New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4556802151 (1.670)5 (0.060) 5/258 NT 3.4% intergenic (‑482/‑191) yjiC/iraD uncharacterized protein/RpoS stabilzer after DNA damage, anti‑RssB factor
?NC_000913 = 4556808 144 (1.700)intergenic (‑488/‑185) yjiC/iraD uncharacterized protein/RpoS stabilzer after DNA damage, anti‑RssB factor
Rejected: Frequency below/above cutoff threshold.

Only 100 of 173 total aligned reads displayed.

TTATGCGGAAATAAATAATTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCA  >  NC_000913/4556662‑4556956
                                                                                                                                                     |                                                                                                                                                    
  aTGCGGAAATAAATAATTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGaaaa                                                                                                                                                  >  2:490484‑M2/1‑145 (MQ=255)
   tGCGGAAATAAATAATTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATAAAATCATGACTTTTTTCCTGaaaag                                                                                                                                                 <  2:930245‑M2/149‑6 (MQ=255)
     cGGAAATAAATAATTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGaaaagtc                                                                                                                                               <  1:299159‑M2/149‑8 (MQ=255)
     cGGAAATAAATAATTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGaaaagtc                                                                                                                                               >  2:425375‑M2/1‑142 (MQ=255)
     cGGAAATAAATAATTTCCAACAGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCTGAATATTCATAATATACTAGCGGTTTTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTCTCCTGaaaa                                                                                                                                                  >  2:1409254‑M2/1‑145 (MQ=255)
      ggAAATAAATAATTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGaaaagtca                                                                                                                                              <  2:608990‑M2/149‑9 (MQ=255)
      ggAAATAAATAATTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTAAGAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGaaaagtca                                                                                                                                              >  1:185593‑M2/1‑141 (MQ=255)
         aataaataATTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTa                                                                                                                                           <  2:682786/149‑1 (MQ=255)
         aataaataATTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTa                                                                                                                                           <  1:1287362/149‑1 (MQ=255)
           taaataaTTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGa                                                                                                                                         <  1:517294/149‑1 (MQ=255)
           taaataaTTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGa                                                                                                                                         <  1:1402804/149‑1 (MQ=255)
              ataatTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGatat                                                                                                                                      >  1:506873/1‑149 (MQ=255)
              ataatTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGatat                                                                                                                                      >  2:412271/1‑149 (MQ=255)
               taatTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTTGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGAATTTTTTCCTGAAAAGTAAGTAGAtttt                                                                                                                                     >  2:219972/1‑149 (MQ=255)
                aatTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTc                                                                                                                                    >  2:542142/1‑149 (MQ=255)
                 atTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCa                                                                                                                                   <  1:1520460/149‑1 (MQ=255)
                  tttCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCAt                                                                                                                                  <  2:299159/149‑1 (MQ=255)
                  attCCCACCGGAATTAAGTAGAAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCTGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCAt                                                                                                                                  <  2:1026376/148‑1 (MQ=255)
                   ttCCCACCTGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTATCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATa                                                                                                                                 <  2:724963/149‑1 (MQ=255)
                    tCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAg                                                                                                                                <  1:1238867/149‑1 (MQ=255)
                     cccACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAgg                                                                                                                               <  1:470481/149‑1 (MQ=255)
                       cACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCa                                                                                                                             >  2:171845/1‑149 (MQ=255)
                        aCCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCaa                                                                                                                            <  1:624431/149‑1 (MQ=255)
                        aCCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCaa                                                                                                                            >  2:757997/1‑149 (MQ=255)
                        aCCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCaa                                                                                                                            <  1:1025445/149‑1 (MQ=255)
                         ccGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCaat                                                                                                                           >  2:1279202/1‑148 (MQ=255)
                            taaTTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTaa                                                                                                                        <  2:228640/148‑1 (MQ=255)
                            gAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTaa                                                                                                                        <  2:847961/149‑1 (MQ=255)
                            gAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTaa                                                                                                                        <  1:996824/149‑1 (MQ=255)
                            gAATAAAGTAGCACCGGTGACAAGTAAATTCATCTACGTAACTATTCGGAATATTCACAATATACTAGCGGTTATTTTAA‑‑‑GATTTTCATGATTTATATAAAATCATAACTTTTTTAATGAAAAGTCAGAAGATAATAAAAGTCAAGTaa                                                                                                                        >  2:1156564/1‑149 (MQ=255)
                               ttAAGACGCTGCGTTGAAAAGTATTTTCATCTACTTAACTATTCGTATTATTCATAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGt                                                                                                                     <  1:1169043/149‑1 (MQ=255)
                                   gTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTta                                                                                                                 <  1:717619/149‑1 (MQ=255)
                                        agcGGTTACAAGTATTTTCATCTACGTAACTATTCGGAATATTCATAATATAGTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCATATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACtt                                                                                                            <  1:840712/149‑1 (MQ=255)
                                        agcGGTGACAAGTATTTTCATCTACGTAACTATTCGTAATATTCAGAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACtt                                                                                                            <  1:413032/149‑1 (MQ=255)
                                        agcGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACtt                                                                                                            <  1:1325276/149‑1 (MQ=255)
                                         gcGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACttt                                                                                                           <  1:1160967/149‑1 (MQ=255)
                                            gTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCt                                                                                                        <  1:672078/149‑1 (MQ=255)
                                              gACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGa                                                                                                      <  2:973383/149‑1 (MQ=255)
                                                 aaGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAg                                                                                                   >  2:1216742/1‑149 (MQ=255)
                                                 aaGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTAATAGGCAAGTAAGGTTTTATACTTTGATGACat                                                                                                   >  1:907722/1‑148 (MQ=255)
                                                   gTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGa                                                                                                 >  1:314320/1‑149 (MQ=255)
                                                      ttttCATCTACGTAACTATTCGGAATATTCAGAATATACTATCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTTGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTc                                                                                              >  2:290740/1‑149 (MQ=255)
                                                        ttCATCTACGTAACTATTCGGAATATTCATAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTTATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAg                                                                                            <  1:123656/149‑1 (MQ=255)
                                                        ttCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAg                                                                                            <  2:338761/149‑1 (MQ=255)
                                                        ttCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAg                                                                                            <  1:401499/149‑1 (MQ=255)
                                                                   aaCTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTACTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAg                                                                                 >  2:239148/1‑149 (MQ=255)
                                                                    aCTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGa                                                                                >  2:450027/1‑149 (MQ=255)
                                                                      tATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACt                                                                              <  1:207145/149‑1 (MQ=255)
                                                                      tATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACt                                                                              <  1:915830/149‑1 (MQ=255)
                                                                       aTTCGGAATATTCAGAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTg                                                                             >  2:932429/1‑149 (MQ=255)
                                                                        ttCGGAATATTCAGAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGa                                                                            >  2:649183/1‑149 (MQ=255)
                                                                           ggAATATTCAGAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACAt                                                                         <  2:1368720/149‑1 (MQ=255)
                                                                            gAATATTCAGAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATg                                                                        >  2:383972/1‑149 (MQ=255)
                                                                             aaTATTCAGAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATgg                                                                       <  1:1136265/149‑1 (MQ=255)
                                                                               tatTCAGAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGAt                                                                     <  2:965240/149‑1 (MQ=255)
                                                                                atTCAGAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATg                                                                    >  2:1408203/1‑149 (MQ=255)
                                                                                 ttCAGAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGt                                                                   >  2:1233928/1‑149 (MQ=255)
                                                                                  tCAGAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTa                                                                  <  1:27968/149‑1 (MQ=255)
                                                                                   cAGAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTaa                                                                 <  1:166237/149‑1 (MQ=255)
                                                                                   cAGAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTaa                                                                 <  1:84878/149‑1 (MQ=255)
                                                                                   cAGAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGGTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTaa                                                                 <  1:117220/149‑1 (MQ=255)
                                                                                   aaGAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTaa                                                                 <  2:1169157/148‑1 (MQ=255)
                                                                                   aaGAAAATACTAGCGGTTTTTTTTT‑‑‑GAGTTTTATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATATGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTaa                                                                 <  1:1198806/148‑1 (MQ=255)
                                                                                        tataCTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAAc                                                            <  2:465232/149‑1 (MQ=255)
                                                                                            cTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCAGAGGCAAGTAAGGGTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGGAAGGAGCataa                                                        >  2:1397835/1‑149 (MQ=255)
                                                                                              aGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAgg                                                      <  1:757997/149‑1 (MQ=255)
                                                                                               gCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATAAAATCATGCCTTTTTTCCTGAAAAGTCAGTAGATATTAATATGCAAGTAAGTTGTTATACATTGCTGACATGATTAATTAATGTATCAGACTGACATTGATGTAATGAACAAAAtgg                                                     >  1:133597/1‑149 (MQ=255)
                                                                                                   ttttttttt‑‑‑GAGTTTGATGAATTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATg                                                 >  2:577564/1‑149 (MQ=255)
                                                                                                    tttttttt‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGAATTACATAGGCAAGTAAGGTTTTATACTTTGCTTACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATgg                                                <  2:1522238/149‑1 (MQ=255)
                                                                                                        tttt‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTAt                                            <  1:1075607/149‑1 (MQ=255)
                                                                                                        tttt‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTAt                                            <  1:608990/149‑1 (MQ=255)
                                                                                                                 ttttGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGaaaa                                      <  1:1596464/148‑1 (MQ=255)
                                                                                                                 gTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGaaaa                                      <  2:275838/149‑1 (MQ=255)
                                                                                                                  tttGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTTAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACTTGGATGTAATGAACAAAAGGGAATGGCTATGGAAAAt                                     <  1:858970/149‑1 (MQ=255)
                                                                                                                    tgatgaTTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGa                                   >  1:1340898/1‑149 (MQ=255)
                                                                                                                     gatgatTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAg                                  >  2:1048438/1‑149 (MQ=255)
                                                                                                                     gatgatTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAg                                  <  1:542142/149‑1 (MQ=255)
                                                                                                                         atTTTTATCAAATAATGACTATTTTCCTGAAAAGTCAGTAGATTTTGATAGGCAAGTAAGCTTTTATACTTTGCTGACAGGAATCAGGCCTGTATCAGACTGACATGCATGTACTGAACAAAAGGGAATGTCTATGGAAAATGAGCATc                              <  1:270033/149‑1 (MQ=255)
                                                                                                                         atTTTTATAAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTAGCTGACAGGATTCAGGCCTGTCTCAGACTGACAATGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATc                              <  1:219972/149‑1 (MQ=255)
                                                                                                                             ttATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATa                          <  1:809564/149‑1 (MQ=255)
                                                                                                                             ttATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATa                          <  1:376091/149‑1 (MQ=255)
                                                                                                                               aTCAAATCATGACTTTTTTCCTGaaaagtcatgatttgataaaaatcatcaaactcaaaaaaaaaccgctagtatattctgaatattccgaatagttacgtagatgaaaatacttgtcaacgctgctacttaattccggtgggaaatta                        <  1:937425‑M2/149‑127 (MQ=255)
                                                                                                                               aTCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACa                        <  2:314320/149‑1 (MQ=255)
                                                                                                                                  aaaTCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAgtg                     <  1:1485187/149‑1 (MQ=255)
                                                                                                                                  aaaTCATGACTTTTTTACTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTGAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGTAAAATGAGCATCAATACAgtg                     <  1:130789/149‑1 (MQ=255)
                                                                                                                                   aaTCATGACTTTTTTCCTGaaaagtcatgatttgataaaaatcatcaaactcaaaaaaaaaccgctagtatattctgaatattccgaatagtta                                                                           >  1:1567363‑M2/1‑19 (MQ=255)
                                                                                                                                   aaTCATGACTTTTTTCCTGaaaagtcatgatttgataaaaatcatcaaactcaaaaaaaaaccgctagtatattctgaatattccgaatagtta                                                                           <  2:1567363‑M2/94‑76 (MQ=255)
                                                                                                                                     tCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAgtggtg                  >  2:187954/1‑149 (MQ=255)
                                                                                                                                       aTGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGcc                >  2:641277/1‑149 (MQ=255)
                                                                                                                                         gACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCg              <  1:1268641/149‑1 (MQ=255)
                                                                                                                                         gACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCg              >  1:726681/1‑149 (MQ=255)
                                                                                                                                          aCTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCgg             >  1:635318/1‑149 (MQ=255)
                                                                                                                                            ttttttCCTGaaaagtcatgatttgataaaaatcatcaaactcaaaaaaaaaccgctagtatattctgaatattccgaatagttacgtagatgaaaa                                                               <  2:511227‑M2/97‑88 (MQ=255)
                                                                                                                                            ttttttCCTGaaaagtcatgatttgataaaaatcatcaaactcaaaaaaaaaccgctagtatattctgaatattccgaatagttacgtagatgaaaa                                                               >  1:511227‑M2/1‑10 (MQ=255)
                                                                                                                                            ttttttCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGgtg           <  1:1576669/149‑1 (MQ=255)
                                                                                                                                                 tCCTGAAAAGTCAGTAGATATTCATAGGAAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAg      <  1:930245/149‑1 (MQ=255)
                                                                                                                                                   cTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAggg    >  1:424626/1‑149 (MQ=255)
                                                                                                                                                   cTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAggg    <  1:1521793/149‑1 (MQ=255)
                                                                                                                                                   cTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAggg    >  1:998954/1‑149 (MQ=255)
                                                                                                                                                     gAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCa  >  1:1303554/1‑149 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
TTATGCGGAAATAAATAATTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTT‑‑‑GAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCA  >  NC_000913/4556662‑4556956

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.