Predicted mutation
evidence seq id position mutation freq annotation gene description
MC JC NC_000913 3,815,859 Δ82 bp 100% [rph][rph] [rph], [rph]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 3815859 3815940 82 96 [0] [0] 97 [rph]–[rph] [rph],[rph]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 38158580 (0.000)89 (1.060) 65/254 NT 100% pseudogene (24/48 nt) rph ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH
?NC_000913 3815941 = 0 (0.000)pseudogene (609/669 nt) rph ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH

AAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCG  >  NC_000913/3815802‑3816089
                                                                                                                                           |                                                                                                                                                    
cctgcttgctaagcgcaaactcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaatgcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGc                                                                                                                                             >  2:557505‑M2/140‑149 (MQ=255)
  tgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCAc                                                                                                                                           <  2:698009‑M2/12‑1 (MQ=255)
  tgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCAc                                                                                                                                           <  2:282617‑M2/12‑1 (MQ=255)
        gtaagcgcaaattcaataaactggcgctgatttggtttcatgccttcgctcctgatcttacttttctacagacaaaaaaaaggcgactcatcagtcggcttaaaattcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAat                                                                                                                                     <  1:383707‑M2/18‑1 (MQ=255)
        ctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAat                                                                                                                                     <  2:1585593‑M2/18‑1 (MQ=255)
         taagctcaaattcaataaactggcgctgatagtgtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtctccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAatg                                                                                                                                    <  1:259330‑M2/19‑1 (MQ=255)
         taagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaatatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAatg                                                                                                                                    >  1:1370381‑M2/131‑149 (MQ=255)
         taagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAatg                                                                                                                                    >  2:358932‑M2/131‑149 (MQ=255)
         aaagcgcaaattcaataaactggcgcttatatggtttcatgccttcgctcctcatcttacttttcaacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAatg                                                                                                                                    <  2:634374‑M2/19‑1 (MQ=255)
           agcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAatgat                                                                                                                                  >  2:1286627‑M2/129‑149 (MQ=255)
           agcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatctaacttttctacagacaaaaaaaagaccaatcaacagaccccttaaaaatcagattgccaccgccgccttcagcCGTCCCCTCCACTACAatgat                                                                                                                                  >  2:221516‑M2/129‑149 (MQ=255)
            gcgcaaattcaataaactggcgctgctatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggagactcatcagtcgcctgaaaaatcagtttgccagcgccgcctactgcCGTCCCCTACACTAAAataatg                                                                                                                                 >  2:288329‑M2/128‑149 (MQ=255)
              gcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacctttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATgcg                                                                                                                               >  2:1233062‑M2/126‑149 (MQ=255)
               aaaattcaataaactggcgcttatatggtttcatgccttcgctcctcatcttaattttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATgcgc                                                                                                                              <  1:594592‑M2/25‑1 (MQ=255)
                  attcaataaactggcgctgatatggtttcatgccttcgctcatcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgcctgaaaaatcagtttgccagccccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCg                                                                                                                           >  2:1506614‑M2/122‑149 (MQ=255)
                   ttcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGt                                                                                                                          <  2:713371‑M2/29‑1 (MQ=255)
                      aataatctggctcttatatggtttcatgccttggctcctattctttcttttctcctcacaaaaaaatggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCtt                                                                                                                       <  1:537262‑M2/32‑1 (MQ=255)
                       ataaactgtcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaacgcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTc                                                                                                                      <  1:469673‑M2/33‑1 (MQ=255)
                         aaactggcgctgttatggtttaatgccttcgctcctcatcttacttttaaacccccaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCgg                                                                                                                    <  2:687050‑M2/35‑1 (MQ=255)
                         aaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCgg                                                                                                                    >  2:1549657‑M2/115‑149 (MQ=255)
                           actggctcttatatggtttcatgccttcgctcttcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGtc                                                                                                                  <  2:1228236‑M2/37‑1 (MQ=255)
                             tggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGtcat                                                                                                                <  2:312988‑M2/39‑1 (MQ=255)
                              ggcgctgaatttgtttcatgccttcgctcctcatcttacttttctacagacaataaaaaggcgtctcatcagtcgccttaaaaatcagttttccagcgccgacttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCTGtcatc                                                                                                               <  1:221516‑M2/40‑1 (MQ=255)
                               gcgctgatattgtttcatgccttcgctcctcatctttcttttctacacacaaaaaaaacgcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGtcatca                                                                                                              <  1:1531025‑M2/41‑1 (MQ=255)
                               gcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGtcatca                                                                                                              <  2:1525489‑M2/41‑1 (MQ=255)
                                       atggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTc                                                                                                      >  2:88726‑M2/101‑149 (MQ=255)
                                       atggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTc                                                                                                      >  1:64863‑M2/101‑149 (MQ=255)
                                        tggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCAGTCATCACTACGTTCa                                                                                                     <  2:536157‑M2/50‑1 (MQ=255)
                                           tttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGt                                                                                                  <  2:1384208‑M2/53‑1 (MQ=255)
                                           tttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGt                                                                                                  >  1:1595596‑M2/97‑149 (MQ=255)
                                            ttcatgccttcgctcctcatcttacttttctacagaaaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTc                                                                                                 <  2:1521280‑M2/54‑1 (MQ=255)
                                             tcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGGCATCACTACGTTCATGTCg                                                                                                <  2:264566‑M2/55‑1 (MQ=255)
                                             gaatgcgttcgcgcctcatattaattttctaaatacaaaaaaacctcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCg                                                                                                <  2:1020797‑M2/55‑1 (MQ=255)
                                              catgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCgg                                                                                               >  2:1255974‑M2/94‑149 (MQ=255)
                                               atgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACATCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGt                                                                                              >  2:267435‑M2/93‑149 (MQ=255)
                                                   cttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTctct                                                                                          >  2:1144932‑M2/89‑149 (MQ=255)
                                                    ttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgcctaaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGTAGCGCCCTGCTTCGGTCATCACTACGTTCATGTCGGTCTCTg                                                                                         >  2:786536‑M2/88‑149 (MQ=255)
                                                           ctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGcagc                                                                                  >  1:404854‑M2/81‑148 (MQ=255)
                                                           ctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCaga                                                                                  >  1:1169658‑M2/81‑149 (MQ=255)
                                                            tcatcttaattttctacagacaaaaataagtcgactcatcagtcgcattaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCagag                                                                                 <  1:128887‑M2/70‑1 (MQ=255)
                                                                cttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagagcagccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCtt                                                                             >  1:66526‑M2/76‑149 (MQ=255)
                                                                 ttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTc                                                                            >  2:714859‑M2/75‑149 (MQ=255)
                                                                  tacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCa                                                                           >  2:887113‑M2/74‑149 (MQ=255)
                                                                   acttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCaa                                                                          >  1:1468144‑M2/73‑149 (MQ=255)
                                                                    cttttctacagacaaaaaaacggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAAc                                                                         <  2:427213‑M2/78‑1 (MQ=255)
                                                                    cttttctacacacaaaaaaaccgcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAAc                                                                         <  1:547050‑M2/78‑1 (MQ=255)
                                                                     ttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACg                                                                        >  1:94158‑M2/71‑149 (MQ=255)
                                                                     ttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACg                                                                        >  1:715019‑M2/71‑149 (MQ=255)
                                                                           acagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCGCTGCACTTCAATGATGCGCCCGTCTTCGGTCCTCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTcc                                                                  >  1:68113‑M2/65‑149 (MQ=255)
                                                                             agacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCCCTTCAGTGATGCGCCCGTCTTCGGTCATCACTAGGTTCATGTCGGTCTCTGCGGCAGCGTCATCAACGTATTCcac                                                                >  1:296646‑M2/63‑148 (MQ=255)
                                                                             agacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAg                                                                >  2:1279238‑M2/63‑149 (MQ=255)
                                                                             agacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCGGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTGCGTTCATGTCGGTCTCTGCGGCAGCGTCTTCAACGTATTCCAg                                                                >  1:1433888‑M2/63‑149 (MQ=255)
                                                                                caaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATc                                                             >  2:550988‑M2/60‑149 (MQ=255)
                                                                                 aaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCg                                                            >  2:514263‑M2/59‑149 (MQ=255)
                                                                                 aaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCGTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCCACGTATTCCCGATCg                                                            >  1:467816‑M2/59‑149 (MQ=255)
                                                                                 aaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGACTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAAAGTATTCCAGATCg                                                            >  1:1327831‑M2/59‑149 (MQ=255)
                                                                                   aaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCa                                                          >  2:868512‑M2/57‑149 (MQ=255)
                                                                                   aaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGAGGCAGAGTCTTCCAAGTATTCCAGATCGCa                                                          >  2:1148497‑M2/57‑149 (MQ=255)
                                                                                    aaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCaa                                                         >  2:646782‑M2/56‑149 (MQ=255)
                                                                                    aaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCaa                                                         >  1:1585035‑M2/56‑149 (MQ=255)
                                                                                    aaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCaa                                                         >  1:423512‑M2/56‑149 (MQ=255)
                                                                                      aaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTGCGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAAc                                                       >  1:242604‑M2/54‑149 (MQ=255)
                                                                                        aggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCCAACCg                                                     >  2:1108957‑M2/52‑149 (MQ=255)
                                                                                         ggcgactgatgagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTAATCCAGATCGCAAACCGc                                                    >  2:1041489‑M2/51‑149 (MQ=255)
                                                                                          gcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCt                                                   >  2:393840‑M2/50‑149 (MQ=255)
                                                                                              ctcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGc                                               >  1:678170‑M2/46‑149 (MQ=255)
                                                                                              ctcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGc                                               >  2:555274‑M2/46‑149 (MQ=255)
                                                                                                catcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCg                                             <  1:358932‑M2/106‑1 (MQ=255)
                                                                                                catcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCg                                             >  1:927729‑M2/44‑149 (MQ=255)
                                                                                                  tcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGtt                                           <  1:1398734‑M2/108‑1 (MQ=255)
                                                                                                  tcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGtt                                           <  2:1098346‑M2/108‑1 (MQ=255)
                                                                                                  tcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGtt                                           <  2:64863‑M2/108‑1 (MQ=255)
                                                                                                  tcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGtt                                           <  1:590987‑M2/108‑1 (MQ=255)
                                                                                                  tcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGAACGCAAACCGCTTCGCCGtt                                           >  1:1081663‑M2/42‑149 (MQ=255)
                                                                                                       cgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACaa                                      <  1:557505‑M2/113‑1 (MQ=255)
                                                                                                          cttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGCTCGCAAACCGCGTCGCCGTTCACAATTc                                   >  1:468705‑M2/34‑149 (MQ=255)
                                                                                                          cttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTc                                   >  2:1515150‑M2/34‑149 (MQ=255)
                                                                                                          cttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTc                                   <  1:1549657‑M2/116‑1 (MQ=255)
                                                                                                          cttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTc                                   <  2:582327‑M2/116‑1 (MQ=255)
                                                                                                           ttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTcc                                  <  2:4214‑M2/117‑1 (MQ=255)
                                                                                                             aaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGGCTTCAACGTATTCCAGATCGCAACCCGCTTCGCCGTTCACAATTCCGa                                <  1:267435‑M2/119‑1 (MQ=255)
                                                                                                               aaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACa                              >  1:601469‑M2/29‑149 (MQ=255)
                                                                                                               aaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACa                              <  2:701865‑M2/121‑1 (MQ=255)
                                                                                                                aatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTGATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAg                             >  2:813102‑M2/28‑149 (MQ=255)
                                                                                                                aatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAg                             <  2:1595596‑M2/122‑1 (MQ=255)
                                                                                                                       ttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGc                      <  1:1271172‑M2/129‑1 (MQ=255)
                                                                                                                         gccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCgg                    <  1:88726‑M2/131‑1 (MQ=255)
                                                                                                                          ccagcgccgccttctgcCGTCACCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCCACGTAGTCCAGATCGCAAACCGCTTCGCCGTTCAGAATTCCGACAGAATCTGCGGc                   >  2:1016751‑M2/18‑149 (MQ=255)
                                                                                                                           cagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCt                  >  1:958949‑M2/17‑149 (MQ=255)
                                                                                                                                 cgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATc            >  1:1430784‑M2/11‑149 (MQ=255)
                                                                                                                                 cgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATc            <  1:1279238‑M2/139‑1 (MQ=255)
                                                                                                                                 cgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATc            <  1:1255974‑M2/139‑1 (MQ=255)
                                                                                                                                  gccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATcc           <  2:927729‑M2/140‑1 (MQ=255)
                                                                                                                                     ttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACCATTCCGCCAGCAACTGCGGCTACCATCCCtt        >  1:766135‑M2/7‑149 (MQ=255)
                                                                                                                                          cCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATc   >  2:1304642‑M2/2‑149 (MQ=255)
                                                                                                                                          cCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATc   <  2:1120215‑M2/148‑1 (MQ=255)
                                                                                                                                           cGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCg  <  2:958949/149‑1 (MQ=255)
                                                                                                                                           |                                                                                                                                                    
AAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCG  >  NC_000913/3815802‑3816089

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.