gcgcTCGGGACGGGAATACCAGGCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGAAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGa                                                                                                                                                <  2:506200/149‑1 (MQ=255)
    tCGGTACGTGAATACCAGGCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGAAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAg                                                                                                                                            <  2:693213/149‑1 (MQ=255)
          cGTGAATACCAGGCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGAAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTAt                                                                                                                                      >  2:1038140/1‑149 (MQ=255)
          cGTGAATACCAGGCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGAAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTAt                                                                                                                                      >  1:1200135/1‑149 (MQ=255)
              aaTACCAGGCCGTTAACAGACGCGCCCACACCGGTGAACCCCAGCCCTGGAAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATcccc                                                                                                                                  >  1:1054214/1‑149 (MQ=255)
              aaTACCAGGCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGAAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATccct                                                                                                                                  <  1:1038140/149‑2 (MQ=255)
                   cAGGCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGAAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATaaa                                                                                                                             >  2:35914/1‑149 (MQ=255)
                    aGGCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGAAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATaaaa                                                                                                                            >  1:839593/1‑149 (MQ=255)
                        cGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGAAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAac                                                                                                                        >  1:526316‑M2/1‑147 (MQ=255)
                        cGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGAAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAACCCTATCCCCATAAAATAac                                                                                                                        >  2:921919‑M2/1‑147 (MQ=255)
                           tAACAGACTCGCACACACCGGTGAACCCCAGCCCTGGAAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAATCCAAACAGAATGTTGATAATTCCCGTGGCGATAAGCCCTATCCCCATAAAATAacggg                                                                                                                     >  2:1224577‑M2/1‑144 (MQ=255)
                           tAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGAAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTtattttatggggatagggcttatcgccacggg                                                                                                                     <  1:677229‑M1/149‑33 (MQ=255)
                             aCAGACGCGCACACACCGGTGAACCCCAGCCCTGGAAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCGATCCCCATAAAATAacgggca                                                                                                                   <  1:1284‑M2/149‑8 (MQ=255)
                                gACGCGCACACACCGGTGAACCCCAGCCCTGGAAAAAGGCGTTCAGCACCCAGCGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCGATCCCCATAAAATAACGGGCAttt                                                                                                                >  2:1271394/1‑149 (MQ=255)
                                gACGCGCACACACCGGTGAACCCCAGCCCTGGAAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTtattttatggggatagggcttatcgccacgggcatta                                                                                                                <  2:1089753‑M1/149‑38 (MQ=255)
                                  cgcgCACACACCGGTGAACCCCAGCCCTGGAAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGa                                                                                                              <  1:1280963/149‑1 (MQ=255)
                                  cgcgCACACACCGGTGAACCCCAGCCCTGGAAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGa                                                                                                              <  2:804780/149‑1 (MQ=255)
                                  cgcgCACACACCGGGTAACCCCAGCCCTGGAAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCACACAGAATGTTGATAATGCCCGTtattttatggggatagggcttatcgccacgggcattatc                                                                                                              <  2:801212‑M1/149‑40 (MQ=255)
                                    cgcTCACACCGGTGAACCCCAGCCCTGGAAAAAGGCGTTCAGCACCCAGAGCACGGCAATCGCCCATAGCGACGTCGAGAAGCCAAACAGATTGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGc                                                                                                            <  1:131536/149‑1 (MQ=255)
                                    cgcACACACCGGTGAACCCCAGCCCTGGAAACAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTTATAATGCCCGTtattttatggggatagtgcttatcgccacgggcattatcaa                                                                                                            <  1:176729‑M1/149‑42 (MQ=255)
                                    cgcACACACCGGTGAACCCCAGCCCTGGAAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGc                                                                                                            >  1:398405/1‑149 (MQ=255)
                                      cacacaCCGGTGAACCCCAGCCCTGGAAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGa                                                                                                          >  2:1369554/1‑149 (MQ=255)
                                       acacacCGGTGAACCCCAGCCCTGGAAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGCGCGAt                                                                                                         >  1:1514910/1‑149 (MQ=255)
                                         acacCGGTGAACCCCAGCCCTGGAAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATc                                                                                                                                     >  2:322366/1‑119 (MQ=255)
                                         acacCGGTGAACCCCAGCCCTGGAAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATc                                                                                                                                     <  1:322366/119‑1 (MQ=255)
                                         acacCGGTGAACCCCAGCCCTGGAAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCg                                                                                                       >  1:1049455/1‑149 (MQ=255)
                                              ggTGAACCCCAGCCCTGGAAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGAc                                                                                                  <  2:459552/149‑1 (MQ=255)
                                              ggTGAACCCCAGCCCTGGAAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGGCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGAc                                                                                                  <  2:882499/149‑1 (MQ=255)
                                                 taaCCCCAGCCCTGGAAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGACAAt                                                                                               <  1:1441337/148‑1 (MQ=255)
                                                  aaCCCCAGCCCTGGAAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGACAATg                                                                                              >  2:239507/1‑149 (MQ=255)
                                                     cccAGCCCTGGAAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGACAATGCCg                                                                                           >  1:589711/1‑149 (MQ=255)
                                                     cccAGCCCTGGAAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGACAATGCCg                                                                                           >  1:726328/1‑149 (MQ=255)
                                                         gCCCTGGAAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGACAATGCCGgaga                                                                                       <  1:1544472/149‑1 (MQ=255)
                                                         gCCCTGGAAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGACAATGCCGgaga                                                                                       <  1:1114680/149‑1 (MQ=255)
                                                          cccTGGAAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGACAATGCCGGAGAc                                                                                      >  2:210068/1‑149 (MQ=255)
                                                           ccTGGAAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGACAATGCCGGAGACa                                                                                     >  2:1360798/1‑149 (MQ=255)
                                                           ccTGGAAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGACAATGCCGGAGACa                                                                                     >  1:785108/1‑149 (MQ=255)
                                                            cTGGAAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGACAATGCCGGAGACaa                                                                                    >  2:1468257/1‑149 (MQ=255)
                                                                aaaaaGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAATTAACGGGCATTTGAGCGATCGATGAAAATGACGGAGACTAACtt                                                                                >  2:307056/1‑149 (MQ=255)
                                                                 aaaaGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGACAATGCCGGAGACAAACTTc                                                                               <  1:568682/149‑1 (MQ=255)
                                                                 aaaaGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGACAATGCCGGAGACAAACTTc                                                                               <  2:421089/149‑1 (MQ=255)
                                                                 aaaaGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGACAATGCCGGAGACAAACTTc                                                                               >  2:169401/1‑149 (MQ=255)
                                                                  aaaGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGACAATGCCGGAGACAAACTTCg                                                                              <  2:600172/149‑1 (MQ=255)
                                                                        gTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGACAATGCCGGAGACAAACTTCGACACGc                                                                        <  1:1294513/149‑1 (MQ=255)
                                                                         ttCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGACAATGCCGGAGACAAACTTCGACACGcc                                                                       >  1:561470/1‑149 (MQ=255)
                                                                            aGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGACAATGCCGGAGACAAACTTCGACACGCCATa                                                                    >  2:573616/1‑149 (MQ=255)
                                                                            aGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGACAATGCCGGAGACAAACTTCGACACGCCATa                                                                    <  2:15142/149‑1 (MQ=255)
                                                                                cccAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGAGCGCTGACAATGCCGGAGACAAACTTCGACACGCCATAGGTa                                                                <  2:1296132/149‑1 (MQ=255)
                                                                                 ccAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCAGAAAATAACGGGCATTTGAGCGATCGCTGACAATGCCGGAGACAAACTTCGACACGCCATAGGTaa                                                               >  1:1462579/1‑149 (MQ=255)
                                                                                  cAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCACCATAAAATAACGGGCATTTGAGCGATCGCTGACAATGCCGGAGACAAACTTCGACACGCCATAGGTAAt                                                              <  2:1003318/149‑1 (MQ=255)
                                                                                   agagCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGACAATGCCGGAGACAAACTTCGACACGCCATAGGTAATg                                                             >  1:714048/1‑149 (MQ=255)
                                                                                       cACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGACAATGCCGGAGACAAACTTCGACACGCCATAGGTAATGTaaa                                                         <  2:740747/149‑1 (MQ=255)
                                                                                        aCGGCAAACGCCCATAGCGACTTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGACAATGCCGGAGACAAACTTCGACACGCCATAGGTAATGTaaaa                                                        <  2:785108/149‑1 (MQ=255)
                                                                                        aCGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGACAATGCCGGAGACAAACTTCGACACGCCATAGGTAATGTaaaa                                                        <  1:1369554/149‑1 (MQ=255)
                                                                                           gCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCATATCCCCATAAAAAAACGGGCATTTGAGCGATCGCTGACAATGCCGGAGACAAACTTCGACACGCCATAGGTAATGTAAAACAg                                                     >  2:80494/1‑149 (MQ=255)
                                                                                                   ccATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGACAATGCCGGAGACAAACTTCGACACGCCATAGTTAATGTAAAACAGGTTCGCTa                                             >  2:1065419/1‑149 (MQ=255)
                                                                                                   ccATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGACAATGCCGGAGACAAACTTCGACACGCCATAGGTAATGTAAAACAGGGTCGCTa                                             >  2:1368487/1‑149 (MQ=255)
                                                                                                   ccATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGACAATGCCGGAGACAAACTTCGACACGCCATAGGTAATGTAAAACAGGGTCGCTa                                             >  1:638966/1‑149 (MQ=255)
                                                                                                    cATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGACAATGCCGGAGACAAACTTCGACACGCCATAGGTAATGTAAAACAGGGTCGCTaa                                            >  1:1117108/1‑149 (MQ=255)
                                                                                                    cATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAACCCCTATACCCATAAAAAAACGGGCATTTGAGCGATAGCTGACAAAGCCGGACACAAAAATCGACACGCCATAGGTAATGTAAAACAGGGTCGCTaa                                            >  1:1291349/1‑149 (MQ=255)
                                                                                                      tAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGACAATGCCGGAGACAAACTTCGACACGCCATAGGTAATGTAAAACAGGGTCGCTAACa                                          <  1:239507/149‑1 (MQ=255)
                                                                                                        gCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGACAATGCCGGAGACAAACTTCGACACGCCATAGGTAATGTAAAACAGGGTCGCTAACAgg                                        >  2:591529/1‑149 (MQ=255)
                                                                                                         cGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGACAATGCCGGAGACAAACTTCGACACGCCATAGGTAATGTAAAACAGGGTCGCTaa                                            >  2:1459269/1‑144 (MQ=255)
                                                                                                         cGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGACAATGCCGGAGACAAACTTCGACACGCCATAGGTAATGTAAAACAGGGTCGCTaa                                            <  1:1459269/144‑1 (MQ=255)
                                                                                                         cGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGACAATGCCGGAGACAAACTTCGACACGCCATAGGTAATGTAAAACAGGGTCGCTAACAGGc                                       <  1:414242/149‑1 (MQ=255)
                                                                                                          gACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGACAATGCCGGAGACAAACTTCGACACGCCATAGGTAATGTAAAACAGGGTCGCTAACAGGcc                                      >  1:260309/1‑149 (MQ=255)
                                                                                                          gACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGAAAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGACAATGCCGGAGACAAACTTCGACACGCCATAGGTAATGTAAAACAGGGTCGCTAACAGGcc                                      <  2:1450328/149‑1 (MQ=255)
                                                                                                             gTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGACAATGCCGGAGACAAACTTCGACACGCCATAGGTAATGTAAAACAGGGTCGCTAACAGGCCGat                                   >  2:557491/1‑149 (MQ=255)
                                                                                                              tCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGACAATGCCGGGGACAAACTTCGACACGCCATAGGTAATGTAAAACAGGGTCGCTAACAGGCCGata                                  >  1:761970/1‑149 (MQ=255)
                                                                                                               cGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGACAATGCCGGAGACAAACTTCGACACGCCATAGGTAATGTAAAACAGGGTCGCTAACAGGCCGatat                                 <  1:35914/149‑1 (MQ=255)
                                                                                                                gagaAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACTGGCATTTGAGCGATCGCTGACAATGCCGGAGACAAACTTCGACACGCCATAGGTAATGTAAAACAGGGTCGCTAACAGGCCGATATc                                <  2:1054214/149‑1 (MQ=255)
                                                                                                                gagaAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGACAATGCCGGAGACAAACTTCGACACGCCATAGGTAATGTAAAACAGGGTCGCTAACAGGCCGATATc                                >  1:562475/1‑149 (MQ=255)
                                                                                                                    aGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGACAATGCCGGAGACAAACTTCGACACGCCATAGGTAATGTAAAACAGGGTCGCTAACAGGCCGATATCGCTa                            >  1:1547902/1‑149 (MQ=255)
                                                                                                                     gCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGACAATGCCGGAGACAAACTTCGACACGCCATAGGTAATGTAAAACAGGGTCGCTAACAGGCCGATATCGCTAc                           >  1:1450010/1‑149 (MQ=255)
                                                                                                                        aaaCAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGACAATGCCGGAGACAAACTTCGACACGCCATAGGTAATGTAAAACAGGGTCGCTAACAGGCCGATATCGCTACGGc                        >  2:1427709/1‑149 (MQ=255)
                                                                                                                        aaaCAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGACAATGCCGGAGACAAACTTCGACACGCCATAGGTAATGTAAAACAGGGTCGCTAACAGGCCGATATCGCTACGGc                        >  1:408549/1‑149 (MQ=255)
                                                                                                                           aaGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGACAATGCCGGAGACAAACTTCGACACGCCATAGGTAATGTAAAACAGGGTCGCTAACAGGCCGATATCGCTACGGCTGa                     <  1:169401/148‑1 (MQ=255)
                                                                                                                                  ttGATAATGCCCGTGGCGATAAGCACTATCCCCATAAAATAacgggcattataaacattctgtttggcttctcgacgtcgctatgggcgtttgccgtgctctgggtgctgaacgcctgtttccagggctggggttcaccggtgtgtgcg              <  1:176729‑M2/149‑109 (MQ=255)
                                                                                                                                    taTAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGACAATGCCGGAGACAAACTTCGACACGCCATAGGTAATGTAAAACAGGGTCGCTAACAGGCCGATATCGCTACGGCTGAGCACGCCGt            <  2:1200135/148‑1 (MQ=255)
                                                                                                                                    gATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAacgggcattatcaacattctgtgtggcttctcgacgtcgctatgggcgtttgccgtgctctgggtgctgaacgcctttttccagggctggggttacccggtgtgtgcgcg            <  2:801212‑M2/149‑111 (MQ=255)
                                                                                                                                    gATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGACAATGCCGGAGACAAACTTCGACACGCCATAGGTAATGTAAAACAGGGGCGCTAACAGGCCGATATCGCTACGGCTGAGCACGCCGt            <  1:22779/149‑1 (MQ=255)
                                                                                                                                      tAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAacgggcattatcaacattctgtttggcttctcgacgtcgctatgggcgtttgccgtgctctgggtgctgaacgcctttttccagggctggggttcaccggtgtgtgcgcgtc          <  2:1089753‑M2/149‑113 (MQ=255)
                                                                                                                                       aaTGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGACAATGCCGGAGACAAACTTCGACACGCCATAGGTAATGTAAAACAGGGTCGCTAACAGGCCGATATCGCTACGGCTGAGCACGCCGTTAg         >  1:1287295/1‑149 (MQ=255)
                                                                                                                                         tGCCCGTtattttatggggatcgggcttatcgccacgggcattatcaacattctgtttggcttctcgacgtcgctatgggcgtttgccgtgctctgggtgctgaacgcctttttccagggctggggttcaccggtgtgtgcgcgtctgt       <  1:1284‑M1/149‑143 (MQ=255)
                                                                                                                                          gCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGACAATGCCGGAGACAAACTTCGACACGCCATAGGTAATGTCAAACAGGGTCGCTAACAGGCCGATATCGCTACGGCTGAGCACGCCGTTAGCaa      <  2:370299/149‑1 (MQ=255)
                                                                                                                                          gCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGACAATGCCGGAGACAAACTTCGACACGCCATAGGTAATGTAAAACAGGGTCGCTAACAGGCCGATATCGCTACGGCTGAGCACGCCGTTAGCaa      <  1:210068/149‑1 (MQ=255)
                                                                                                                                           cccGTtattttatggggatagggcttatcgccacgggaattatcaacattctgtttggattctcgacgtcgctatgggcgtttgccgtgctctgggtgctgaacgcctttttccagggctggggttcaccggtgtgtgcgagtctgtta     >  2:1224577‑M1/1‑5 (MQ=255)
                                                                                                                                           cccGTGGCGATAAGCCCTATCCCCATAAAATAacgggcattatcaacattctgtttggcttctcgacgtcgctatgggcgtttgccgtgctctgggtgctgaacgcctttttccagggctggggttcaccggtgtgtgcgcgtctgtta     <  1:677229‑M2/149‑118 (MQ=255)
                                                                                                                                              gTtattttatggggatagggtttatcgccacgggcattatcaacattctgtttggcttctcgacgtcgctatgggcgtttgccgtgctctgggtgctgaacgcctttttccagggctggggttcaccggtgtgtgcgcgtctgttaacg  >  2:921919‑M1/1‑2 (MQ=255)
                                                                                                                                              gTtattttatggggatagggcttatcgccacgggcattatcaacattctgtttggcttctcgacgtcgctatgggcgtttgccgtgctctgggtgctgaacgcctttttccagggctggggttcaccggtgtgtgcgcgtctgttaacg  >  1:526316‑M1/1‑2 (MQ=255)
                                                                                                                                               |                                                                                                                                                   
GCGCTCGGTACGTGAATACCAGGCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGAAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGACAATGCCGGAGACAAACTTCGACACGCCATAGGTAATGTAAAACAGGGTCGCTAACAGGCCGATATCGCTACGGCTGAGCACGCCGTTAGCAAGGAT  >  NC_000913/3848169‑3848459

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.