BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4098917	90 (1.000)	5 (0.060)	5/262	NT	5.6%	coding (272/849 nt)	rhaR	transcriptional activator of rhaSR
*	?	NC_000913	= 4098978	81 (0.940)	5 (0.060)	5/262	NT	5.6%	coding (333/849 nt)	rhaR	transcriptional activator of rhaSR

Only 100 of 119 total aligned reads displayed.

GTGATTGTCTGGCGCGGTAATGGCCTGCATGTACTCAACGATCGCCCTTATCGCATTACCCGTGGCGATCTCTTTTACATTCATGCTGACGATAAACACTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGATTTAACGCCAGCGCAGGGCAACCACACTGGCGCTTAGGTAGCATGGGGATGGCGCAGGCGCGGCAGGTTATCGGTCAGCTTGAGCATGAAAGTAGTCAGCAT  >  NC_000913/4098769‑4099065

gTGATTGTCTGGCGCGGTAATGGCCTGCATGTACTCAACGATCGCCCTTATCGCATTACCCGTGGCGATCTCTTTTACATTCATGCTGAAGATAAACACTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCC                                                                                                                                                      <  1:1019243‑M1/149‑1 (MQ=255)

     tGTCTGGCGCGGTAATGGCCTGCATGTACTCAACGATCGCCCTTATCGCATTACCCGTGGCGATCTCTTTTACATTCATGCTGACGATAAACACTCCTACGCTTCCGATAACGATCTGGTTTTGCGGAATATTATTTATTGCCCGGAGc                                                                                                                                                 >  2:1306603/1‑149 (MQ=255)

      gTCTGGCGCGGTAATGGCCTGCATGTACTCAACGATCGCCCTTATCGCATTACCCGTGGCGATCTCTTTTACATTCATGCTGACGATAAACACTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCtgcgct                                                                                                                                                >  2:486140‑M1/1‑143 (MQ=255)

        atGGCGCGGTAATGGCCTGCATGTACTCAACGATCGCCCTTATCGCATTAACCGTGGCGATCTCTTTTACATTCATGCTGACGATAAACACTCCTACGCTTCCGTTAACGATCTGGTTTTGCATAATATTATTTATTGCCCGGAGCGTc                                                                                                                                              <  1:374197/148‑1 (MQ=255)

             gcgGTAATGGCCTGCATGTACTCAACGATCGCCCTTATCGCATTACCCGTGGCGATCTCTTTTACATTCATGCTGACGATAAACACTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAg                                                                                                                                         <  1:777339/149‑1 (MQ=255)

             gcgGTAATGGCCTGCATGTACTCAACGATCGCCCTTATCGCATTACCCGTGGCGATCTCTTTTACATTCATGCTGACGATAAACACTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAg                                                                                                                                         <  2:1389748/149‑1 (MQ=255)

             gcgGTAATGGCCTGCATGTACTCAACGATCGCCCTTATCGCATTACCCGTGGCGATCTCTTTTACATTCATGCTGACGATAAACACTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAg                                                                                                                                         >  2:403208/1‑149 (MQ=255)

               ggTAATGGCCTGCATGTACTCAACGATCGCCCTTATCGCATTACCCGTGGCGATCTCTTTTACATTCATGCTGACGATAAACACTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCt                                                                                                                                       <  2:596366/149‑1 (MQ=255)

                  aaTGGCCTGCATGTACTCAACGATCGCCCTTATCGCATTACCCGTGGCGATCTCTTTTACATTCATGCTGACGATAAACACTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGaa                                                                                                                                    <  1:1521377/149‑1 (MQ=255)

                   aTGGCCTGCATGTACTCAACGATCGCCCTTATCGCATTACCCGTGGCGATCTCTTTTACATTCATGCTGACGATAAACACTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAAt                                                                                                                                   <  1:1500982/149‑1 (MQ=255)

                     ggCCTGCATGTACTCAACGATCGCCCTTATCGCATTACCCGTGGCGATCTCTTTTACATTCATGCTGACGATAAACACTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCt                                                                                                                                 >  1:942516/1‑149 (MQ=255)

                        cTGCATGTACTCAACGATCGCCCTTATCGCATTACCCGTGGCGATCTCTTTTACATTCATGCTGACGATAAACACTCCTACGCTTCCGTTAACGCTCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGa                                                                                                                              >  1:971093/1‑149 (MQ=255)

                         tGCATGTACTCAACGATCGCCCTTATCGCATTACCCGTGGCGATCTCTTTTACATTCATGCTGACGATAAACACTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGAc                                                                                                                             <  2:150681/149‑1 (MQ=255)

                         ggCATGTACTCAACGATCGCCCTTATCGCATTACCCGTGGCGATCTCTTTTACATTCATGCTGACGATAAACACTCCTACGCTTCCGGTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCGGAATCTTGAc                                                                                                                             <  2:1166753/148‑1 (MQ=255)

                          gCATGTACTCAACGATCGCCCTTATCGCATTACCCGTGGCGATCTCTTTTACATTCATGCTGACGATAAACACTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACt                                                                                                                            <  2:592117/149‑1 (MQ=255)

                             tGTACTCAACGATCGCCCTTATCGCATTACCCGTGGCGATCTCTTTTACATTCATGCTGACGATAAACACTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGc                                                                                                                         <  2:136574/149‑1 (MQ=255)

                                aCTCCACGATCGCCATTATCTCATTACCCGTGGCGATCTCTTTTACATTCATGCTGACGATAAACACTCCTACCCTTCCGTTAACGATCTGGTTTTGCCGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAgg                                                                                                                      <  2:852582/149‑1 (MQ=255)

                                aCTCAACGATCGCCCTTATCGCATTACCCGTGGCGATCTCTTTTACATTCATGCTGACGATAAACACTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAgg                                                                                                                      >  1:745282/1‑149 (MQ=255)

                                  tCAACGATCGCCCTTATCGCATTACCCGTGGCGATCTCTTTTACATTCATGCTGACGATAAACACTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAgggg                                                                                                                    >  1:216693/1‑149 (MQ=255)

                                  tCAACGATCGCCCTTATCGCATTACCCGTGGCGATCTCTTTTACATTCATGCTGACGATAAACACTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAgggg                                                                                                                    >  2:848486/1‑149 (MQ=255)

                                  tCAACGATCGCCCTTATCGCATTACCCGTGGCGATCTCTTTTACATTCATGCTGACGATAAACACTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAgggg                                                                                                                    >  2:745120/1‑149 (MQ=255)

                                    aaCGATCGCCCTTATCGCATTACCCTTGGCGATCTCTTGTACATTCATGCTGACGAGAAACAATCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAAATTTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGCCTGGCTGGGGGc                                                                                                                  >  1:59576/1‑149 (MQ=255)

                                    aaCGATCGCCCTTATCGCATTACCCGTGGCGATCTCTTTTACATTCATGCTGACGATAAACACTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGc                                                                                                                  >  1:1153295/1‑149 (MQ=255)

                                    aaCGATAGCCCTTATAGCATTACACGTGGCGATCTCTATTACATTCATGATGAAGATAAACAATCCTACGCTTCCGTTAACGATATGGTTTTGAAGAATATTATTTATTTCCAGTAGCGTATGAAGATTAATCTTGAATGTCAGGGGGc                                                                                                                  >  2:1166749/1‑149 (MQ=255)

                                            cccTTATCGCATTACCCGTGGCGATCTCTTTTACATTCATGCTGACGATAAACACTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCgg                                                                                                          <  2:191661/149‑1 (MQ=255)

                                            cccTTATCGCATTACCCGTGGCGATCTCTTTTACATTCATGCTGACGATAAACACTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCgg                                                                                                          <  2:942516/149‑1 (MQ=255)

                                            cccTTATCGCATTACCCGTGGCGATCTCTTTTACATTCATGCTGACGATAAACACTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCgg                                                                                                          <  2:927655/149‑1 (MQ=255)

                                            cccTTATCGCATTACCCGTGGCGATCTCTTTTACATTCATGCTGACGATAAACACTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCgg                                                                                                          <  2:1253038/149‑1 (MQ=255)

                                             ccTTATCGCATTACCCGTGGCGATCTCTTTTACATTCATGCTGACGATAAACACTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCggg                                                                                                         >  2:1532998/1‑149 (MQ=255)

                                             ccTTATCGCATTACCCGTGGCGATCTCTTTTACATTCATGCTGACGATAAACACTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATAATATTTATTGCCCGGAGCGTCTGAAGATGAATCTTGACTGGCAGGGGGCGATTCCggg                                                                                                         >  1:798800/1‑149 (MQ=255)

                                              cTTATCGCATTACCCGTGGCGATCTCTTTTACATTCATGCTGACGATAAACACTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGa                                                                                                        <  2:1156075/149‑1 (MQ=255)

