New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4377070 =84 (0.930)5 (0.060) 3/262 NT 6.2% coding (196/318 nt) sugE multidrug efflux system protein
?NC_000913 4377134 = 70 (0.810)coding (260/318 nt) sugE multidrug efflux system protein

Only 100 of 101 total aligned reads displayed.

CGATGATTGTCAGTATGGCGCTACTTGCCTGGGCGATGAAATCGTTACCAGTAGGGACGGCTTATGCCGTGTGGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCACTAACTACCAGGCTGCTGTACCCAAATAAATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCACTTCGTCA  >  NC_000913/4376987‑4377279
                                                                                                                                                   |                                                                                                                                                 
tatttgggtacagcagcctggtagttagggagtgctgagtttcagaccaataatccccaatacgaataacgccagactcgccaGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTg                                                                                                                                                  >  2:382746‑M1/84‑149 (MQ=255)
tatttgggtacagcagcctggtaggtagtgagtgctgagtttcagaccaataatccccaatacgattaacgccagactcgccaGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTg                                                                                                                                                  >  2:712572‑M1/84‑149 (MQ=255)
 gatgatTGTCAGTATGGCGCTACTTGCCTGGGCGATGAAATCGTTACCAGTAGGGACGGCTTATGCCGTGTGGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTgg                                                                                                                                                 >  2:1342569/1‑149 (MQ=255)
 gatgatTGTCAGTATGGCGCTACTTGCCTGGGCGATGAAATCGTTACCAGTAGGGACGGCTTATGCCGTGTGGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTgg                                                                                                                                                 >  1:963203/1‑149 (MQ=255)
 gatgatTGTCAGTATGGCGCTACTTGCCTGGGCGATGAAATCGTTACCAGTAGGGACGGCTTATGCCGTGTGGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTgg                                                                                                                                                 >  1:1230617/1‑149 (MQ=255)
 gatgatTGTCAGTATGGCGCTACTTGCCTGGGCGATGAAATCGTTACCAGTAGGGACGGCTTATGCCGTGTGGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTgg                                                                                                                                                 >  1:1268912/1‑149 (MQ=255)
 atttgggtacagcagcctggtagttagtgagtgctgagtttcagaccaataatccccaatacgattaacgccagactcgccaGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTgg                                                                                                                                                 >  1:600553‑M1/83‑149 (MQ=255)
 atttgggtacagcagcctggtagttagtgagtgctgagtttcagaccaataatccccaatacgattaacgccagactcgccaGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTgg                                                                                                                                                 >  1:353559‑M1/83‑149 (MQ=255)
  atgatTGTCAGTATGGCGCTACTTGCCTGGGCGATGAAATCGTTACCAGTAGGGACGGCTTATGCCGTGTGGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGc                                                                                                                                                <  1:1133679/149‑1 (MQ=255)
  atgatTGTCAGTATGGCGCTACTTGCCTGGGCGATGAAATCGTTACCAGTAGGGACGGCTTATGCCGTGTGGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCAGCTAACCCGATGCGCCTGGc                                                                                                                                                >  2:1098502/1‑149 (MQ=255)
    gatTGTCAGTATGGCGCTACTTGCCGGGGCGATGAAATCGTTACCAGTAGGGACGGCTTATGCCGTGTGGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGa                                                                                                                                              <  2:531132/149‑1 (MQ=255)
         tCAGTATGGCGCTACTTGCCTGGGCGATGAAATCGTTACCAGTAGGGACGGCTTATGCCGTGTGGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTg                                                                                                                                         >  1:967395/1‑149 (MQ=255)
           aGTATGGCGCTACTTGCCTGGGCGATGAAATCGTTACCAGTAGGGACGGCTTATGCCGTGTGGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGc                                                                                                                                       >  2:1221197/1‑149 (MQ=255)
           aGTATGGCGCTACTTGCCTGGGCGATGAAATCGTTACCAGTAGGGACGGCTTATGCCGTGTGGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGc                                                                                                                                       >  1:1321827/1‑149 (MQ=255)
           aGTATGGCGCTACTTGCCTGGGCGATGAAATCGTTACCAGTAGGGACGGCTTATGCCGTGTGGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGc                                                                                                                                       <  2:1562871/149‑1 (MQ=255)
             tATGGCGCTACTTGCCTGGGCGATGAAATCGTTACCAGTAGGGACGGCTTATGCCGTGTGGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGCTGCGCCTGGCGAGTCTGGCGt                                                                                                                                     >  1:163200/1‑149 (MQ=255)
             tATGGCGCTACTTGCCTGGGCGATGAAATCGTTACCAGTAGGGACGGCTTATGCCGTGTGGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGt                                                                                                                                     >  2:544178/1‑149 (MQ=255)
             cagcctggtaggtagtgagtgctgagtttcagaccaataatccccaatacgatgaacgccacactcgccaGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGt                                                                                                                                     >  2:795604‑M1/71‑149 (MQ=255)
                  cgcTACTTGCCTGGGCGATGAAATCGTTACCAGTAGGGACGGCTTATGCCGTGTGGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATc                                                                                                                                <  2:510364/149‑1 (MQ=255)
                  cgcTACTTGCCTGGGCGATGAAATCGTTACCAGTAGGGACGGCTTATGCCGTGTGGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATc                                                                                                                                <  2:75824/149‑1 (MQ=255)
                       cTTGCCTGGGCGATGAAATCGTTACCAGTAGGGACGGCTTATGCCGTGTGGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTAtt                                                                                                                           >  2:1361438/1‑149 (MQ=255)
                        ttGCCTGGGCGATGAAATCGTTACCAGTAGGGACGGCTTATGCCGTGTGGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTg                                                                                                                          <  1:1487665/149‑1 (MQ=255)
                        ttGCCTGGGCGATGAAATCGTTACCAGTAGGGACGGCTTATGCCGTGTGGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTg                                                                                                                          <  2:1600037/149‑1 (MQ=255)
                        ttGCCTGGGCGATGAAATCGTTACCAGTAGGGACGGCTTATGCCGTGTGGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTg                                                                                                                          >  2:1320379/1‑149 (MQ=255)
                         tGCCTGGGCGATGAAATCGTTACCAGTCGGGACGGCTTATGCCGTGTGGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTgg                                                                                                                         <  1:1252691/149‑1 (MQ=255)
                         tGCCTGGGCGATGAAATCGTTACCAGTAGGGACGGCTTATGCCGTGTGGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTgg                                                                                                                         <  2:399186/149‑1 (MQ=255)
                         tGCCTGGGCGATGAAATCGTTACCAGTAGGGACGGCTTATGCCGTGTGGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTgg                                                                                                                         <  1:474499/149‑1 (MQ=255)
                          gCCTGGGCGATGAAATCGTTACCAGTAGGGACGGCTTATGCAGTGTGGACGGGTATTGGCGAAGTCGGAGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTTGCGAGTCTGGCGTTAATCGTATTggg                                                                                                                        >  2:863536/1‑149 (MQ=255)
                            cTGGGTGATGAAATCGTTACCAGTAGGGACGGCTTATGCCGTGTGGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGa                                                                                                                      >  1:1486762/1‑149 (MQ=255)
                                gCGATGAAATCGTTACCAGTAGGGACGGCTTATGCCGTGTGGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGattat                                                                                                                  <  1:434397/149‑1 (MQ=255)
                                 cGATGAAATCGTTACCAGTAGGGACGGCTTATGCCGTGTGGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGattatt                                                                                                                 <  1:735769/149‑1 (MQ=255)
                                    tGAAATCGTTACCAGTAGGGACGGCTTATGCCGTGTGGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGt                                                                                                              <  2:75083/149‑1 (MQ=255)
                                      aaaTCGTTACCAGTAGGGACGGCTTATGCCGTGTGGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGt                                                                                                              <  1:1158681/147‑1 (MQ=255)
                                      aaaTCGTTACCAGTAGGGACGGCTTATGCCGTGTGGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGt                                                                                                              >  2:1158681/1‑147 (MQ=255)
                                      aaaTCGTTACCAGTAGGGACGGCTTATGCCGTGTGGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCt                                                                                                            <  1:155781/149‑1 (MQ=255)
                                      aaaTCGTTACCAGTAGGGACGGCTTATGCCGTGTGGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCt                                                                                                            <  1:1111068/149‑1 (MQ=255)
                                        aTCGTTACCAGTAGGGACGGCTTATGCCGTGTGGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTTTTGGGGATTATTGGTCTGa                                                                                                          >  1:1259095/1‑149 (MQ=255)
                                           gTTACCAGTAGGGACGGCTTATGCCGTGTGGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAAc                                                                                                       <  2:963203/149‑1 (MQ=255)
                                            ttACCAGTAGGGACGGCTTATGCCGTGTGGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACt                                                                                                      >  2:727998/1‑149 (MQ=255)
