| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,270,729 | C→A | 5.0% | intergenic (+269/+20) | rdlC → / ← chaA | sRNA antisense regulator affects LdrC translation; proposed addiction module in LDR‑C repeat, with toxic peptide LdrC/calcium/sodium:proton antiporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,270,729 | 0 | C | A | 5.0% | 402.5 / 7.6 | 119 | intergenic (+269/+20) | rdlC/chaA | sRNA antisense regulator affects LdrC translation; proposed addiction module in LDR‑C repeat, with toxic peptide LdrC/calcium/sodium:proton antiporter |
| Reads supporting (aligned to +/- strand): ref base C (51/62); new base A (3/3); total (54/65) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.72e-01 | |||||||||||
Only 100 of 121 total aligned reads displayed.
ATGAAGAGTACATTCCGGCTTTTCAACAGCTGTTGCAGTGGTTTCGTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATGGCACAGCACTAAAGAGGCCACCATCACCACCATTTC > NC_000913/1270581‑1270877 | gAAGAGTACATTCCGGCTTTTCAACAGCTGTTGCAGTGGTTTTGTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCAt < 2:729677/149‑1 (MQ=255) gAAGAGTACATTCCGGCTTTTCAACAGCTGTTGCAGTGGTTTCGTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCAt < 2:1161378/149‑1 (MQ=255) gagTACATTCCGGCTTTTCAACAGCTGTTGCAGTGGTTTCGTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCTCCGATGACGGTAATCgg > 2:264416/1‑149 (MQ=255) agTACATTCCGGCTTTTCAACAGCTGTTGCAGTGGTTTCGTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCgga < 2:40230/149‑1 (MQ=255) aCATTCCGGCTTTTCAACAGCTGTTGCAGTGGTTTCGTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCTCCGATGACGGTAATCggggga < 2:1452686/149‑1 (MQ=255) cATTCCGTCTTTTCAACAGCTGTTGCAGTGGTTTCGTGCAGGGTGTGTTACAGGATCGCAAATCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGgaggag < 1:314268/149‑1 (MQ=255) cATTCCGGCTTTTCAACAGCTGTTGCAGTGGTTTCGTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACTATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGgaggag < 1:1542728/149‑1 (MQ=255) aTTCCGGCTTTTCAACAGCTGTTGCAGTGGTTTCGTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGgaga < 1:533541/149‑1 (MQ=255) aTTCCGGCTTTTCAACAGCTGTTGCAGTGGTTTCGTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGgaga > 1:790554/1‑149 (MQ=255) aTTCCGGCTTTTCAACAGCTGTTGCAGTGGTTTCGTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGgaga < 1:539952/149‑1 (MQ=255) ttCCGGCTTTTCAACAGCTGTTGCAGTGGTTTCGTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGat > 1:946293/1‑149 (MQ=255) tCCGGCTTTTCAACAGCTGTTGCAGTGGTTTCGTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGata < 1:225516/149‑1 (MQ=255) ggCTTTTCAACAGCTGTTGCAGTGGTTTCGTTCATGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCATGTAGTATGAAGAAATACAATAAGAAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATaa < 2:1352182/149‑1 (MQ=255) ggCTTTTCAACAGCTGTTGCAGTGGTTTCGTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCTCCGATGACGGTAATCGGGGGAGataata < 1:264416/149‑4 (MQ=39) ggCTTTTCAACAGCTGTTGCAGTGGTTTCGTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATaa > 2:1209439/1‑149 (MQ=255) ggCTTTTCAACAGCTGTTGCAGTGGTTTCGTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATaa < 1:510758/149‑1 (MQ=255) ttttCAACAGCTGTTGCAGTGGTTTCGTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATAGGAGGAGATATAACTg > 1:1516317/1‑149 (MQ=255) ttGCAGTGGTTTCGTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATc > 2:577272/1‑149 (MQ=255) gCAGTGGTTTCGTGCAGGGTGTTGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGt < 1:1474271/149‑1 (MQ=255) gCAGTGGTTTCGTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGt < 2:1060056/149‑1 (MQ=255) gCAGTGGGTTCGTGCAGGGTGTGGGACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGt < 2:888926/149‑1 (MQ=255) cAGTGGTTTCGTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGtc > 1:1277003/1‑149 (MQ=255) tGGTTTCGTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGtcatc < 2:12412/149‑1 (MQ=255) tGGTTTCGTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGtcatc < 2:398879/149‑1 (MQ=255) gTTTCGTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCaa > 2:839773/1‑149 (MQ=255) tttCGTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGACATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCaaa > 1:394246/1‑149 (MQ=255) gTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAgg > 1:1087038/1‑149 (MQ=255) tGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAggc > 2:476775/1‑149 (MQ=255) tACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGc < 2:790554/149‑1 (MQ=255) tACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGc < 2:1277003/149‑1 (MQ=255) aCAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGcc > 2:176424/1‑149 (MQ=255) cAGGCTCTCAATTCTGATTAACGACCTCTCCAGGTTGTATGAAGTAATACAATACGCAGGAATTTATATAATCT‑CCCCCTATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGTCAAACAGTGCCa < 2:1160194/149‑1 (MQ=255) cTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAGTACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGAtg > 1:1227510/1‑149 (MQ=255) cTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGAtg < 1:1043993/149‑1 (MQ=255) tCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGAtgc > 1:1463703/1‑149 (MQ=255) cGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGAtgcg < 2:889283/149‑1 (MQ=255) gCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGgaggag > 2:217025/1‑92 (MQ=255) gCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGgaggag < 1:217025/92‑1 (MQ=255) aTTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCAtt > 2:1228263/1‑149 (MQ=255) ttAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTg > 1:629928/1‑149 (MQ=255) aCGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGc < 1:527022/149‑1 (MQ=255) aCCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACg > 2:1545968/1‑149 (MQ=255) ccTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGt < 2:545999/149‑1 (MQ=255) cTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGtt > 2:103512/1‑149 (MQ=255) cTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGtt > 2:690449/1‑149 (MQ=255) tGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTa < 1:413235/149‑1 (MQ=255) tGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTa < 1:1316689/149‑1 (MQ=255) tGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTCCCAGATGCGCTGCGCCATTGAGCACGTTa < 1:1052123/149‑1 (MQ=255) gTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAg < 2:171862/149‑1 (MQ=255) tCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGt > 1:253700/1‑149 (MQ=255) cAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATACCTGTCAGGCAAATATAGTCATCAAATAGGCGGCAAACAGTGCCAGAAGCGCTGCGCCATTAATCACGTTAGTAc > 1:1515601/1‑149 (MQ=255) aGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACg > 1:226855/1‑149 (MQ=255) ggTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGt > 2:342013/1‑149 (MQ=255) gtagtaTGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTc > 1:1117953/1‑149 (MQ=255) gtagaaTGAAGAAATACAATAAGCAGGAATAAATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATAAAACTGTCAGGCAAATAACGAGATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCAATTGATCAAGTTAGTAAGTc > 1:967801/1‑149 (MQ=255) gtaTGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCgg < 1:1545968/149‑1 (MQ=255) taTGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGt < 1:1266031/149‑1 (MQ=255) tGAAGAAATACAGTAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTgg > 1:1487551/1‑149 (MQ=255) gaagaaATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCTCTGCGCCATTGAGCACGTTAGTACGTCCGGTggt > 2:1436580/1‑148 (MQ=255) aagaaATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGgag > 2:751701/1‑149 (MQ=255) aagaaATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGgag > 2:1267153/1‑149 (MQ=255) gaaATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGaa < 2:1476389/149‑1 (MQ=255) aaTACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAgg < 2:879637/149‑1 (MQ=255) aTACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGga > 2:719368/1‑149 (MQ=255) cAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGat < 1:1481091/149‑1 (MQ=255) aaTAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGata > 1:181780/1‑149 (MQ=255) aaTAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGata > 1:593630/1‑149 (MQ=255) aTAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGatat < 1:581253/149‑1 (MQ=255) aTAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGatat < 1:1148116/149‑1 (MQ=255) aaGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATgg < 2:1516317/149‑1 (MQ=255) gCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGt > 2:852799/1‑118 (MQ=255) gCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATGGca > 1:687118/1‑149 (MQ=255) aGGAATTTATATTATCTCCCCCCGATTACCGTCATAGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATGGcac < 2:662290/149‑1 (MQ=255) aGGAATTTATATTATCT‑CCCCCGATGACCGTCATCGGAGGAGATATAACTGTAAGGAAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTTCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATGGcaca > 1:329052/1‑149 (MQ=255) ggAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATGGCACAg > 1:1489450/1‑149 (MQ=255) gAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATGGCACAGc > 2:1074180/1‑149 (MQ=255) aaTTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATGGCACAGCa < 2:475197/149‑1 (MQ=255) aTTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATGGCACAGCAc < 2:1487551/149‑1 (MQ=255) aTTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATGGCACAGCAc < 1:998638/149‑1 (MQ=255) tttATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATGGCACAGCACt > 2:1292114/1‑149 (MQ=255) atatTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATGGCACAGCACTaaa < 1:1368102/149‑1 (MQ=255) atatTATCT‑CCCCCGATTACCGTCATCGGAGGACATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATGGCACAGCACTaaa < 1:793575/149‑1 (MQ=255) ttatatCT‑CCTCCGATGACGGTAATCGGGGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATGGCACAGCACTAAag > 1:1473706/4‑149 (MQ=39) ttatatCT‑CCTCCGATGACGGTAATCGGGGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATGGCACAGCACTAAag > 2:794205/4‑149 (MQ=39) tattatCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATGGCACAGCACTAAag < 1:1209439/149‑1 (MQ=255) tattatCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATGGCACAGCACTAAag < 2:529658/149‑1 (MQ=255) attatCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATGGCACAGCACTAAaga < 1:476775/149‑1 (MQ=255) ttatCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATGGCACAGCACTAAagag < 2:698547/149‑1 (MQ=255) ttatCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATGGCACAGCACTAAagag < 2:1227510/149‑1 (MQ=255) ttatCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATGCCACAGCACTAAagag > 1:1096464/1‑149 (MQ=255) ttatCT‑CCCCCGATTACCGACATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATGGCACAGCACTAAagag < 2:394246/149‑1 (MQ=255) atCT‑CCTCCGATGACGGTAATCGGGGGAGATATAACTGTCAGGCAAATATCTTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATGGCACAGCACTAAAGAGGc < 1:794205/149‑1 (MQ=255) cccGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGTGCTGCGCAATTGATCACGTTAGTACGTCCGGTGGAGAAGGAGATATGGCACAGCACTAAAGAGGCAACAAt > 1:36897/1‑149 (MQ=255) cGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATGGCACAGCACTAAAGAGGCCACCATca > 1:922455/1‑149 (MQ=255) aTTACCGTCATCGGAGGAGATATAACTGTCAGTCAAATATCGTCATAAAAAACGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATGGCACAGCACTAAAGAGGCCACCATcacc < 1:244072/149‑1 (MQ=255) aTTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATGGCACAGCACTAAAGAGGCCACCATcacc < 1:751701/149‑1 (MQ=255) tACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATGGCACAGCACTAAAGAGGCCACCATcaccac < 2:1087038/149‑1 (MQ=255) ccGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATGGCACAGCACTAAAGAGGCCACCATCAccacca < 1:730388/149‑1 (MQ=255) cGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATGGCACAGCACTAAAGAGGCCACCATCACCACCAt > 2:908146/1‑149 (MQ=255) cATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATGGCACAGCACTAAAGAGGCCACCATCACCACCATTTc < 2:1560466/149‑1 (MQ=255) | ATGAAGAGTACATTCCGGCTTTTCAACAGCTGTTGCAGTGGTTTCGTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATGGCACAGCACTAAAGAGGCCACCATCACCACCATTTC > NC_000913/1270581‑1270877 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |