BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1978503 =	NA (NA)	46 (0.510)	35/274	NT	34.6%	noncoding (768/768 nt)	IS1	repeat region
*	?	NC_000913	2380552 =	87 (0.960)	46 (0.510)	35/274	NT	34.6%	coding (92/1296 nt)	menF	isochorismate synthase 2

Only 100 of 153 total aligned reads displayed.

TTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTAAAAGCCTCACATTATACGGGGTACTACAAAAAAAATGCA  >  NC_000913/2380404‑2380700

aattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccg                                                                                                                                                      <  1:1442575‑M2/1‑1 (MQ=255)

  gtgCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGa                                                                                                                                                    <  1:347095/149‑1 (MQ=255)

   tgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttgtcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGGaa                                                                                                                                                   <  2:131674‑M2/4‑1 (MQ=255)

      cTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATCACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAatat                                                                                                                                                >  1:615542/1‑149 (MQ=255)

         gcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattagctgatcataaaccacgatcaagaagttggagtcattaccGGATTATCGa                                                                                                                                             >  2:791773‑M2/140‑149 (MQ=255)

         gTCCATCGACGTAAAACGGGTAATCGCGCCCATGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGa                                                                                                                                             <  2:1444717/149‑1 (MQ=255)

         gTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGa                                                                                                                                             >  2:545003/1‑149 (MQ=255)

           ccAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATa                                                                                                                                           <  2:170291/149‑1 (MQ=255)

             aaCGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATGGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAAc                                                                                                                                         >  1:27354/1‑149 (MQ=255)

                  gaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGGAATATCGATAACCCGaa                                                                                                                                    <  1:203014‑M2/19‑1 (MQ=255)

                        aCGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCgg                                                                                                                              <  2:1325615/149‑1 (MQ=255)

                        aCGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCgg                                                                                                                              <  1:1566842/149‑1 (MQ=255)

                        aCGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCgg                                                                                                                              >  2:1466089/1‑149 (MQ=255)

                        aCGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCgg                                                                                                                              <  2:155986/149‑1 (MQ=255)

                            gTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGgtgt                                                                                                                          >  1:986820/1‑149 (MQ=255)

                            gTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGgtgt                                                                                                                          >  2:795917/1‑149 (MQ=255)

                                  gcgcCCAGGACGACAGCTTCTTCATCACCATTACGCTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAACGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCgg                                                                                                                    <  2:1087001/149‑1 (MQ=255)

                                    ggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGaa                                                                                                                  <  2:1168105‑M2/37‑1 (MQ=255)

                                     gcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAAt                                                                                                                 <  2:994778‑M2/38‑1 (MQ=255)

                                     cccAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAAt                                                                                                                 <  1:1108280/149‑1 (MQ=255)

                                           ctgggacggaagtcgctggcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTg                                                                                                           <  2:591050‑M2/44‑1 (MQ=255)

                                            cgacAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGc                                                                                                          <  2:904505/149‑1 (MQ=255)

                                                 cggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACaa                                                                                                     >  1:669173‑M2/100‑149 (MQ=255)

                                                   ttcttcATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAAt                                                                                                   >  2:594301/1‑149 (MQ=255)

                                                   ttcttcATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTGTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAGTCTCTTGCGACAAAt                                                                                                   >  2:250498/1‑149 (MQ=255)

                                                     cttcATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATgg                                                                                                 <  1:602672/149‑1 (MQ=255)

                                                         atcaCCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCa                                                                                             >  2:512695/1‑149 (MQ=255)

                                                          tcaCCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAg                                                                                            >  1:614408/1‑149 (MQ=255)

                                                             tcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAg                                                                                         <  1:1226518‑M2/62‑1 (MQ=255)

                                                               gttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGAt                                                                                       >  1:1553592‑M2/86‑149 (MQ=255)

                                                                ttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAAt                                                                                                                 >  2:744008‑M2/85‑122 (MQ=255)

                                                                ttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAAt                                                                                                                 <  1:744008‑M2/38‑1 (MQ=255)

                                                                 tACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGGCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGAttt                                                                                     <  1:1482332/149‑1 (MQ=255)

                                                                   tcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTc                                                                                   <  1:793277‑M2/68‑1 (MQ=255)

                                                                   tcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTc                                                                                   <  1:18442‑M2/68‑1 (MQ=255)

                                                                   cGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTc                                                                                   <  1:512695/149‑1 (MQ=255)

                                                                    gttgttGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAAtctc                                                                                                              <  2:636434/121‑1 (MQ=255)

                                                                    gttgttGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAAtctc                                                                                                              >  1:636434/1‑121 (MQ=255)

                                                                     ttgttgCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCa                                                                                 >  2:628824/1‑149 (MQ=255)

                                                                     ttgttgCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCa                                                                                 <  1:545003/149‑1 (MQ=255)

                                                                           ggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGGAATATCTATAACCCGAATGCCGGTTGTCGCAGGAATCTCTTGAGACAAATGGCGCAGTGGATTTTCCAGCGCCg                                                                           >  1:1420539‑M2/74‑149 (MQ=255)

                                                                           ggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacacaatcaataagttggagtcattaccGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCg                                                                           <  1:781219‑M2/76‑1 (MQ=255)

                                                                            gtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAAt                                                                                                                 >  1:901583‑M2/73‑110 (MQ=255)

                                                                             aGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCGTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCgta                                                                         >  1:845425/1‑149 (MQ=255)

                                                                                agctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCgtagta                                                                      >  2:1124073‑M2/69‑149 (MQ=255)

                                                                                 gAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTaa                                                                     >  2:937411/1‑149 (MQ=255)

                                                                                   aTTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGt                                                                   >  2:951594/1‑149 (MQ=255)

                                                                                    gcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTg                                                                  >  1:1260055‑M2/65‑149 (MQ=255)

                                                                                     tGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAAACCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGa                                                                 <  2:685891/149‑1 (MQ=255)

                                                                                     catgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGa                                                                 >  2:1428125‑M2/64‑149 (MQ=255)

                                                                                          gTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCAAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCa                                                            >  2:1412825/1‑149 (MQ=255)

                                                                                              gtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTAGCGACAAATCGCGCAGTAGATATTCCAGCGCCGTAGTAAGTGATTGCAcgcg                                                        >  1:1307131‑M2/55‑149 (MQ=255)

                                                                                               tcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCgg                                                       >  2:493549‑M2/54‑149 (MQ=255)

                                                                                               tcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCgg                                                       >  2:22672‑M2/54‑149 (MQ=255)

                                                                                               tcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCgg                                                       <  1:965127‑M2/96‑1 (MQ=255)

                                                                                                catcgggcattatctgaacataaaacactatcaataagttggagtcattaccGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGTCGTAGTAAGTGATTGCACGCGGa                                                      >  1:435748‑M2/53‑149 (MQ=255)

                                                                                                 tGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGAc                                                     <  1:749224/149‑1 (MQ=255)

                                                                                                 atcgggcattatctgaacataaaacactatcaataagttggagtcattaccGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGAc                                                     <  2:158083‑M2/98‑1 (MQ=255)

                                                                                                 atcgggcattatctgaacataaaacactatcaataagttggagtcattaccGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGAc                                                     <  1:163831‑M2/98‑1 (MQ=255)

                                                                                                      aCTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCtctc                                                >  2:1227672/1‑149 (MQ=255)

                                                                                                      aCTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCtctc                                                >  2:1280985/1‑149 (MQ=255)

                                                                                                          gccagccaGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTg                                            >  1:1598448/1‑149 (MQ=255)

                                                                                                          gccagccaGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTg                                            >  1:898875/1‑149 (MQ=255)

                                                                                                               gaacataaaacactatcaataagttggagtcattaccGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTaaa                                       >  2:546031‑M2/38‑149 (MQ=255)

                                                                                                               gaacacaaaacactatcaataagttggagtcattaccGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTaaa                                       >  2:728351‑M2/38‑149 (MQ=255)

                                                                                                                cagcTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTaaaa                                      <  1:1485630/149‑1 (MQ=255)

                                                                                                                    tCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGTATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTAAAACCCt                                  <  2:1052056/149‑1 (MQ=255)

                                                                                                                     cAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGTAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTAAAAGCCTc                                 <  1:121965/149‑1 (MQ=255)

                                                                                                                      aaGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTAAAAGCCTcc                                >  2:287633/1‑148 (MQ=255)

                                                                                                                       aGGCAGCAAAAGCGTCTTTGAGATGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAATTGATTGCACGCGGACCTCTCCCTGTTAAAAGCCTcac                               <  1:1416196/149‑1 (MQ=255)

                                                                                                                         gCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTAAAAGCCTCAGAt                             >  1:238676/1‑149 (MQ=255)

                                                                                                                            tCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTaaa                                       <  2:759490/136‑1 (MQ=255)

                                                                                                                            tCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTAAAAGCCTCACATtat                          >  2:1212136/1‑149 (MQ=255)

                                                                                                                            tCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCAGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTaaa                                       >  1:759490/1‑136 (MQ=255)

                                                                                                                             atcaataagttggagtcattaccGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTAAAAGCCTCACATtata                         >  1:190794‑M2/24‑149 (MQ=255)

                                                                                                                              tcaataagttggagtcattaccGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTAAAAGCCTCACATTATAc                        >  1:818379‑M2/23‑149 (MQ=255)

                                                                                                                               aaaGCGTCTTTGACCGGGAAATTAATATCGATACCCCTAATGCCGGGTGTCGCCGTAATTTCTTGCGAAAAATGGCGCAGTATTTTTTCCAGCGCGGTAGTAAGTTATTGCACGCGGACCTCTCCCTGTTAAAAGCATCACATtatatg                       <  2:615542/149‑3 (MQ=255)

                                                                                                                                aataagttggagtcattaccGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTAAAAGCCTCACATTATACgg                      >  2:138555‑M2/21‑149 (MQ=255)

                                                                                                                                aaGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTAAAAGCCTCACATTATACgg                      >  2:694858/1‑149 (MQ=255)

                                                                                                                                aaGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTAAAAGCCTCACATTATACgg                      >  2:902629/1‑149 (MQ=255)

                                                                                                                                  gCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTAAAAGCCTCACATTATACgggg                    <  1:1016107/149‑1 (MQ=255)

                                                                                                                                     tCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTAAAAGCCTCACATTATACGGGGtac                 <  2:27354/149‑1 (MQ=255)

                                                                                                                                     gttggagtcattaccGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTCATTGCACGCGGACCTCTCCCTGTTAAAAGCCTCACATtatacggatcgg                 >  2:780430‑M2/16‑144 (MQ=255)

                                                                                                                                      cTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCATCTTAAAAGCCTCACATTATACGGGTtact                >  2:1363416/1‑149 (MQ=255)

                                                                                                                                         tGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTAAAAGCCTCACATTATACGGGGTACTACa             <  2:1368283/149‑1 (MQ=255)

                                                                                                                                         gagtcattaccGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTAAAAGCCTCACATTATACGGGGTACTACa             >  1:656161‑M2/12‑149 (MQ=255)

                                                                                                                                         gagtcattaccGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACATCTCCATTTTAAAACCATCCAATTATACGGggtactaaa             >  1:390545‑M2/12‑147 (MQ=255)

                                                                                                                                            gagGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTAAAAGCCTCACATTATACGGGGTACTACaaaa          >  2:1204831/1‑149 (MQ=255)

                                                                                                                                            gagGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTAAAAGCCTCACATTATACGGGGTACTACaaaa          >  2:1040334/1‑149 (MQ=255)

                                                                                                                                              attaccGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTAAAAGCCTCACATTATACGGGGTACTACaaaaaa        >  2:187528‑M2/7‑149 (MQ=255)

                                                                                                                                              attaccGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTAAAAGCCTCACATTATACGGGGTACTACaaaaaa        <  1:493549‑M2/143‑1 (MQ=255)

                                                                                                                                               ttaccGGAATATCGATAACCCGAATTCCGGGTGTAGCCGGAATCTCTTGGGACAATTGGCGCAGTATATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTAAAAGCCTCACATTATACGGGGTACTACaaaaaaa       <  2:101631‑M2/144‑1 (MQ=255)

                                                                                                                                               ttaccGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTAAAAGCCTCACATTATACGGGCTACTACaaaaaaa       >  1:324201‑M2/6‑149 (MQ=255)

                                                                                                                                                 aaaGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTAAAAGCCTCACATTATACGGGGTACTACAAAAAAAAt     >  2:1066083/1‑149 (MQ=255)

                                                                                                                                                 aaaGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTAAAAGCCTCACATTATACGGGGTACTACAAAAAAAAt     <  1:1466089/149‑1 (MQ=255)

                                                                                                                                                  aaGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTAAAAGCCTCACATTATACGGGGTACTACAAAAAAAATg    >  1:731328/1‑149 (MQ=255)

                                                                                                                                                    ggAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTAAAAGCCTCACATTATAc                        <  2:327086/127‑1 (MQ=255)

                                                                                                                                                    ggAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTAAAAGCCTCACATTATAc                        >  1:332056/1‑127 (MQ=255)

                                                                                                                                                    ggAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTAAAAGCCTCACATTATAc                        >  1:327086/1‑127 (MQ=255)

                                                                                                                                                    ggAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTAAAAGCCTCACATTATAc                        <  2:332056/127‑1 (MQ=255)

TTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTAAAAGCCTCACATTATACGGGGTACTACAAAAAAAATGCA  >  NC_000913/2380404‑2380700

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.