                                            ttACCAGTAGGGACGGCTTATGCCGTGTGGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGCCGTTAATCGTATTGGGGATTATTGGTCTGAAACt                                                                                                      >  1:246610/1‑149 (MQ=255)
                                            ttACCAGTAGGGACGGCTTATGCCGTGTGGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGAAGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACt                                                                                                      >  2:693006/1‑149 (MQ=255)
                                              aCCAGTAGGGACGGCTTATGCCGTGTGGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCa                                                                                                    <  1:1446847/149‑1 (MQ=255)
                                               ccAGTAGGGACGGCTTATGCCGTGTGGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAg                                                                                                   >  1:272210/1‑149 (MQ=255)
                                                  gTAGGGACGGCTTATGCCGTGTGGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGcac                                                                                                >  2:695484/1‑149 (MQ=255)
                                                     gggACGGCTTATGCCGTGTGGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGcactca                                                                                             <  2:278800/149‑1 (MQ=255)
                                                     gggACGGCTTATGCCGTGTGGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGcactca                                                                                             >  2:1103515/1‑149 (MQ=255)
                                                           gCTTATGCCGTGTGGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCactaact                                                                                       >  2:667844/1‑149 (MQ=255)
                                                             ttATGCCGTGTGGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGt                                                                                                              <  1:1141547/124‑1 (MQ=255)
                                                             ttATGCCGTGTGGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGt                                                                                                              >  2:1141547/1‑124 (MQ=255)
                                                             ttATGCCGTGTGGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCACTAACTAc                                                                                     <  2:438386/149‑1 (MQ=255)
                                                              tATGCCGTGTGGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCTGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCACTAACTAcc                                                                                    <  1:1098502/149‑1 (MQ=255)
                                                              tATGCCGTGTGGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCACTAACTAcc                                                                                    <  1:1363965/149‑1 (MQ=255)
                                                               aTGCCGTGTGGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCACTAACTACCa                                                                                   <  2:1321827/149‑1 (MQ=255)
                                                                  ccGTGTGGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCACTAACTACCAGgc                                                                                >  1:194233/1‑149 (MQ=255)
                                                                    gtgtGGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCACTAACTACCAGgctg                                                                              <  1:1342569/149‑1 (MQ=255)
                                                                    acgccagactcgccaggcgcatcgggttagcggactcaccgagcagcacaatgccggttatggccgcgccgactgcgccTGGCGAGTGTGGCGTTCATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCACTACCTACCAGgctg                                                                              >  2:795604‑M2/80‑149 (MQ=255)
                                                                      gtgGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCACTAACTACCAGgctgct                                                                            <  1:1320379/149‑1 (MQ=255)
                                                                       tgGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCACTAACTACCAGGctgctg                                                                           >  2:937255/1‑149 (MQ=255)
                                                                            gggTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCACTAACTACCAGgctg                                                                              >  1:933951/1‑141 (MQ=255)
                                                                            gggTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCACTAACTACCAGgctg                                                                              <  2:933951/141‑1 (MQ=255)
                                                                                ccaggcgcatcgggttagcggactcaccgagcagcacaatgccggttatggccgcgccgactgcgccTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCACTAACTACCAGGCTGCTGTACCCaaat                                                                  >  1:600553‑M2/68‑149 (MQ=255)
                                                                                ccaggcgcatcgggttagcggactcaccgagcagcacaatgccggttatggccgcgccgactgcgccTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCACTAACTACCAGGCTGCTGTACCCaaat                                                                  >  1:353559‑M2/68‑149 (MQ=255)
                                                                                 caggcgcatcgggttagcggactcaccgagcagcacaatgccggttatggccgcgccgactgcgccTGGCGAGTCTGGCGTTATTCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCCCTAACTACCAGGCTGCTGTACCCaaata                                                                 >  2:382746‑M2/67‑149 (MQ=255)
                                                                                 caggcgcatcgggttagcggactcaccgagcagcacaatgccggttatggccgcgccgactgcgccTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCACTACCTACCAGGCTGCTGTACCCaaata                                                                 >  2:712572‑M2/67‑149 (MQ=255)
                                                                                    GCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAGCTCCGCCCTCACTAACTACCAGGCTGCTGTAGCCaaataaat                                                              <  1:151003‑M1/149‑1 (MQ=255)
                                                                                    GCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCACTAACTACCAGGCTGCTGTACCCaaataaat                                                              >  2:433134‑M1/1‑149 (MQ=255)
                                                                                    GCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCACTAACTACCAGGCTGCTGTACCCaaataaat                                                              <  1:306974‑M1/149‑1 (MQ=255)
                                                                                    GCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCACTAACTACCAGGCTGCTGTACCCaaataaat                                                              <  2:124476‑M1/149‑1 (MQ=255)
                                                                                             gcgcGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCACTAACTACCAGGCTGCTGTACCCAAATAAATTTACTGACa                                                     >  2:230364/1‑149 (MQ=255)
                                                                                              cgcgGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGCTGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATGATTGGTCTGCAACTCAGCACTCACTATCTACCAGGCTGCTGTCCCCAAATAAATTTACTGACAt                                                    >  1:286739/1‑149 (MQ=255)
                                                                                              cgcgGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCACTAACTACCAGGCTGCTGTACCCAAATAAATTTACTGACAt                                                    <  2:136435/149‑1 (MQ=255)
                                                                                              cgcgGCCATAACCGGCATGGTGCTGCTCGGTGAGGCCGCTAACCCGATGCGCCTGGCGAGTCGGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCACTTACTACCAGGCTGCTGTCCCCAAATAAATTTACTGACAt                                                    <  2:271197/149‑1 (MQ=255)
                                                                                                cgGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCACTAACTACCAGGCTGCTGTACCCAAATAAATTTACTGACATCa                                                  >  1:1449851/1‑149 (MQ=255)
                                                                                                  gCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCACTAACTACCAGGCTGCTGTACCCAAATAAATTTACTGACATCaaa                                                <  1:727998/149‑1 (MQ=255)
                                                                                                  gCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCACTAACTACCAGGCTGCTGTACCCAAATAAATTTACTGACATCaaa                                                <  1:1195513/149‑1 (MQ=255)
                                                                                                    cATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCACTAACTACCAGGCTGCTGTACCCAAATAAATTTACTGACATCAAAcc                                              <  1:51642/149‑1 (MQ=255)
                                                                                                    cATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGGCTGAAACTCAGCACTCACTAACTACCAGGCTGCTGTACCCAAATAAATTTACTGACATCAAAcc                                              <  2:1082295/149‑1 (MQ=255)
                                                                                                     aTAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCACTAACTACCAGGCTGGTGTACCCAAATAAATTTACTGACATCAAAccc                                             >  1:1545656/1‑149 (MQ=255)
                                                                                                        aCCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGAGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCCCTAACTCCCAGGCTGCTGTACCCAAATAAATTTACTGACATCAAACCCtac                                          >  2:1077189/1‑147 (MQ=255)
                                                                                                          cGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCACTAACTACCAGGCTGCTGTACCCAAATAAATTTACTGACATCAAACCCTTCCC                                        >  1:1169800‑M1/1‑149 (MQ=255)
                                                                                                            gCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCACTAACTACCAGGCTGCTGTACCCAAATAAATTTACTGACATCAAACCCTTCCCGG                                      <  1:1103515‑M1/149‑1 (MQ=255)
                                                                                                            gCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCACTAACTACCACGCTGCTGTACCCAAATAAATTTACTGACATCAAACCCTTCCCGG                                      >  2:1167934‑M1/1‑149 (MQ=255)
                                                                                                            gCATTGTGCTGCTCGGGGAGTCAGCTAACCCGATGCGCCTGGCGAGTATGGCGTTAATCGTATTGGGGATTATTTGTCTGAAACTCAGCACTCACTAACTACCAGGCTGCTGTACCAAAATAAATTTACTGACATCAAACCCTTCCCtg                                      <  2:1341525‑M1/149‑3 (MQ=255)
                                                                                                                   gctgctCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCACTAACTACCAGGCTGCTGTACCCAAATAAATTTACTGACATCAAACCCTTCCCGGGTCGCGa                               <  2:1268912/149‑1 (MQ=255)
                                                                                                                          ggTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCACTAACTACCAGGCTGCTGTACCCAAATAAATTTACTGACATCAAACCCTTCCCGGGCCGCGACTGCCAg                        <  2:1449851/149‑1 (MQ=255)
                                                                                                                                tCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCACTAACTACCAGGCTGCTGTACCCAAATAAATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCAtctc                  <  2:1486762/149‑1 (MQ=255)
                                                                                                                                tCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCACTAACTACCAGGCTGCTGTACCCAAATAAATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCAtctc                  >  2:1161336/1‑149 (MQ=255)
                                                                                                                                 ccGCTAACCCGATGCGCCTGGCGAGGCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCACTAACTACCAGGCTGCTGTACCCAAATAAATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTcc                 <  1:616384/149‑1 (MQ=255)
                                                                                                                                  cgcgAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCACTAACTACCAGGCTGCTGTACCCAAATAAATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCt                <  1:908469/149‑1 (MQ=255)
                                                                                                                                    cTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCACTAACTACCAGGCTGCTGTACCCAAATAAATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGt              <  2:1418137/149‑1 (MQ=255)
                                                                                                                                    cTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCACTAACTACCAGGCTGCTGTACCCAAATAAATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGt              <  1:667844/149‑1 (MQ=255)
                                                                                                                                     tAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCACTAACTACCAGGCTGCTGTACCCAAATAAATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGtt             >  1:960338/1‑149 (MQ=255)
                                                                                                                                      aaCCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCACTAACTACCAGGCTGCTGTACCCAAATAAATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGttt            <  2:194233/149‑1 (MQ=255)
                                                                                                                                        cccGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCACTAACTACCAGGCTGCTGTACCCAAATAAATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCa          <  2:306974/149‑1 (MQ=255)
                                                                                                                                        cccGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCACTAACTACCAGGCTGCTGTACCCAAATAAATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCa          <  1:544178/149‑1 (MQ=255)
                                                                                                                                         ccGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCACTAACTACCAGGCTGCTGTACCCAAATAAATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCAc         <  1:989723/149‑1 (MQ=255)
                                                                                                                                          cGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCACTAACTACCAGGCTGCTGTACCCAAATAAATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCACt        <  2:367636/149‑1 (MQ=255)
                                                                                                                                            aTGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCACTAACTACCAGGCTGCTGTACCCAAATAAATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCACTTc      <  1:693006/149‑1 (MQ=255)
                                                                                                                                             tgcgccTGGCGAGTCAGGCGTTATACGTATTGGGGATTATTGGGCTGAAACTCAGCACTCACTAACTACCAGGCTGCTGTACCCAAATAAATTTCCTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCACTTCg     <  1:282528‑M2/143‑1 (MQ=255)
                                                                                                                                                gccTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCACTAACTACCAGGCTGCTGTACCCAAATAAATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCACTTCGTCa  <  2:967395‑M2/146‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                 
CGATGATTGTCAGTATGGCGCTACTTGCCTGGGCGATGAAATCGTTACCAGTAGGGACGGCTTATGCCGTGTGGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCACTAACTACCAGGCTGCTGTACCCAAATAAATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCACTTCGTCA  >  NC_000913/4376987‑4377279

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.