New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	274038 =	NA (NA)	4 (0.050)	4/262	NT	NA	noncoding (1112/1195 nt)	IS5	repeat region
	?	NC_000913	274083 =	NA (NA)					noncoding (1067/1195 nt)	IS5	repeat region

ATCGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTT  >  NC_000913/273935‑274102                                                                                                                                                     |                    aTCGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTaa                     >  2:96620/1‑149 (MQ=255)   cGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAgg                   <  1:864463/149‑1 (MQ=40)     cTGACAGCACTGTTATGGAAGGTGCGAATATGCGGGGTAATTCTTCTCTGCTGACTCAGTGATTTCATTTCTTCTTGTTTGAGTCGATTTTTTCTCCCGTAAATGGCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTATGGCg                 <  2:379757/149‑1 (MQ=14)      tGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGt                >  2:65817/1‑149 (MQ=38)       gACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGtt               <  1:1198670/149‑1 (MQ=38)            cACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATccc          >  1:1221303/1‑149 (MQ=33)               tGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAg       <  2:1312159/149‑1 (MQ=32)               tGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAg       <  2:584503/149‑1 (MQ=32)               tGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTATAGGGTGACTCAGTCATTTAATTTCTTGATGTTTGCGCCGATTTTTTCTCCCGTAAATGCCTTGAATAAGCCTATTTAGACCGTTTCATCGCCATTTAAGGCGTTAAGCCCAg       >  2:637216/1‑149 (MQ=11)                 ttttGGAATGTGCTAATAATCGTTGAAATTCTTCTCGGCTGACTCATTAATTTCATTTCTTCATTTTTTAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGtt     <  2:940660/146‑1 (MQ=11)                   aTGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCAATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGtttt   <  2:1459635/149‑1 (MQ=14)                    tGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGttttt  >  2:1347788/1‑149 (MQ=11)                                                                                                                                                     |                    ATCGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTT  >  NC_000913/273935‑274102

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.