| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,804,528 | C→A | 9.4% | intergenic (+67/‑287) | nrdF → / → proV | ribonucleoside‑diphosphate reductase 2, beta subunit, ferritin‑like protein/glycine betaine/proline ABC transporter periplasmic binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,804,528 | 0 | C | A | 9.4% | 261.5 / 3.2 | 105 | intergenic (+67/‑287) | nrdF/proV | ribonucleoside‑diphosphate reductase 2, beta subunit, ferritin‑like protein/glycine betaine/proline ABC transporter periplasmic binding protein |
| Reads supporting (aligned to +/- strand): ref base C (55/37); new base A (2/8); total (57/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.07e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 107 total aligned reads displayed.
TCACGATTTCTTTTCCGGTTCAGGCTCCTCTTATGTGATGGGGAAAGCGGTTGAAACAGAAGATGAAGACTGGAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGAAACCACAATATTCAGGCGTTTTTTCGCTATCTTTGACAAAAAATATCAACTTTCTCGATTTGCTCTCAGCCCTTATATCACGGGAAATTCCGGC > NC_000913/2804380‑2804676 | tCACGATTTCTTTTCCGGTTCAGGCTCCTCTTATGTGATGGGGAAAGCGGTTGAAACAGAAGATGAAGACTGGAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATc < 2:1079965/149‑1 (MQ=255) aTTTCTTTTCCGGTTCAGGCTCCTCTTATGTGATGGGGAAAGCGGTTGAAACAGAAGATGAAGACTGGAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCACGCa > 1:1369155/1‑149 (MQ=255) tttCTTTTCCGGTTCAGGCTCCTCTTATGTGATGGGGAAAGCGGTTGAAACAGAAGATGAAGACTGGAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCACTCaa > 2:853815/1‑149 (MQ=255) ttttCCGGTTCAGGCTCCTCTTATGTGATGGGGAAAGCGGTTGAAACAGAAGATGAAGACTGGAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCACGCAaat‑a‑a > 1:342241/1‑149 (MQ=255) tttCCGGTTCAGGCTCCTCTTATGTGATGGGGAAAGCGGTTGAAACAGAAGATGAAGACTGGAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCACGCAaat‑a‑at < 1:1449222/149‑1 (MQ=255) tttCCGGTTCAGGCTCCTCTTATGTGATGGGGAAAGCGGTTGAAACAGAAGATGAAGACTGGAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCACGCAaat‑a‑at < 1:1428451/149‑1 (MQ=255) ttCCGGTTCAGGCTCCTCTTATGTGATGGGGAAAGCGGTTGAAACAGAAGATGAAGACTGGAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑Att < 2:169307/149‑1 (MQ=255) cGGTTCAGGCTCCTCTTATGTGATGGGGAAAGCGGTTGAAACAGAAGATGAAGACTGGAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTtgt < 1:1046509/149‑1 (MQ=255) tgTTCAGGCTCCTCTTATGTGATGGTGAAAGCGGTTGAAACAGAAGATGAAGACTGGAATTTCTGAGGGTGTTATATTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTtgtg < 1:1394863/148‑1 (MQ=255) gTTCAGGCTCCTCTTATGTAATGGGGAAAGCGGTTGAAACAGAAGATGAAGACTGGAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTgtgg < 1:1383709/149‑1 (MQ=255) aGGCTCCTCTTATGTGATGGGGAAAGCGGTTGAAACAGAAGATGAAGACTGGAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGAt < 1:1202521/149‑1 (MQ=255) aGGCTCCTCTTATGTGATGGGGAAAGCGGTTGAAACAGAAGATGAAGACTGGAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGAt < 1:959319/149‑1 (MQ=255) aGGCTCCTCTTATGTGATGGGGAAAGCGGTTGAAACAGAAGATGAAGACTGGAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGAt < 2:882103/149‑1 (MQ=255) aGGCTCCTCTTATGTGATGGGGAAAGCGGTTGAAACAGAAGATGAAGACTGGAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACACGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTATATCACGCAAAT‑A‑ATTAGTGGTGAt > 1:1043289/1‑149 (MQ=255) gCTCCTCTTATGTGATGGGGAAAGCGGTTGAAACAGAAGATGAAGACTGGAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCt < 1:1205315/149‑1 (MQ=255) tcctcTTATGTGATGGGGAAAGCGGTTGAAACAGAAGATGAAGACTGGAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGTTGATCTac > 1:1559530/1‑149 (MQ=255) tcctcTTATGTGATGGGGAAAGCGGTTGAAACAGAAGATGAAGACTGGAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTac > 1:1262929/1‑149 (MQ=255) ctctTATGTGATGGGGAAAGCGGTTGAAACAGAAGATGAAGACTGGAATTTCTGAGTGTGTTATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTacac < 1:798273/149‑1 (MQ=255) ctctTATGTGATGGGGAAAGCGGTTGAAACAGAAGATGAAGACTGGAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTacac < 1:1097213/149‑1 (MQ=255) tctTATGTGATGGGGAAAGCGGTTGAAACAGAAGATGAAGACTGGAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTACACt > 1:869195/1‑149 (MQ=255) ttATGTGATGGGGAAAGCGGTTGAAACAGAAGATGAAGACTGGAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGa > 1:1057297/1‑149 (MQ=255) tATGTGATGGGGAAAGCGGTTGAAACAGAAGATGAAGACTGGAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATAACGCAAAT‑A‑ATTTGTGGTGATCTACACTGAt > 2:224172/1‑149 (MQ=255) aTGTGTTGGGGAAAGCGGTTGAAACAGAAGATGAAGACTGGAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACCCGCAGCAGTGAAATAATTCCCGCCAAATAGCTTTTTATCCCGCAAAT‑A‑ATTTGTGGTGATCTACACTGATa < 1:886109/149‑1 (MQ=255) gtgATGGGGAAAGCGGTTGAAACAGAAGATGAAGACTGGAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCTCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATAct > 2:557280/1‑149 (MQ=255) gtgATGGGGAAAGCGGTTGAAACAGAAGATGAAGACTGGAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCAGCC‑AATTTTTTTTTTTTATGTTAATGA‑TTTTTTTGTGATCTACACTGATAct < 2:150965/149‑1 (MQ=255) gATGGGGAAAGCGGTTGAAACAGAAGATGAAGACTGGAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATActct > 2:1507647/1‑149 (MQ=255) gATGGGGAAAGCGGTTGAAACAGAAGATGAAGACTGGAATTACTGAGAGTGATATTTTAAAAAATATCACAACCCGCAGCAGGCAAAAAATAACAGCAAAATAGCATTTTATAAAGCAAAT‑A‑AATTGAGTTGATCTACACTGATActct > 1:1014374/1‑149 (MQ=255) aTGGGGAAAGCGGTTGAAACAGAAGATGAAGACTGGAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATActctt > 2:165968/1‑148 (MQ=255) aTGGGGAAAGCGGTTGAAACAGAAGATGAAGACTGGAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTCTg > 2:903161/1‑149 (MQ=255) aTGGGGAAAGCGGTTGAAACAGAAGATGAAGACTGGAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTCTg < 1:500244/149‑1 (MQ=255) ggggAAAGCTGTTGAAACAGAAGATGAAGACTGGAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACCCGCAGCAGTGAAATAATTCCCGCCAAATAGCTTTTAATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTCTGtt < 1:1291421/149‑1 (MQ=255) ggggAAAGCGGTTGAAACAGAAGATGAAGACTGGAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTCTGtt < 1:1545483/149‑1 (MQ=255) gtgAAAGCGGTTGAAACAGAAGATGAAGACTGGAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTCTGTTg > 2:1036676/3‑149 (MQ=255) gggAAAGCGGTTGAAACAGAATATGAAGTCTGGAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCACTCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTCTGTTg < 1:1393719/149‑1 (MQ=255) ggAAAGCGGTTGAAACAGAAGATGAAGACTGGAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCAAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATATACACTGATACTCTGTTga > 1:665366/1‑148 (MQ=255) ggAAAGCGGTTGAAACAGAAGATGAAGACTGGAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACACGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTCTGTTGc > 1:1315530/1‑149 (MQ=255) gAAAGCGGTTGAAACAGAAGATGAAGACTGGAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTCTGTTGCa < 1:1229979/149‑1 (MQ=255) gAAAGCGGTTGAAACAGAAGATGAAGACTGGAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTCTGTTGCa > 1:1462740/1‑149 (MQ=255) ggTTGAAACAGAAGATGAAGACTGGAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTCTGTTGCattatta > 2:1220100/1‑148 (MQ=255) aaCAGAAGATGAAGACTGGAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGa > 2:742748/1‑149 (MQ=255) aaCAGAAGATGAAGACTGGAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCAGCCAAATAGCTTTTAAACACGCAAAA‑A‑ATATGTGGTGAACTACACTGATACTATTTTGCATAATTAGCATGa > 1:283623/1‑149 (MQ=255) ctgacgaTGAAGACTGGAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACCCGCATCATTGAAATAATTCCCGTCAAAT‑TTTTTTTTTTATGTTAATGAGATTTG‑GGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGaaa < 2:258802/144‑1 (MQ=255) cAGAAGATGAAGACTGGAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCCAAATTTTTTTTTTTATGTTAATT‑A‑TTTTTTGGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGaaa < 2:1305666/149‑1 (MQ=255) cAGAAGATGAAGACTGGAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGaaa > 2:138029/1‑149 (MQ=255) agaagaTGAAGACTGGAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGAAAc > 2:1369776/1‑149 (MQ=255) gaagaTGAAGACTGGAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGAAAcc > 2:516624/1‑149 (MQ=255) aTGAAGACTGGAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGAAACCACaa < 1:464857/149‑1 (MQ=255) taaGACTTGAATTTCTGAGTGTGTTATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGACAAATATTTTTTTTTATGTTAATT‑A‑TTTTTTGGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGAAACCACAata < 2:1303940/148‑1 (MQ=255) gAAGACTGGAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGAAACCACAata < 1:742748/149‑1 (MQ=255) gAAGACTGGAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGAAACCACAata > 1:814808/1‑149 (MQ=255) tGGAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCACGCATAT‑A‑ATTTGTGGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGAAACCACAATATTCAgg > 1:97592/1‑149 (MQ=255) tGGAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGAAACCACAATATTCAgg > 1:1422506/1‑149 (MQ=255) tGGAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGAAACCACAATATTCAgg > 2:1307107/1‑149 (MQ=255) tGGAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGAAACCACAATATTCAgg > 1:741561/1‑149 (MQ=255) ggAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGAAACCACAATATTCAGGc > 1:156172/1‑149 (MQ=255) gAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTCTGTTTCATTATTCGCCTGAAACCACAAAATTCATGCg > 2:149260/1‑149 (MQ=255) gAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGAAACCACAATATTCAGGCg > 1:1480472/1‑149 (MQ=255) gAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTCAGTTGCATTATTCGCCTGAAACAACAATATTCAGGCg > 2:59248/1‑149 (MQ=255) gAATTTCTGAGGGTGTTATATTCAAAAATATCACTACCAGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCAACACTCATACTCTGTAGCATTATTCGCCTGAAACCACAAAATTCAGGCg > 1:1075334/1‑149 (MQ=255) tttCTGAGGGTGTTATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGAAAACACAATATTCAGGCGttt > 2:775580/1‑149 (MQ=255) tttATGAGTGTTTGATTTTCAACTATATCACTAACAGCATCATTGAAATAAATCCAGCCAAATAGATTTTTATCACGCAAAT‑A‑ATTTGTTGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGAAACCACAATATTAAGGCGttt < 1:794852/149‑1 (MQ=255) gAGGGTGTTATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCTCGCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGAAACCACAATATTCAGGCGTTTTTTCg < 2:1246085/149‑1 (MQ=255) ggTGTTATTTTCAAAAATATCACTACCCGCAGCAGGAAAATAATTCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGAAACCACAATATTCAGGCGTTTTTTCGCTa > 1:948930/1‑149 (MQ=255) ttATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGAAACCACAATATTCAGGCGTTTTTTCGCTATCtt > 2:679259/1‑149 (MQ=255) ttCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCCAAATATATTTTTATCTCTTAATT‑A‑TTTTTTGGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGAAACCACAATATTCAGGCGTTTTTTCGCTATCTTTGACa < 2:1267001/149‑1 (MQ=255) ttCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGAAACCACAATATTCAGGCGTTTTTTCGCTATCTTTGACa > 2:704144/1‑149 (MQ=255) ttCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTCATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGAAACCACAATATTCAGGCGTTTTTTCGCTATCTTTGACa > 2:1519925/1‑149 (MQ=255) cACTACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGAAACCACAATATTCAGGCGTTTTTTCGCTATCTTTGACAAAAAATATCaa > 1:484800/1‑149 (MQ=255) aCTACCCGCAGCAGTGAAATAATTCCCGACAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGAAACCACAATATTCAGTCGTATTTTCGCTATCTTTGACAAAAAATATCAAc > 2:1243609/1‑149 (MQ=255) tACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGAAACCACAATATTCAGGCGTTTTTTCGCTATCTTTGACAAAAAatat > 2:1407579/1‑143 (MQ=255) tACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGAAACCACAATATTCAGGCGTTTTTTCGCTATCTTTGACAAAAAatat < 1:1407579/143‑1 (MQ=255) aCCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGAAACCACAATATTCAGGCGTTTTTTCGCTATCTTTGACAAAAAATATCAACttt < 1:516624/149‑1 (MQ=255) agGGAAATAATTCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGAAACCACAATATTCAGGCGTTTTTTCGCTATCttt < 1:177331/121‑1 (MQ=255) agGGAAATAATTCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGAAACCACAATATTCAGGCGTTTTTTCGCTATCttt > 2:177331/1‑121 (MQ=255) agGGAAATAATTACCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTATGTTGCATTATTCGCCTGAAACCACAATATTCAGGCGTTTTTTCTATATATTTTACAAAAAATATCAAATTTCTCGAtttt > 2:408398/1‑148 (MQ=255) ggAAATAATTCCCGCCAAATTTTTTTTTTTATGTTAATT‑A‑TTTTTTTGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGAAACCACAATATTCAGGCGTTTTTTCGCTATCTTTGACAAAAAATATCAACTTTCTGGATTTGct < 2:661365/149‑1 (MQ=255) ggAAATAATTCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGAAACCACAATATTCAGGCGTTTTTTCGCTATCTTTGACAAAAAATATCAACTTTCTCGATTTGct > 2:877433/1‑149 (MQ=255) gAAATAATTCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGAAACCACAATATTCAGGCGTTTTTTCGCTATCTTTGACAAAAAATATCAACTTTCTCGATTTActc > 2:401401/1‑149 (MQ=255) aaaTAATTCCCGCCAATTTTTTTTTTTTAAGTAATTT‑A‑TTTTGTTGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGAAACCACAATATTCAGGGGTTTTTTCGCTATCTTTGACAAAAAATATCAACTTTCTCGATTTGctct < 2:1075334/149‑1 (MQ=255) aaaTAATTCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGAAACCACAATATTCAGGCGTTTTTTCGCTATCTTTGACAAAAAATATCAACTTTCTCGATTTGctct < 1:1117104/149‑1 (MQ=255) aataatTCCCGCAAATTAGTTTTTTATCACGCAAAT‑A‑ATTTTTGGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGAAACCACAATATTCAGGCGTTTTTTCGCTATCTTTGACAAAAAATATCAACTTTCTCGATTTGCtctc < 2:283623/149‑1 (MQ=255) atTCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGAAACCACAATATTCAGGCGTTTTTTCGCTATCTTTGACAAAAAATATCAACTTTCTCGATTTGCTCTCAGcc < 1:165968/149‑1 (MQ=255) ttCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGAAACCACAATATTCAGGCGTTTTTTCGCTATCTTTGACAAAAAATATCAACTTTCTCGATTTGCTCTCAGccc > 1:353663/1‑149 (MQ=255) tCCCGCCAAATAGATTTTTTTATGTTAATT‑A‑TTTTTTGGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGAAACCACAATATTCAGGCGTTTTTTCGCTATCTTTGACAAAAAATATCAACTTTCTCGATTTGCTCTCAGCCCt < 2:736455/149‑1 (MQ=255) ccGCCAAATAGCTTTTTATCAAGCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGAAACCACAATATTCAGGCGTTTTTTCGCTATCTTTGACAAAAAATATCAACTTTCTCGATTTGCTCTCAGCCCTta < 1:927083/149‑1 (MQ=255) cGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGAAACCACAATATTCAGGCGTTTTTTCGCTATCTTTGACAAAAAATATCAACTTTCTCGATTTGCTCTCAGCCCTtat > 2:1401982/1‑149 (MQ=255) ccAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGAAACCACAATATTCAGGCGTTTTTTCGCTATCTTTGACAAAAAATATCAACTTTCTCGATTTGCTCTCAGCCCTTatat > 2:1051340/1‑149 (MQ=255) ccAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGAAACCACAATATTCAGGCGTTTTTTCGCTATCTTTGACAAAAAATATCAACTTTCTCGATTTGCTCTCAGCCCTTatat > 2:1482228/1‑149 (MQ=255) ccAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGAAACCACAATATTCAGGCGTTTTTTCGCTATCTTTGACAAAAAATATCAACTTTCTCGATTTGCTCCCAGCCCTTatat > 1:385952/1‑149 (MQ=255) aaTAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGTTACTCTGTTGCATTATTCGCCTGAAACCACAATATTCAGGCGTTTTTTCGCTATCTTTGACAAAAAATATCAACTTTCTCGATTTGCTCTCAGCCCTTATATCAc > 2:237883/1‑149 (MQ=255) aaTAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGAAACCACAATATTCAGGCGTTTTTTCGCTATCTTTGACAAAAAATATCAACTTTCTCGATTTGCtctc > 1:450491/1‑135 (MQ=255) aaTAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGAAACCACAATATTCAGGCGTTTTTTCGCTATCTTTGACAAAAAATATCAACTTTCTCGATTTGCtctc < 2:450491/135‑1 (MQ=255) attgCTTTTTATAAGGTAAAT‑A‑TTTTTTGGTTATCTACACTGATACTCTGTTGCATTATTCGCCTGAAACCACAATATTCAGGCGTTTTTTCGCTATCTTTGACAAAAAATATCAACTTTCTCGATTTGCTCTCAGCCCTTATATCACg < 2:1315530/146‑1 (MQ=255) atatCTTTTTATAAAGCAAAT‑A‑ATTTGTGGTTATCTACACTGATACTCTGTTGCATTATTCGCCTGAAACCACATTATTCACGCGTTTTTTCGCTATCTTTGACAAATAATATCATCTTTCTCTATTTGCTCTCAGCCCTTATATCTCg < 1:470570/149‑1 (MQ=255) aTAGCTTTTTATCACGCAAAT‑A‑TTTTGTGGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGAAACCACAATATTCAGGCGTTTTTTCGCTATCTTTGACAAAAAATATCAACTTTCTCGATTTGCTCTCAGCCCTTATATCACg < 2:1262929/149‑1 (MQ=255) aTAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGAAACCACAATATTCAGGCGTTTTTTCGCTATCTTTGACAAAAAATATCAACTTTCTCGATTTGCTCTCAGCCCTTATATCACg < 1:1369776/149‑1 (MQ=255) tttttATCAGTCAATT‑A‑ATTTTTGGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGAAACCACAATATTCAGGCGTTTTTTCGCTATCTTTGACAAAAAATATCAACTTTCTCGATTTGCTCTCAGCCCTTATATCACGGGaaa < 2:869195/149‑1 (MQ=255) tATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGAAACCACAATATTCAGGCGATTTTTCGCTATCTATGACAAAAAATATCAACTTTCTCGATTTGCTCTCAGCCCTTATATCACGGGAAATTcc > 1:239661/1‑149 (MQ=255) aTCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGAAACCACAATATTCAGGCGTTTTTTCGCTATCTTTGACAAAAAATATCAACTTTCTCGATTTGCTCTCAGCCCTTATATCACGGGAAATTCCg > 1:572390/1‑149 (MQ=255) cACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTCTGTTGCATTATTCGCATGAAACCACAATATTCAGGCGTTTTTTCGCTATCTTTGACAAAAAATATCAACTTTCTCGATTTGCTCTCAGCCCTTATATCACGGGAAATTCCGGc < 1:319213/149‑1 (MQ=255) | TCACGATTTCTTTTCCGGTTCAGGCTCCTCTTATGTGATGGGGAAAGCGGTTGAAACAGAAGATGAAGACTGGAATTTCTGAGGGTGTTATTTTCAAAAATATCACTACCCGCAGCAGGGAAATAATTCCCGCCAAATAGCTTTTTATCACGCAAAT‑A‑ATTTGTGGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGAAACCACAATATTCAGGCGTTTTTTCGCTATCTTTGACAAAAAATATCAACTTTCTCGATTTGCTCTCAGCCCTTATATCACGGGAAATTCCGGC > NC_000913/2804380‑2804676 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |