New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 781369 =67 (0.530)18 (0.150)
+GAG
10/292 9.4 25.7% noncoding (1/76 nt) lysZ tRNA‑Lys
?NC_000913 = 2521006 39 (0.310)noncoding (76/76 nt) valU tRNA‑Val
Rejected: Coverage evenness skew score above cutoff.

CGAACAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTAAATTTCTTG  >  NC_000913/2520862‑2521150
                                                                                                                                                |                                                                                                                                                
cgaacAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCGCTATACTGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAactac                                                                                                                                             <  2:1760792/150‑1 (MQ=255)
cgaacAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGAGCCCGTCATCACCCACCaattcg                                                                                                                                             >  1:1234452/1‑146 (MQ=255)
 gaacAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAactact                                                                                                                                            <  2:195916/150‑1 (MQ=255)
  aacAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACccaccacgtagtt                                                                                                                                           >  2:1614368/1‑143 (MQ=255)
  aacAATTTCTTTAGAAAATGAGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACtt                                                                                                                                           <  2:1434043/150‑1 (MQ=255)
    cAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTa                                                                                                                                         <  1:479540/150‑1 (MQ=255)
     aaTTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACATGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTAt                                                                                                                                        <  2:1450408/150‑1 (MQ=255)
        ttCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCTCACAGCGGGGGTGATTAGCTCAGCGGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTa                                                                                                                                     <  2:1224448/150‑1 (MQ=255)
        ttCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTa                                                                                                                                     <  2:1218190/150‑1 (MQ=255)
           tttAGATAATGCGTTGACTCATTTTGAACTCTACCTATAATGCGTCTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGTGTCGGCGGTTCGATCGCGTCATCACCCACCAACTACTTTATTTAGtc                                                                                                                                  <  2:239633/150‑1 (MQ=25)
           tttAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGtc                                                                                                                                  <  2:1033739/150‑1 (MQ=255)
              aGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTcc                                                                                                                               >  2:929076/1‑150 (MQ=255)
               gAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCCCCAAGTACTGTATGTAGtcaacg                                                                                                                              >  1:1479228/1‑146 (MQ=255)
                aaaaTGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTccgc                                                                                                                             >  1:667029/1‑150 (MQ=255)
                  aaTGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTccgccg                                                                                                                           <  2:1965630/150‑1 (MQ=255)
                  aaTGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGGCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTccgccg                                                                                                                           <  2:1957954/150‑1 (MQ=255)
                   aTGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCgt                                                                                                                          <  1:1361375/150‑1 (MQ=255)
                      cGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTa                                                                                                                       <  1:895419/150‑1 (MQ=255)
                       gTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGCTCACGTCCACACCGCACAACTACAGTATGAAGTCTCCGCCGTGTAg                                                                                                                      >  1:1561603/1‑150 (MQ=25)
                         tGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTACCa                                                                                                                    <  1:1577818/150‑1 (MQ=255)
                            cTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGa                                                                                                                 <  2:253182/150‑1 (MQ=255)
                                      aCTCTCCCTATAAAGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACCAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAg                                                                                                       <  2:40386/150‑1 (MQ=255)
                                        gctcCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTg                                                                                                     <  2:666613/149‑1 (MQ=255)
                                          tcCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTggg                                                                                                   <  1:1116710/150‑1 (MQ=255)
                                           cccTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTATCCGCCGTGTAGCATGAAATTGAGAAGTgggg                                                                                                  >  1:1815816/1‑149 (MQ=255)
                                                taATGCGACTCCACACCGCGGGGGTGATTAGCTCAGCTGGGAGAGCAGCTCCCTTACAAGGAGGGGGGCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTa                                                                                             <  2:828455/150‑1 (MQ=255)
                                                 aaTGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAg                                                                                            <  2:1162423/150‑1 (MQ=255)
                                                   tGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCt                                                                                          <  2:1371711/150‑1 (MQ=255)
                                                       aCTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGc                                                                                      <  2:522935/150‑1 (MQ=255)
                                                        ctcctcACAGCGGGGGTGATTAGCTCTGCTGGGAGAGCAGCTCCCTTACAAGGAGGTGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCTTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCt                                                                                     <  1:152206/150‑1 (MQ=25)
                                                        cTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCt                                                                                     <  2:667029/150‑1 (MQ=255)
                                                         tCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTg                                                                                    <  2:1693213/150‑1 (MQ=255)
                                                           cacacaGCGGGGGGGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAATGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTggg                                                                                  <  2:218600/150‑1 (MQ=255)
                                                            acacaGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGga                                                                                 <  1:209554/150‑1 (MQ=255)
                                                                                                cTCCCCTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAAATACTGTATGTAGAAGCCGCCGTGTAGCAAGAAAATGAGAAGTGGGTGATAAGCTCAGCTCGGAGAGCACCTCCCTTACAAGGAGGGGGTCTGCGGTTCg                                             >  2:1110474/1‑150 (MQ=25)
                                                                                                 tCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAAATACTTTATGTAGTCTCCGCCGTGTAGCAAGATATTGAGAAGAGGGTGATAAGCTCAGCTGGGAGAGCACCTCCCTAACAAGTAGGGAGTCGGCGGttagc                                            >  2:668550/1‑147 (MQ=37)
                                                                                                                              aTCCCGTCATCACCCACCAACTACTATATGTAGTCTCCGCCGTGAAGCAAGAAATTCCTAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCa               <  1:929076/150‑1 (MQ=21)
                                                                                                                                   gTCATCACCCACCAACTACTTTATGTAGTCTCCGCAGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTACCTTACAAGGAGGGGGTCGGCGGTTCGATCCAGTCATAACCCACAACTTAATAGCCAGCTaa          >  1:1353021/1‑150 (MQ=21)
                                                                                                                                          cccaccAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGATCACCTCCCTTACATGGAGGGGGTCGGCGGTTCGATCCCGTCATAACCCAACACTGTCTCGCCAGATAAATATCtt   >  2:1768103/1‑150 (MQ=25)
                                                                                                                                           ccaccaACTACTTTTTGTAGTCTCCGCCGTGTAGCATGAAATTGAGAATGGGGTGATTAGCTCAGCTGGGAGATCACCTCCCTTACAATGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTAAATTTCTTg  <  1:1800202/150‑1 (MQ=25)
                                                                                                                                                |                                                                                                                                                
CGAACAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTAAATTTCTTG  >  NC_000913/2520862‑2521150

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.