| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,033,624 | A→G | 5.2% | intergenic (+11/+33) | idi → / ← lysS | isopentenyl diphosphate isomerase/lysine tRNA synthetase, constitutive |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,033,624 | 0 | A | G | 5.2% | 355.9 / 6.7 | 116 | intergenic (+11/+33) | idi/lysS | isopentenyl diphosphate isomerase/lysine tRNA synthetase, constitutive |
| Reads supporting (aligned to +/- strand): ref base A (53/55); new base G (4/2); total (59/57) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.79e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.97e-01 | |||||||||||
Only 100 of 117 total aligned reads displayed.
GATTATCAATGGTGTGATTTAGCAGATGTATTACACGGTATTGATGCCACGCCGTGGGCGTTCAGTCCGTGGATGGTGATGCAGGCGACAAATCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCGGGAACAGAATAACGTCGCGGATGGTATGGCTGTTGGTGAACAGCATTACCATACGGTCGATACCAATTCCCAGACCTGCTGTCGGCGGTAAG > NC_000913/3033476‑3033771 | gATTATCAATGGTGTGATTTAGCAGATGTATTACACGGTATTGATGCCACGCCGTGGGCGTTCAGTACGTGGATGGTGATGCAGGCGACAAATCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGa < 2:1532424/149‑1 (MQ=255) aTTATCAATGGTGTGATTTAGCAGATGTATTACACGGTATTGATGCCACGCCGTGGGCGTTCAGTCCGTGGATGGTGATGCAGGCGACAAATCGCTAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGAc > 1:1424437/1‑149 (MQ=255) aTTATCAATGGTGTGATTTAGCAGATGTATTACACGGTATTGATGCCACGCCGTGGGCGTTCAGTCCGTGGATGGTGATGCAGGCGACAAATCGCGAAGCCAGATAACGAGTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGAc > 1:1057535/1‑149 (MQ=255) aTTATCAATGGTGTGATTTAGCAGATGTATTACACGGTATTGATGCCACGCCGTGGGCGTTCAGTCCGTGGATGGTGATGCAGGCGACAAATCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGAc > 1:483727/1‑149 (MQ=255) ttATCAATGGTGTGATTTAGCAGATGTATTACACGGTATTGATGCCACGCCGTGGGCGTTCAGTCCGTGGATGGTGATGCAGGCGACAAATCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACa > 2:522900/1‑149 (MQ=255) ttATCAATGGTGTGATTTAGCAGATGTATTACAAGGTATTGATGCCACGCCGTGGGCGTTCAGTCCGTGGATGGTGATGCAGGCGACAAATCGCGAAGCCAGAAAACGTTTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACa < 2:1216363/149‑1 (MQ=255) tCAATGGTGTGATTTAGCAGATGTATTACACGGTATTGATGCCACGCCGTGGGCGTTCAGTCCGTGGATGGTGATGCAGGCGACAAATCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGGCaaat > 2:214668/1‑146 (MQ=255) tCAATGGTGTGATTTAGCAGATGTATTACACGGTATTGATGCCACGCCGTGGGCGTTCAGTCCGTGGATGGTGATGCAGGCGACAAATCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACAttt < 2:1460728/149‑1 (MQ=255) aTGGTGTGATTTAGCAGATGTATTACACGGTATTGATGCCACGCCGTGGGCGTTCAGTCCGTGGATGGTGATGCAGGCGACAAATCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGcc > 2:516781/1‑149 (MQ=255) gtgtGATTTAGCAGATGTATTACACGGTATTGATGCCACGCCGTGGGCGTTCAGTCCGTGGATGGTGATGCAGGCGACAAATCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCggg > 1:341682/1‑149 (MQ=255) tgATTTAGCAGATGTATTACACGGTATTGATGCCACGCCGTGGGCGTTCAGTCCGTGGATGGTGATGCAGGCGACAAATCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGtt > 2:893668/1‑149 (MQ=255) tttAGCAGATGTATTACACGGTATTGATGCCACGCCGTGGGCGTTCAGTCCGTGGATGGTGATGCAGGCGACAAATCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTtgtg > 1:483123/1‑149 (MQ=255) ttAGCAGATGTATTACACGGTATTGATGCCACGCCGTGGGCGTTCAGTCCGTGGATGGTGATGCAGGCGACAAATCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGGCAAATGTCGGGGtttttt < 1:214668/149‑5 (MQ=255) ttAGCAGATGTATTACACGGTATTGATGCCACGCCGTGGGCGTTCAGTCCGTGGATGGTGATGCAGGCGACAAATCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGa < 2:841266/149‑1 (MQ=255) gCAGATGTATTACACGGTATTGATGCCACGCCGTGGGCGTTCAGTCCGTGGATGGTGATGCAGGCGACAAATCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGGCAAATGTCGGGGtttttttat < 2:1304760/149‑8 (MQ=255) cAGATGTATTACACGGTATTGATGCCACGCCGTGGGCGTTCAGTCCGTGGATGGTGATGCAGGCGACAAATCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCAt > 2:482519/1‑149 (MQ=255) gATGTATTACACGGTATTGATGCCACGCCGTGGGCGTTCAGTCCGTGGATGGTGATGCAGGCGACAAATCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATaa > 1:10962/1‑149 (MQ=255) aTGTATTACACGGTATTGATGCCACGCCGTGGGCGTTCAGTCCGTGGATGGTGATGCAGGCGACAAATCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGCCATTTGCCGGGGTGGTGGGCATAAc > 2:1515902/1‑149 (MQ=255) tATTACACGGTATTGATGCCACGCCGTGGGCGTTCAGTCCGTGGATGGTGATGCAGGCGACAAATCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTa > 2:912357/1‑149 (MQ=255) aTTACACGGTATTGATGCAACGCCGTGGGCGTTCAGTCCGTGGATGGTGATGCAGGCGACAAATCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTaa > 1:766037/1‑149 (MQ=255) tACACGGTATTGATGCCACGCCGTGGGCGTTCAGTCCGTGGATGGTGATGCAGGCGACAAATCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATg < 1:60541/149‑1 (MQ=255) tACACGGTATTGATGCCACGCCGTGGGCGTTCAGTCCGTGGATGGTGATGCAGGCGACAAATCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATg < 2:589916/149‑1 (MQ=255) acGGTATTGATGCCACGCCGTGGGCGTTCAGTCCGTGGATGGTGATGCAGGCGACAAATCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCtt > 2:1038749/1‑149 (MQ=255) gTATTGATGCCACGCCGTGGGCGTTCAGTCCGTGGATGGTGATGCAGGCGACAAATCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGCCATTTGCCGGGGTTGTGAGCAGAACGTAATGCTTAtt > 2:288047/1‑149 (MQ=255) gTATTGATGCCACGCCGTGGGCGTTCAGTCCGTGGATGGTGATGCAGGCGACAAATCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTAtt < 1:287926/149‑1 (MQ=255) gTATTGATGCCACGCCGTGGGCGTTCAGTCCGTGGATGGTGATGCAGGCGACAAATCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTAtt < 2:901068/149‑1 (MQ=255) ttGATGCCACGCCGTGGGCGTTCAGTCCGTGGATGGTGATGCAGGCGACAAATCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTa < 1:1226485/149‑1 (MQ=255) aTGCCACGCCGTGGGCGTTCAGTCCGTGGATGGTGATGCAGGCGACAAATCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGATTATTTTACCg > 1:290375/1‑149 (MQ=255) tGCCACGCCGTGGGCGTTCAGTCCGTGGATGGTGATGCAGGCGACAAATCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACg < 2:325076/131‑1 (MQ=255) tGCCACGCCGTGGGCGTTCAGTCCGTGGATGGTGATGCAGGCGACAAATCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACg > 1:325076/1‑131 (MQ=255) tGCCACGCCGTGGGCGTTCAGTCCGTGGATGGTGATGCAGGCGACAAATCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCgg > 2:443265/1‑149 (MQ=255) gCCACGCCGTGGGCGTTCAGTCCGTGGATGGTGATGCAGGCGACAAATCGCGAAGCCAGAAAACGATTATCTTCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGa < 2:939879/149‑1 (MQ=255) ccACGCCGTGGGCGTTCAGTCCGTGGATGGTGATGCAGGCGACAAATCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGAc > 1:1392582/1‑149 (MQ=255) ccACGCCGTGGGCGTTCAGTACGTGGATGGTGATGCAGGCGACAAATCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGTGGTTGTGAGCATAACGTAATGCTTATTTTACCGGAc < 1:102957/149‑1 (MQ=255) aCGCCGTGGGCGTTCAGTCCGTGGATGGTGATGCAGGCGACAAATCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAATCCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGc > 2:767017/1‑149 (MQ=255) aCGCCGTGGGCGTTCAGTCCGTGGATGGTGATGCAGGCGACAAATCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGc > 2:508936/1‑149 (MQ=255) aCGCCGTGGGCGTTCAGTCCGTGGATGGTGATGCAGGCGACAAATCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGc > 1:999936/1‑149 (MQ=255) gCCGTGGGCGTTCAGTACGTGGATGGTGATGCAGGCGACAAATCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCAt < 2:1199508/149‑1 (MQ=255) cGTGGGCGTTCAGTCCGTGGATGGTGATGCAGGCGACAAATCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAATAAAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATc < 2:954615/149‑1 (MQ=255) cGTGGGCGTTCAGTCCGTGGATGGTGATGCAGGCGACAAATCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCg > 1:336754/1‑149 (MQ=255) gggCGTTCAGTCCGTGGATGGTGATGCAGGCGACAAATCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCg < 2:23323/149‑1 (MQ=255) ggCGTTCAGTCCGTGGATGGTGATGCAGGCGACAAATCGTGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCgg > 2:1474035/1‑149 (MQ=255) ggCGTTCAGTCCGTGGATGGTGATGCAGGCGACAAATCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCgg < 1:949755/149‑1 (MQ=255) gCGTTCAGTCCGTGGATGGTTATGCAGGCGACAAATCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCggg < 2:288009/149‑1 (MQ=255) cGTTCAGTCCGTGGATGGTGATGCAGGCGACAAATCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCGGGa > 1:1221754/1‑149 (MQ=255) cAGTCCGTGGATGGTGATGCAGGCGACAAATCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCGGGAACAg < 1:334077/149‑1 (MQ=255) cGTGGATGGTGATGCAGGCGACAAATCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCGGGAACAGAATaa > 1:1414331/1‑149 (MQ=255) tGGATGGTGATGCAGGCGACAAATCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCGGGAACAGAATAACg < 2:502437/149‑1 (MQ=255) tGGTGATGCAGGCGACAAATCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCGGGAACAGAATAACGTcgc < 2:1528774/149‑1 (MQ=255) atgcatgcGACAAATCGCGAAGGCAGAAATCGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATATGCCGGGGTTGTGAGCATAACGTAATGCTTAATTTACCGGACGCATCGCCGGGAACAGAATAACGTCGCGGATg < 2:28865/149‑1 (MQ=255) aTGCAGGCGACAAATCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCGGGAACAGAATAACGTCGCGGATg < 2:553225/149‑1 (MQ=255) aTGCAGGCGACAAATCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCGGGAACAGAATAACGTCGCGGATg > 2:357313/1‑149 (MQ=255) tGCAGGCGACAAATCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCGGGAACAGAATAACGTCGCGGATgg < 2:521178/149‑1 (MQ=255) gCAGGCGACAAATCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCGGGAACAGAATAACGTCGCGGATGGt < 1:220270/149‑1 (MQ=255) aaaTCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCGGGAACAGAATAACGTCGCGGATGGTATGGCTGtt > 1:1349600/1‑149 (MQ=255) aaaTCGCGAAGCCAGAAAACGATTATCTGCATTTACACAGCTTAAAT‑AAAAAAACCCCGACATTTGACGGGGTTGTGAGCATAACGTAATGCTTATTTTAACGGACGCATCGCCGGGAACAGAATAACGTCGCGGATGGTATGGCTGtt > 2:735570/1‑149 (MQ=255) aTCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCGGGAACAGAATAACGTCGCGGATGGTATGGCTGTTgg < 2:838905/149‑1 (MQ=255) aTCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCGGGAACAGAATAACGTCGCGGATGGTATGGCTGTTgg > 1:849394/1‑149 (MQ=255) aTCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCGGGAACAGAATAACGTCGCGGATGGTATGGCTGTTgg > 1:1043644/1‑149 (MQ=255) aTCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCGGGAACAGAATAACGTCGCGGATGGTATGGCTGTTgg < 2:864982/149‑1 (MQ=255) tCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCGGGAACAGAATAACGTCGCGGATGGTATGGCTGTTGGt > 1:676735/1‑149 (MQ=255) cgAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCGGGAACAGAATAACGTCGCGGATGGTATGGCTGTTGGTGaa > 2:403314/1‑149 (MQ=255) cgAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGAAGCATCGCCGGGAACAGAATAACGTCGCGGATGGTATGGCTGTTGGTGaa > 2:1251916/1‑149 (MQ=255) gAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCGGGAACAGAATAACGTCGCGGATGGTATGGCTGTTGGTGAAc < 2:1392582/149‑1 (MQ=255) gCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCGGGAACAGAATAACGTCGCGGATGGTATGGCTGTTGGTGAACAGc < 1:334947/149‑1 (MQ=255) ccAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCGGGAACAGAATAACGTCGCGGATGGTATGGCTGTTGGTGAACAGCa > 2:1443724/1‑149 (MQ=255) cAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCGGGAACAGAATAACGTCGCGGATGGTATGGCTGTTGGTGAACAGCAt > 1:585005/1‑149 (MQ=255) aGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCGGGAACAGAAAAACGTCGCGGATGGTATGGCTGTTGGTGAACAGCAtt > 1:7929/1‑149 (MQ=255) gAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCGGGAACAGAATAACGTCGCGGATGGTATGGCTGTTGGTGAACAGCATTa < 1:508936/149‑1 (MQ=255) aaaaCGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCGGGAACAGAATAACGTCGCGGATGGTATGGCTGTTGGTGAACAGCATTAc > 2:1341558/1‑149 (MQ=255) aaaaCGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCGGGAACAGAATAACGTCGCGGATGGTATGGCTGTTGGTGAACAGCATTAc > 2:1366590/1‑149 (MQ=255) aaaaCGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCGGGAACAGAATAACGTCGCGGATGGTATGGCTGTTGGTGAACAGCATTAc > 1:1249487/1‑149 (MQ=255) aaaCGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCGGGAACAGAATAACGTCGCGGATGGTATGGCTGTTGGTGAACAGCATTAcc < 1:929972/149‑1 (MQ=255) aCGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCGGGAACAGAATAACGTCGCGGATGGTATGGCTGTTGGTGAACAGCATTACCAt < 1:1128870/149‑1 (MQ=255) aCGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCGGGAACAGAATAACGTCGCGGATGGTAATGCTGTTCACCAACAGCCATACCAt < 1:1527488/149‑1 (MQ=255) ttATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCGGGAACAGAATAACGTCGCGGATGGTATGGCTGTTGGTGAACAGCATTACCATACgg > 1:1149905/1‑149 (MQ=255) tATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCGGGAACAGAATAACGTCGCGGATGGTATGGCTGTTGGTGAACAGCATTACCATACGGt < 1:984662/149‑1 (MQ=255) tCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCGGGAACAGAATAACGTCGCGGATGGTATGGCTGTTGGTGAACAGCATTACCATACGGTCg > 1:695552/1‑149 (MQ=255) cTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCGGGAACAGAATAACGTCGCGGATGGTATGGCTGTTGGTGAACAGCATTACCATACGGTCGa < 1:912357/149‑1 (MQ=255) tGCATTTACCCAGCTTCAAT‑AAAAACACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCGGGAACAGAATAACGTCGCGGATGGTATGGCAGGTGGTGAACAGCATTACCATACGGTCGAt < 1:329069/149‑1 (MQ=255) cATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCGGGAACAGAATAACGTCGCGGATGGTATGGCTGTTGGTGAACAGCATTACCATACGGTCGATAc > 2:1016476/1‑149 (MQ=255) tttACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCGGGAACAGAATAACGTCGCGGATGGTATGGCTGTTGGTGAACAGCATTACCATACGGTCGATACCa > 2:1528718/1‑149 (MQ=255) tACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCGGGAACAGAATAACGTCGCGGATGGTATGGCTGTTGGTGAACAGCATTACCATACGGTCGATACCAAt > 2:462517/1‑149 (MQ=255) aCCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCGGGAACAGAATAACGTCGCGGATGGTATGGCTGTTGGTGAACAGCATTACCATACGGTCGATACCAAtt > 2:491693/1‑149 (MQ=255) acAGCTTAAAT‑AAAAAGACCCCGACATTTGCCGGGGGTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCGGGAACAGAATAACGTCGCGGATGGTATGGCTGTTGGTGAACAGCATTACCATACGGTCGATACCAATTcc < 2:1131823/148‑1 (MQ=255) cTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCGGGAACAGAATAACGTCGCGGATGGTATGGCTGTTGGTGAACAGCATTACCATACGGTCGATACCAATTCCCAGa < 1:522900/149‑1 (MQ=255) aaat‑aaaAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCGGGAACAGAATAACGTCGCGGATGGTATGGCTGTTGGTGAACAGCATTACCATACGGTCGATACCAATTCCCAGACct < 2:695412/149‑1 (MQ=255) t‑aaaAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCGGGAACAGAATAACGTCGCGGATGGTATGGCTGTTGGTGAACAGCATTACCATACGGTCGATAc < 2:1193895/132‑1 (MQ=255) t‑aaaAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCGGGAACAGAATAACGTCGCGGATGGTATGGCTGTTGGTGAACAGCATTACCATACGGTCGATAc > 1:1193895/1‑132 (MQ=255) tcacaaCCCCGGCAAATGTCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCGGGAACAGAATAACGTCGCGGATGGTATGGCTGTTGGTGAACAGCATTACCATACGGTCGATACCAATTCCCAGACCTGCTGt > 1:178336/5‑149 (MQ=255) tcacaaCCCCGGCAAATGTCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCAACGCCGGGAACAGAATAACGTCGCGGATGGTATGGCTGTTGGTGAACAGCATTACCATACGGTCGATACCAATTCCCAGACCTGCTGt > 1:940528/5‑149 (MQ=255) aaaaaaCCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCGGGAACAGAATAACGTCGCGGATGGTATGGCTGTTGGTGAACAGCATTACCATACGGTCGATACCAATTCCCa > 2:1007560/1‑139 (MQ=255) aaaaaaCCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCGGGAACAGAATAACGTCGCGGATGGTATGGCTGTTGGTGAACAGCATTACCATACGGTCGATACCAATTCCCa < 1:1007560/139‑1 (MQ=255) caaCCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCGGGAACAGAATAACGTCGCGGATGGTATGGCTGTTGGTGAACAGCATTACCATACGGTCGATACCAATTCCCAGACCTGCTGTcgg < 1:1191494/148‑1 (MQ=255) aCCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCGGGAACAGAATAACGTCGCGGATGGTATGGCTGTTGGTGAACAGCATTACCATACGGTCGATACCAATTCCCAGACCTGCTGTcggcg < 1:1455823/149‑1 (MQ=255) gACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCGGGAACAGAATAACGTCGCGGATGGTATGGCTGTTGGTGAACAGCATTACCATACGGTCGATACCAATTCCCAGACCTGCTGTCGGCGGTAAg < 2:483727/149‑1 (MQ=255) gACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCGGGAACAGAATAACGTCGCGGATGGTATGGCTGTTGGTGAACAGCATTACCATACGGTCGATACCAATTCCCAGACCTGCTGTCGGCGGTAAg < 2:1043644/149‑1 (MQ=255) gACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCGGGAACAGAATAACGTCGCGGATGGTATGGCTGTTGGTGAACAGCATTACCATACGGTCGATACCAATTCCCAGACCTGCTGTCGGCGGTAAg < 1:585952/149‑1 (MQ=255) gACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCGGGAACAGAATAACGTCGCGGATGGTATGGCTGTTGGTGAACAGCATTACCATACGGGCGATACCAATGCCCAGACCTGCTGTCGTCTGTAAg > 1:972882/1‑149 (MQ=255) gACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCAGCGCCGGGAACAGAATAACGTCGCGGATGGTATGGCTGTTGGTGAACAGCATTACCATACGGTCGATACCAATTCCCAGACCTGCTGTCGGCGGTAAg < 1:267536/149‑1 (MQ=255) | GATTATCAATGGTGTGATTTAGCAGATGTATTACACGGTATTGATGCCACGCCGTGGGCGTTCAGTCCGTGGATGGTGATGCAGGCGACAAATCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAAT‑AAAAAAACCCCGACATTTGCCGGGGTTGTGAGCATAACGTAATGCTTATTTTACCGGACGCATCGCCGGGAACAGAATAACGTCGCGGATGGTATGGCTGTTGGTGAACAGCATTACCATACGGTCGATACCAATTCCCAGACCTGCTGTCGGCGGTAAG > NC_000913/3033476‑3033771 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |