BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3883414 =	86 (0.950)	6 (0.070)	6/256	NT	7.1%	coding (316/1404 nt)	dnaA	chromosomal replication initiator protein DnaA, DNA‑binding transcriptional dual regulator
*	?	NC_000913	3883512 =	76 (0.900)	6 (0.070)	6/256	NT	7.1%	coding (218/1404 nt)	dnaA	chromosomal replication initiator protein DnaA, DNA‑binding transcriptional dual regulator

Only 100 of 109 total aligned reads displayed.

CGGGACGTTATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGCCACCTGTGCAGGGGCCGCGACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCGCCTGCAATGGGCGTAT  >  NC_000913/3883367‑3883654

cgggACGTTATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGCCACCTGTGCAGGGGCCGCGACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCtgtg                                                                                                                                             <  1:1230452/149‑1 (MQ=255)

 gggACGTTATCCCAACCAGAGCGCGTAGAAGGCGCAGCACGTTTCGGCTGCGTTTGCGCCACCTGTGCAGGGGCCGCGACGTTGCTCGTCACTGCCGCGTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTgg                                                                                                                                            <  1:644239/149‑1 (MQ=255)

  tatcaatggactgctaaccagtttctgcggagcggatgccccacaGCTGCGTTTGCTCCACCTGTGCAGGGGCCGCGACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTggg                                                                                                                                           >  1:1535685‑M1/46‑149 (MQ=255)

  gtaCGTTATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGGTTGCGCCACCTGTGCAGGGGCCGCGACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTggg                                                                                                                                           <  2:121160/147‑1 (MQ=255)

  ggACGTTATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGCCACCTGTGCAGGGGCCGCGACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTggg                                                                                                                                           <  1:1018721/149‑1 (MQ=255)

  ggACGTTATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGCCACCTGTGCAGGGGCCGCGACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTggg                                                                                                                                           <  2:692604/149‑1 (MQ=255)

   gACGTTATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGCCACCTGTGCAGGGGCCGCGACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTgggg                                                                                                                                          <  2:1102880/149‑1 (MQ=255)

      gTTCTCCCAACCTGCGCGCGTAGACGGCGCAGCACGTGGCGGCTGCGCTTGCGCCACCTGGGCAGGGGCCGCGACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTTGGGTGCCGACTTCAAAACGCAGCTGTGGGGCAt                                                                                                                                       <  1:266183/149‑1 (MQ=255)

      gTTATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGCCACCTGTGCAGGGGCCGCGACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCAt                                                                                                                                       >  1:1329718/1‑149 (MQ=255)

       ttATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGCCACCTGTGCAGGGCCCGCGACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGTTATGGTGCCGACTTCAAAACGCAGCTGTGGGGCAtc                                                                                                                                      >  2:131153/1‑149 (MQ=255)

       gtATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTGGCGGCTGCGTTTGCGCCACCTGTGCAGGGGCCGCGACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCAtc                                                                                                                                      <  1:679507/148‑1 (MQ=255)

        tATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGCCACCTGTGCAGGGGCCGCGACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCAtcc                                                                                                                                     >  2:199684/1‑149 (MQ=255)

           cccAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGCCACCTGTGCAGGGGCCGCGACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCAtccgct                                                                                                                                  >  1:214976/1‑149 (MQ=255)

            ccAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGCCACCTGTGCAGGGGCCGCGACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCAtccgctc                                                                                                                                 >  1:470019/1‑149 (MQ=255)

            ccAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGCCACCTGTGCAGGGGCCGCGACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCAtccgctc                                                                                                                                 <  2:666419/149‑1 (MQ=255)

             cAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGCCACCTGTGCAGGGGCCGCGACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCAtccgctcc                                                                                                                                >  1:1478451/1‑149 (MQ=255)

             cAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGCCACCTGTGCAGGGGCCGCGACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCAtccgctcc                                                                                                                                >  1:26387/1‑149 (MQ=255)

              aaCCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGCCACCTGTGCAGGGGCCGCGACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCAtccgctccg                                                                                                                               <  2:1584989/149‑1 (MQ=255)

              aaCCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGCCACCTGTGCAGGGGCCGCGACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCAtccgctccg                                                                                                                               <  2:941378/149‑1 (MQ=255)

                    aGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGCCACCTGTGCAGGGGCCGCGACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGaaa                                                                                                                         >  2:1033728/1‑149 (MQ=255)

                        cgTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGCCACCTGTGCAGGGGCCGCGACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTgg                                                                                                                     <  2:1456502/149‑1 (MQ=255)

                        cgTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGCCACCTGTGCAGGGGCCGCGACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTgg                                                                                                                     <  1:820655/149‑1 (MQ=255)

                           aGACGGCGCAGCACGGCGCGGCTGCGTTTGCGCCACCTGTGCAGGGGCCGCGACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTa                                                                                                                  <  1:233692/149‑1 (MQ=255)

                            gAATGCGCAGCACGTTGCGGCTGCGTGGGCGACACCTGTGCAGGGGCCGCGACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAg                                                                                                                 <  1:116993/149‑1 (MQ=255)

                            gAAGGCGCAGCACGTTGCGGCTGCGTTTGCGCCACCTGTGCAGGGGCCGCGACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAg                                                                                                                 >  2:114585/1‑149 (MQ=255)

                            gAAGGCGCAGCACGTTGCGGCTGCGTTTGCGCCACCTGTGCAGGGGCCGCGACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAg                                                                                                                 <  2:1062692/149‑1 (MQ=255)

                              cggCGCAGCACGTTGCGGCTGCGTTGGCGCCACCTGTGCAGCGGCCGCGACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTTTGCTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCa                                                                                                               <  1:66326/148‑1 (MQ=255)

                                     gcaCGTTGCGGCTGCGTTTGCGCCACCTGTGCAGGGGCCGCGACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGGTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGTAACTGGTTAGCAGTCCAtt                                                                                                        <  2:1496641/149‑1 (MQ=255)

                                     gcaCGTAGCGGCTGCGTTTGCGCCACCTGTGCAGGGGCCGCGACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCAtt                                                                                                        <  2:1360558/149‑1 (MQ=255)

                                       aCGTTGCGGCTGCGTTTGCGCCACCTGTGCAGGGGCCGCGACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGa                                                                                                      <  1:618818/149‑1 (MQ=255)

                                         gTTGCGGCGGCGTTTGCGCCACCTGTGCAGGGGCCGCGACGTTGCTCGTCACTGCCGCTTGTGGCGTTCGCGGCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGata                                                                                                    <  1:765178/149‑1 (MQ=255)

                                         cccacagctgcgttttgaagtcggcaccaaaccggtgacgcaaacgccacaagcggcagtgacgagcaacgtcgcggcccctgcacaggtggagcaaacgcagcTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGata                                                                                                    >  1:1535685‑M2/105‑149 (MQ=255)

                                            gCGGCTGCGTTTGCGCCACCTGTGCAGGGGCCGCGACGTTGCTCGTCACTGCCGCTTGGGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGAtatta                                                                                                 <  1:709946/149‑1 (MQ=255)

                                             cGGCTGCGGTTGCGCCACCTGTGCAGGTGCCGCGACGTTGCTCGTAACTGCCGCTTGTGGCGTTTGCGTCACAGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGAtattat                                                                                                <  1:459033/149‑1 (MQ=255)

                                              ggCTGCGTTTGCGCCACCTGTGCAGGGGCCGCGACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATattatt                                                                                               <  1:1471518/149‑1 (MQ=255)

                                                CTGCGTTTGCGCCACCTGTGCAGGGGCCGCGACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTaa                                                                                             >  1:913941‑M1/1‑149 (MQ=255)

                                                CTGCGTTTGCGCCACCTGTGCAGGGGCCGCGACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTaa                                                                                             >  1:303159‑M1/1‑149 (MQ=255)

                                                CTGCGTTTGCGCCACCTGTGCAGGGGCCGCGACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTaa                                                                                             >  2:1562880‑M1/1‑149 (MQ=255)

                                                CTGCGTTTGCGCCACCTGTGCAGGGGCCGCGACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTaa                                                                                             <  2:958920‑M1/149‑1 (MQ=255)

                                                 tgcgttttgaagtcggcaccaaaccggtgacgcaaacgccacaagcggcagtgacgagcaacgtcgcggcccctgcacaggtggcgcaaacgcagcTGTGGGGCATCCGCTCCGCAGAAACTGGGTAGCAGTCCATTGAGATTTTTAAg                                                                                            >  1:812886‑M2/97‑149 (MQ=255)

                                                 TGCGTTTGCGCCACCTGTGCAGGGGCCGCGACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAg                                                                                            >  1:169466‑M1/1‑149 (MQ=255)

                                                   CGTTTGCGCCAACTGGGCAGGGGGCGCGTCGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTTTGGTTCCGACTTCAAAACGCAGCTGTTGGGCATCCGCTCCGGAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGt                                                                                          >  2:523734‑M1/1‑149 (MQ=255)

                                                     ttttgaagtcggcaccaaaccggtgacgcaaacgccacaagcggcagtgacgagcaacgtcgcggcccctgcacaggtggcgcaaacgcagcTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTAc                                                                                        >  2:1251633‑M2/93‑149 (MQ=255)

                                                     TTTGCGCCACCTGTGCAGGGGCCGGGACGTTGCTCGTCACTGCCGCTGGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATTTTATTAAGGTAc                                                                                        >  1:733194‑M1/1‑149 (MQ=255)

                                                     TTTGCGCCACCTGTGCAGGGGCCGCGACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTAc                                                                                        <  1:1330591‑M1/149‑1 (MQ=255)

                                                         gaagtcggcaccaaaccggtgacgcaaacgccacaagcggcagtgacgagcaacgtcgcggcccctgcacaggtggcgcaaacgcagcTGTGGGGCATCCGCTCCGCAGACACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGt                                                                                    >  1:448801‑M2/89‑149 (MQ=255)

                                                         cgcCACCTGTGCAGGGGCCGCGACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTGAGCAGTCCATTGATATTATTAAGGTACTTGt                                                                                    >  1:58209/1‑149 (MQ=255)

                                                          gcCACCTGTGCAGGGGCCGCGACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTc                                                                                   <  2:1563655/149‑1 (MQ=255)

                                                          gcCACCTGTGCAGGGGCCGCGACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTc                                                                                   <  2:1460899/149‑1 (MQ=255)

                                                          gcCACCTGTGCAGGGGCCGCGACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTc                                                                                   <  1:199684/149‑1 (MQ=255)

                                                           ccACCTGTGCAGGGGCCGCGACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTcc                                                                                  <  1:549031/149‑1 (MQ=255)

                                                               cTGTGCAGGGGCCGCGACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTa                                                                              <  2:1541812/149‑1 (MQ=255)

                                                                      ggggCCGCGACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATc                                                                       <  1:1258486/149‑1 (MQ=255)

                                                                       gggCCGCGACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCg                                                                      <  2:258091/149‑1 (MQ=255)

                                                                         gCCGCGACGTTGCTCGTCACTGCCGCTTGTAGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAg                                                                    <  2:1260678/149‑1 (MQ=255)

                                                                          ccGCGACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTccc                                                                                 <  1:1003187/135‑1 (MQ=255)

                                                                          ccGCGACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTccc                                                                                 >  2:1003187/1‑135 (MQ=255)

                                                                           cgcgACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGa                                                                  >  2:184964/1‑149 (MQ=255)

                                                                           cgcgACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGAAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGa                                                                  >  2:1057806/1‑149 (MQ=255)

                                                                             cgACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACa                                                                <  2:736912/149‑1 (MQ=255)

                                                                             cgACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACa                                                                >  2:605159/1‑149 (MQ=255)

                                                                                cGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACaaaa                                                             >  1:1508588/1‑149 (MQ=255)

                                                                                     cTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGtt                                                        <  1:1046135/149‑1 (MQ=255)

                                                                                      tCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGttt                                                       >  2:1033140/1‑149 (MQ=255)

                                                                                      tCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGttt                                                       >  1:629682/1‑149 (MQ=255)

                                                                                      tCGTCACAGCCGCTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGACCCGTACCCAATAGAGGACAAAACGGttt                                                       >  2:906276/1‑149 (MQ=255)

                                                                                       ggTCACTGCCGCTTGTGGCGGTTGAGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGTTATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTg                                                      <  1:273849/148‑1 (MQ=255)

                                                                                         gcACTGCCGCGTGTGGCTGTTGCCGCACCGGTTTGGTGCCGACTTCAAAACGCCGCTGTGGGGCATCCGCTCCGCAGAAACTGGGTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGgc                                                    <  2:291746/148‑1 (MQ=255)

                                                                                           aCTGCCGCTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGgcgc                                                  <  2:629682/149‑1 (MQ=255)

                                                                                                  cTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAgg                                           <  2:34735/149‑1 (MQ=255)

                                                                                                  cTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAgg                                           <  2:153318/149‑1 (MQ=255)

                                                                                                   ttGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAggg                                          <  2:333947/149‑1 (MQ=255)

                                                                                                      gggCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCa                                       <  2:799417/148‑1 (MQ=255)

                                                                                                          gcaacgtcgcggcccctgcacaggtggcgcaaacgcagcTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCTGCgt                                   >  2:352956‑M2/40‑149 (MQ=255)

                                                                                                              gCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACtt                                                                                      <  2:1060426/94‑1 (MQ=255)

                                                                                                              gCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACtt                                                                                      >  1:1060426/1‑94 (MQ=255)

                                                                                                              gCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTa                               <  2:1329718/149‑1 (MQ=255)

                                                                                                                     gcccctgcacaggtggcgcaaacgcagcTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCa                        <  1:1251633‑M2/121‑1 (MQ=255)

                                                                                                                     cGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGATGAAAAAAAGGTTTGGCGCGTACAGGGCCAGCGTGTTATCTCTCa                        >  2:1410836/1‑149 (MQ=255)

                                                                                                                     cGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCa                        >  2:1507237/1‑149 (MQ=255)

                                                                                                                       gTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGt                      <  2:26387/149‑1 (MQ=255)

                                                                                                                         ttGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCAGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTc                    <  1:721039/149‑1 (MQ=255)

                                                                                                                           ggTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCg                  >  1:767634/1‑149 (MQ=255)

                                                                                                                           ggTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCg                  >  1:1524137/1‑149 (MQ=255)

                                                                                                                            gTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCGc                 >  2:538521/1‑149 (MQ=255)

                                                                                                                             tGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCGcc                >  1:298210/1‑149 (MQ=255)

                                                                                                                              gCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCGCCt               <  1:1572755/149‑1 (MQ=255)

                                                                                                                                 gACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCGCCTGCa            >  1:7368/1‑149 (MQ=255)

                                                                                                                                     tCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCGCCTGCAATgg        >  2:892578/1‑149 (MQ=255)

                                                                                                                                     tCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCGCCTGCAATgg        >  2:898883/1‑149 (MQ=255)

                                                                                                                                      gcaaacgcagcTGTGGGGCATCCGCTCGGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTTCTTGTCCCGTACCCAATCGAGGACAAATCGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCGCCTGCAATggg       <  2:1535685‑M2/138‑1 (MQ=255)

                                                                                                                                      cAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCGCCTGCAATggg       >  1:1104355/1‑149 (MQ=255)

                                                                                                                                       aaaaCGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCGCCTGCAATGGGc      >  2:555658/1‑149 (MQ=255)

                                                                                                                                       aaaaCGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCGCCTGCAATGGGc      <  1:439116/149‑1 (MQ=255)

                                                                                                                                       aaaaCGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCGCCTGCAATGGGc      >  2:1072388/1‑149 (MQ=255)

                                                                                                                                       aaaaCGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCCTGTTATCGCTCAGTTCCGCCTGCAATGGGc      >  2:778647/1‑149 (MQ=255)

                                                                                                                                        aaacgcagcTGTGGGGCATCCGCTCCGCAGAACCTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCAGTACACAATCGAGGAAAAAACGGTTTAGAGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCGCCTGCAATGGGCg     >  2:1218459‑M2/10‑149 (MQ=255)

                                                                                                                                        aaacgcagcTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCGCCTGCAATGGGCg     >  2:940814‑M2/10‑149 (MQ=255)

                                                                                                                                          acgcagcTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCGCCTGCAATGGGCGTa   <  2:214976‑M2/142‑1 (MQ=255)

                                                                                                                                           cgcagcTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGAAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCGCCTGCAATGGGCGTAt  >  1:1214127‑M2/7‑149 (MQ=255)

CGGGACGTTATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGCCACCTGTGCAGGGGCCGCGACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCGCCTGCAATGGGCGTAT  >  NC_000913/3883367‑3883654

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.