                                              cTTATCGCATTACCCGTGGCGATCTCTTTTACATTCATGCTGACGATAAACACTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGa                                                                                                        <  2:1299283/149‑1 (MQ=255)

                                              cTTATCGCATTACCCGTGGCGATCTCTTTTACATTCATGCTGACGATAAACACTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGa                                                                                                        <  1:1250348/149‑1 (MQ=255)

                                              attATCGCATTATCCGTGGCGATCTCATTTTCATTCATGCTGACGATAAACAGTCCTACGCTTCCTTTAACGATCTTGTTTTGCAGTATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGa                                                                                                        <  1:968308/148‑1 (MQ=255)

                                               ttATCGCATTACCCGTGGCGATCTCTTTTACATTCATGCTGACGATAAACACTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGAt                                                                                                       >  1:841636/1‑149 (MQ=255)

                                                tATCGCATTACCCGTGGCGATCTCTTTTACATTCATGCTGACGATAAACACTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATAATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGAtt                                                                                                      <  2:25374/149‑1 (MQ=255)

                                                 aTCGCATTACCCGTGGCGATCTCTTTTACATTCATGCTGACGATAAACACTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGAttt                                                                                                     >  1:1481092/1‑149 (MQ=255)

                                                    gCATTACCCGTGGCGATCTCTTTTACATTCATGCTGACGATAAACACTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGATTTAAc                                                                                                  <  1:1085415/149‑1 (MQ=255)

                                                      aTTACCCGTGGCGATCTCTTTTACATTCATGCTGACGATAAACACTCCTACGCTTCCGTTAACTATCTGGTTTTGCATAATCTTATTTATTGAACGGAGCGTCTGAAGCTGAATCTTTACTGGCAGGGGGCGATTCCGAGATTTAACGc                                                                                                >  1:941567/1‑149 (MQ=255)

                                                              gggcGATCTCTTTTACATTCATGCTGACGATAAACACTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGGCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGATTTAACGCCAGCGCAg                                                                                        >  1:1458385‑M2/2‑148 (MQ=255)

                                                                gCGATCTCTTTTACATTCATGCTGACGATAAACACTCCTCCGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGATTTAACGCCAGCGCAggg                                                                                      >  1:390385‑M2/1‑146 (MQ=255)

                                                                gCGATCTCTTTTACATTCATGCTGACGATAAACACTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGGGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGATTTAACGCCAGCGCAggg                                                                                      >  1:141032‑M2/1‑146 (MQ=255)

                                                                gCGATCTCTTTTACATTCATGCTGACGATAAACACTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGATTTAACGCCAGCGCAggg                                                                                      >  1:708341‑M2/1‑146 (MQ=255)

                                                                gCGATCGCTTTAACATTCATGCTGACGATAAACACTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGATTTAACGCCAGCGCAggg                                                                                      >  2:562084‑M2/1‑146 (MQ=255)

                                                                   aTCTCTTTTACATTGATGATGACGATATACTCTGCTACTCTTCAGATAACGATATGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGATTAATCTTTACTGGGAGGGGGCGATTCCGGGATTTAACGCCAGCGCAgggcaa                                                                                   >  1:1166749‑M2/1‑143 (MQ=255)

                                                                       ctTTTACATTCATGCTGACGATAAACACTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCtgcgctggcgttaaatcccggaatcgccccctgccagtcaagattcagcttcagacgctccgggcaataaa                                                                               <  1:904739‑M1/149‑72 (MQ=255)

                                                                        ttttACATTCATGCTGACGATAAACACTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGATTTAACGCCAGCGCAGGGCAACcaca                                                                              >  2:1311170/1‑149 (MQ=255)

                                                                         tttACATTCATGCTGACGATAAACACTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGATTTAACGCCAGCGCAGGGCAACCacac                                                                             <  2:434470/149‑1 (MQ=255)

                                                                          ttACATTCATGCTGACGATAAACACTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCtgcgctggcgttaaatcccggaatcgccccctgccagtcaagattcagcttcagacgctccgggcaataaataa                                                                            <  2:1374966‑M1/149‑75 (MQ=255)

                                                                           tACATTCATGCTGACGATAAACACTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCtgcgctggcgttaaatcccggaatcgccccctgccagtcaagattcagcttcagacgctccgggcaataaataat                                                                           <  2:188918‑M1/149‑76 (MQ=255)

                                                                           tACATTCATGCTGACGATAAACACTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGATTTAACGCCAGCGCAGGGCAACCACACTg                                                                           <  1:1176345/149‑1 (MQ=255)

                                                                            aCATTCATGCTGACGATAAACACTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGATTTAACGCCAGCGCAGGGCAACCACACTgg                                                                          >  2:1307299/1‑149 (MQ=255)

                                                                                  aTGCTGACGATAAACACTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGATTTAACGCCAGCGCAGGGCAACCACACTGGCGCtga                                                                    >  1:202763/1‑147 (MQ=255)

                                                                                      tGACGATAAACACTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTACGGGATTTAACGCCAGCGCAGCGCAACCACACTGGCGCTTAGGTa                                                                >  1:287185/1‑149 (MQ=255)

                                                                                            tAAACACTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGATTTAACGCCAGCGCAGGGCAACCACACTGGCGCTTAGGTAGCATgg                                                          <  2:216693/149‑1 (MQ=255)

                                                                                             aaaCACTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGATTTAACGCCAGCGCAGGGCAACCACACTGGCGCTTAGGTAGCATggg                                                         <  1:375495/149‑1 (MQ=255)

                                                                                             aaaCACTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGATTTAACGCCAGCGCAGGGCAACCACACTGGCGCTTAGGTAGCATggg                                                         <  1:973356/149‑1 (MQ=255)

                                                                                              aaCACTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGATTTAACGCCAGCGCAGGGCAACCACACTGGCGCTTAGGTAGCATgggg                                                        >  1:896116/1‑149 (MQ=255)

                                                                                              aaCACTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGATTTAACGCCAGCGCAGGGCAACCACACTGGCGCTTAGGTAGCATg                                                           >  2:82103/1‑146 (MQ=255)

                                                                                              aaCACTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGATTTAACGCCAGCGCAGGGCAACCACACTGGCGCTTAGGTAGCATg                                                           <  1:82103/146‑1 (MQ=255)

                                                                                                 acTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGATTTAACGCCAGCGCAGGGCAACCACACTGGCGCTTAGGTAGCATGGGGATg                                                     >  2:1360945/1‑149 (MQ=255)

                                                                                                 acTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGATTTAACGCCAGCGCAGGGCAACCACACTGGCGCTTAGGTAGCATGGGGATg                                                     <  2:1153295/149‑1 (MQ=255)

                                                                                                 acTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGATTTAACGCCAGCGCAGGGCAACCACACTGGCGCTTAGGTAGCATGGGGATg                                                     >  2:363878/1‑149 (MQ=255)

                                                                                                   tCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGATTTAACGCCAGCGCAGGGCAACCACACTGGCGCTTAGGTAGCATGGGGATGgc                                                   >  2:1159136/1‑149 (MQ=255)

                                                                                                     cTACGCTTCCGTTAACGATCTGGTTTTGCAGAAAATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGATTTAACGCCAGCGCAGGGCAACCACACTGGCGCTTAGGTAGCAAGGTGATGgcgc                                                 >  2:598947/1‑149 (MQ=255)

                                                                                                      tACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGATTTAACGCCAGCGCAGGGCAACCACACTGGCGCTTAGGTAGCATGGGGATGGCGCa                                                >  1:1202727/1‑149 (MQ=255)

                                                                                                           ttCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGATTTAACGCCAGCGCAGGGCAACCACACTGGCGCTTAGGTAGCATGGGGATGGCGCAGgcgc                                           >  1:577453/1‑149 (MQ=255)

                                                                                                               gTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGATTTAACGCCAGCGCAGGGCAACCACACTGGCGCTTAGGTAGCATGGGGATGGCGCAGGCGCGGCa                                       >  1:574801/1‑149 (MQ=255)

                                                                                                                 tAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGATTTAACGCCAGCGCAGGGCAACCACACTGGCGCTTAGGTAGCATGGGGATGGCGCAGGCGCGGCAgg                                     >  1:1209729/1‑149 (MQ=255)

                                                                                                                  aaCGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGATTTAACGCCAGCGCAGGGCAACCACACTGGCGCTTAGGTAGCATGGGGATGGCGCAGGCGCGGCAGGt                                    >  2:502847/1‑149 (MQ=255)

                                                                                                                    cGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGATTTAACGCCAGCGCAGGGCAACCACACTGGCGCTTAGGTAGCATGGGGATGGCGCAGGCGCGGCAGGTTa                                  >  1:1306221/1‑149 (MQ=255)

                                                                                                                      aTCTGGTTTTGCGGAATATTATTTATTGCCCGGATCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGATTTAACGCCAGCGCAGGGCAACCACACTGGCGCTTAGGTAGCATGGGGATGGCGCAGGCGCGGCAGGTTATc                                <  1:1306603/149‑1 (MQ=255)

                                                                                                                       tCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGATTTAACGCCAGCGCAGGGCAACCACACTGGCGCTTAGGTAGCATGGGGATGGCGCAGGCGCGGCAGGTTATCg                               >  2:826499/1‑149 (MQ=255)

                                                                                                                       gcTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAATCTGTATCTTGACTGGCAGGGGGCGATTCCGGGATTTACCGCCAGCGCAGGGCAACCACACTGGCGCTTAGGTAGCATGGGGATGGCGCAGGCGCGGCAGGTTATCg                               <  2:59576/148‑1 (MQ=255)

                                                                                                                           gTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGATTTAACGCCAGCGCAGGGCAACCACACTGGCGCTTAGGTAGCATGGGGATGGCGCAGGCGCGGCAGGTTATCGGTCa                           <  2:1481092/149‑1 (MQ=255)

                                                                                                                                 cAGAATATTTTTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGATTTAACGCCAGCGCAGGGCAACCACACTGGCGCTTAGGTAGCATGGGGATGGCGCAGGCGCGGCAGGTTATCGGTCAGCTTGa                     <  1:598449/149‑1 (MQ=255)

                                                                                                                                 cAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGATTTAACGCCAGCGCAGGGCAACCacac                                                                             >  1:153984/1‑93 (MQ=255)

                                                                                                                                 cAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGATTTAACGCCAGCGCAGGGCAACCacac                                                                             <  2:153984/93‑1 (MQ=255)

                                                                                                                                    aaTATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGATTTAACGCCAGCGCAgggcaataaataatattctgcaaaaccagatcgttaacggaagcgtaggagtgtttatcgtcagcatgaat                  <  1:486140‑M2/149‑72 (MQ=255)

                                                                                                                                    aaTATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGATTTAACGCCAGCGCAGGGCAACCACACTGTCGCTTAGGTAGCATGGGGATGGCGCAGGCGCGGCAGGTTATCGGTCAGCTTGAGCa                  >  2:317128/1‑149 (MQ=255)

                                                                                                                                    aaTATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGATTTAACGCCAGCGCAGGGCAACCACACTGGCGCTTAGGTAGCATGGGGATGGCGCAGGCGCGGCAGGTTATCGGTCAGCTTGAGCa                  >  2:254019/1‑149 (MQ=255)

                                                                                                                                     atatTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGATTTATCGCCAGCGCAGGGCAACCACACTGGCGCTTAGGTAGCATGGGGATGGCGCAGGCGCGGCAGGTTATCGGTCAGCTTGAGCAt                 <  2:153175/149‑1 (MQ=255)

                                                                                                                                       attattTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGATTTAACGCCAGCGCAgggcaataaataatattctgcaaaaccagatcgttaacggaagcgtaggagtgtttatcgtcagcatgaatgta               <  2:188918‑M2/149‑75 (MQ=255)

                                                                                                                                        ttatttatTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGATTTAACGCCAGCGCAgggcaataaataatattctgcaaaaccagatcgttaacggaagcgtaggagtgtttatcgtcagcatgaatgtaa              <  2:1374966‑M2/149‑76 (MQ=255)

                                                                                                                                        ttatttatTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGATTTAACGCCAGCGCAGGGCAACCACACTGGCGCTTAGGTAGCATGGGGATGGCGCAGGCGCGGCAGGTTATCGGTCAGCTTGAGCATGaa              >  2:195873/1‑149 (MQ=255)

                                                                                                                                           tttattGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGATTTAACGCCAGCGCAgggcaataaataatattctgcaaaaccagatcgttaacggaagcgtaggagtgtttatcgtcagcatgaatgtaaaag           <  1:904739‑M2/149‑79 (MQ=255)

                                                                                                                                           tttattGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGATTTAACGCCAGCGCAGGGCAACCACACTGGCGCTTAGGTAGCATGGGGATGGCGCAGGCGCGGCAGGTTATCGGTCAGCTTGAGCATGAAagt           >  2:1414003/1‑149 (MQ=255)

                                                                                                                                            ttattGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGATTTAACGCCAGCGCAGGGCAACCACACTGGCGCTTAGGTAGCATGGGGATGGCGCAGGCGCGGCAGGTTATCGGTCAGCTTGAGCATGAAagta          <  1:745120/149‑1 (MQ=255)

                                                                                                                                            ttattGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGATTTAACGCCAGCGCAGGGCAACCACACTGGCGCTTAGGTAGCATGGGGATGGCGCAGGCGCGGCAGGTTATCGGTCAGCTTGAGCATGAAagta          <  1:363878/149‑1 (MQ=255)

                                                                                                                                              attGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGATTTAACGCCAGCGCAGGGCAACCACACTGGCGCTTAGGTAGCATGGGGATGGCGCAGGCGCGGCAGGTTATCGGTCAGCTTGAGCATGAAagtagt        >  2:601521/1‑149 (MQ=255)

                                                                                                                                               ttGCCCtgcgctggcgttaaatcccggaatcgccccctcccagtaaagattaatcttcagacgctccgggcaataaataatattctgcaaaaccatatcgttatctgaagagtagcagagtatatcgtcatcatcaatgtaaaagagat       >  1:1166749‑M1/1‑6 (MQ=255)

                                                                                                                                               ttGCCAGGAGCGACTGAAGCTTAATCTTGAATGGCAGGGGGCGATTACTGGATTTAACGCCAGCGCAGGGCAACCACACAGGCGCTTAGGTAGAATGTGGATGGCGCAGGCGCTGCAGTTAATCGGTCAGCTTGAGCATGAAagaagta       >  2:720278/1‑148 (MQ=255)

                                                                                                                                                  ccctgcgctggcgttaaatcccggaatcgccccctgccagtcaagattcagcttcagacgctccgggcaataaataatattctgcaaaaccagatcgttaacggaagcgtaggagtgtttatcgtcagcatgaatgttaaagcgatcgc    >  2:562084‑M1/1‑3 (MQ=255)

                                                                                                                                                  ccctgcgctggcgttaaatcccggaatcgccccctgccagtcaagattcagcttcagacgctccgggcaataaataatattctgcaaaaccagatcgttaacggaagcgtaggagtgtttatcgtcagcatgaatgtaaaagagatcgc    >  2:841636‑M1/1‑3 (MQ=255)

                                                                                                                                                  ccctgcgctggcgttaaatcccggaatcgccccctgccagtcaagattcagcttcagacgctccgggcaataaataatattctgcaaaaccagatcgttaacggaagcgtaggagtgtttatcgtcagcatgaatgtaaaagagatcgc    >  1:708341‑M1/1‑3 (MQ=255)

                                                                                                                                                  ccctgcgctggcgttaaatcccggaatcgccccctgccagtcaagattcagcttcagacgctccgggcaataaataatattctgcaaaaccagatcgttaacggaagcggaggagtgtttatcgtcagcatgaatgtaaaagagatcgc    >  1:390385‑M1/1‑3 (MQ=255)

                                                                                                                                                  cccGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCAGGATTTAACGCCAGCGCAGGGCAACCACACTGGCGCTTAGGTAGCATGGGGATGGCGCAGGCGCGGCAGGTTATCGGTCAGCTTGAGCATGAAAGTAGTCAGc    >  2:909187/1‑149 (MQ=255)

                                                                                                                                                   ccGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGATTTAACGCCAGCGCAGGGCAACCACACTGGCGCTTAGGTAGCATGGGGATGGCGCAGGCGCGGCAGGTTATCGGTCAGCTTGAGCATGAAAGTAGTCAGCa   <  2:493247/149‑1 (MQ=255)

                                                                                                                                                    ctgcgctggcgttaaatcccggaatcgccccctgccagtcaagattcagcttcagccgctccgggcaataaataatattctgcaaaaccagatcgttaacggaagcgtaggagtgtttatcgtcagcatgaatgtaaaagagatcgccc  >  1:1458385‑M1/1‑1 (MQ=255)

                                                                                                                                                    cGGAGCGTCTGACGCTGACTCTTGACTGGCAGGGGGCGATTCCGGGATTTAACGCCAGCGCAGGGCAACGACACTGGCGCTTAGGTAGCATGGGGATGGCGCAGGCGCGGCAGGTTATCGGTCAGCTTGAGCATGAAAGTAGTCAGCAt  <  1:261943/149‑1 (MQ=255)

GTGATTGTCTGGCGCGGTAATGGCCTGCATGTACTCAACGATCGCCCTTATCGCATTACCCGTGGCGATCTCTTTTACATTCATGCTGACGATAAACACTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGATTTAACGCCAGCGCAGGGCAACCACACTGGCGCTTAGGTAGCATGGGGATGGCGCAGGCGCGGCAGGTTATCGGTCAGCTTGAGCATGAAAGTAGTCAGCAT  >  NC_000913/4098769‑4099065

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.