| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2654970 = | NA (NA) | 10 (0.030) | 5/264 | NT | NA | noncoding (1/97 nt) | RIP183 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site | RIP183 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site |
| ? | NC_000913 | 2654995 = | NA (NA) | noncoding (26/97 nt) | RIP183 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site | RIP183 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site | |||||
GGCGCTACGGGACTTGGTGTGCGCACGATAGCTAATCTGTTAACGGCGTAAACTAATATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAATTCTGCAAATTCAACAAATTGCGAATCCCTTGTAGGCCTGATAAGCGTAGCGCATCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2655125‑2654970‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcaggcCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCACTGTTCAAC > NC_000913/2654995‑2655143 GGCGCTACGGGACTTGGTGTGCGCACGATAGCTAATCTGTTAACGGCGTAAACTAATATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAATTCTGCAAATTCAACAAATTGCGAATCCCTTGTAGGCCTGATAAGCGTAGCGCA > 1:3888227/1‑150GGCGCTACGGGACTTGGTGTGCGCACGATAGCTAATCTGTTAACGGCGTAAACTAATATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAATTCTGCAAATTCAACAAATTGCGAATCCCTTGTAGGCCTGATAAGCGTAGCGCA > 1:3888235/1‑150 GCGCTACGGGACTTGGTGTGCGCACGATAGCTAATCTGTTAACGGCGTAAACTAATATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAATTCTGCAAATTCAACAAATTGCGAATCCCTTGTAGGCCTGATAAGCGTAGCGCAT < 1:2067523/150‑1 GCGCGACGGGACTTGGTGTGCGCACGATAGCTAATCTGTTACCGGCGTAAACTAATATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAATTCTGCAAATTCCACAAATTGCGAATCCCTTGTAGGCCTGATAAGCGTAGCGCAT < 2:2870973/150‑1 CGCTACGGGACTTGGTGTGCGCACGATAGCTAATCTGTTAACGGCGTAAACTAATATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAATTCTGCAAATTCAACAAATTGCGAATCCCTTGTAGGCCTGATAAGCGTAGCGCATC > 2:4310765/1‑150 GCTACGGGACTTGGTGTGCGCACGATAGCTAATCTGTTAACGGCGTAAACTAATATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAATTCTGCAAATTCAACAAATTGCGAATCCCTTGTAGGCCTGATAAGCGTAGCGCATCA < 2:2668003/150‑1 GCTACGGGACTTGGTGTGCGCACGATAGCTAATCTGTTAACGGCGTAAACTAATATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAATTCTGCAAATTCAACAAATTGCGAATCCCTTGTAGGCCTGATAAGCGTAGCGCATCA < 1:2190171/150‑1 GCTACGGGACTTGGTGTGCGCACGATAGCTAATCTGTTAACGGCGTAAACTAATATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAATTCTGCAAATTCAACAAATTGCGAATCCCTTGTAGGCCTGATAAGCGTAGCGCATCA < 2:2151223/150‑1 GCTACGGGACTTGGTGTGCGCACGATAGCTAATCTGTTAACGGCGTAAACTAATATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAGTCTGCAAATTCAACAAATTGCGAATCCCTTGTAGGCCGGATACGCGTAGCGCATCA > 2:3354428/1‑150 CTACGGGACTTGGTGTGCGCACGATAGCTAATCTGTTAACGGCGTAAACTAATATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAATTCGGCAAATTCAACAAATTGCGAATCCCTTGTAGGCCTGATAAGCGTAGCGCATCAG < 2:3318319/150‑1 TACGGGACTTGGTGTGCGCACGATAGCTACTCTGATAACGGCGTAAACTAATATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACACCTTCTGCAAATTCAACAAATTGCGAATCCCTTGTAGGCCTGATAAGCGTAGCGCATCAGG < 1:4995918/150‑1 TACGGGACTTGGTGTGCGCACGATAGCTAATCTGTTAACGGCGTAAACTAATCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAATTCTGCAAATTCAACAAATTGCGAATCCCTTGTAGGCCTGATAAGCGTAGCGCATCAGG < 1:4995962/150‑1 TACGGGACTTGGTGTGCGCACGATAGCTAATCTGTTAACGGCGTAAACTAATATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAATTCTGCAAATTCAACAAATTGCGAATCCCTTGTAGGCCTGATAAGCGTAGCGCATCAGG > 2:5170514/1‑150 TACGGGACTTGGTGTGCGCACGATAGCTAATCTGTTAACGGCGTAAACTAATATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAATTCTGCAAATTCAACAAATTGCGAATCCCTGGTAGGCCTGAGAAGCGTAGCGCATCAGG > 2:5170492/1‑150 ACGGGACTTGGTGTGCGCACGATAGCTAATCTGTTAACGGCGTAAACTAATATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAATTCTGCAAATTCAACAAATTGCGAATCCCTTGTAGGCCTGATAAGCGTAGCGCATCAGGC < 2:5316834/150‑1 CGGGACATGGTGTGCGCACGATAGCTAATCTGTTAACGGCGTAAACTAATATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAATTCTGCAAATTCAACAAATTGCGAATCCCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCC > 1:5584366/1‑150 TCCGGCCTACAAATTCTGCAAATTCAACAAATTGCGAATCCCTTGTAGGCCTGCTAAGCGGAGCGCATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGTATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATT > 2:1026563/1‑150 AAATTGCGAATCCCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCCTACAAGGGATTCGCAATTTGGTGAATTTGCAGACGTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATC > 2:3896974/1‑150 GGCCTGATAAGCGTAGCGCATCAGGCATACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCG > 1:5669657/1‑150 GCCTGATAAGCGTAGCGCATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGT > 2:2995857/1‑150 GCCTGATAAGCGTAGCGCATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGT > 2:4560849/1‑150 GCCTGATAAGCGTAGCGCATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACG > 1:656299/1‑86 GCCTGATAAGCGTAGCGCATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACG < 2:656278/86‑1 GCCTGATAAGCGTAGCGCATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACG > 1:656278/1‑86 GCCTGATAAGCGTAGCGCATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACG < 2:656299/86‑1 GCCTGATAAGCGTAGCGCATCAGGCCTACAAGCGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGT > 2:5587134/1‑150 ATCAGGCCTACACGGGATTCGCATTTTGTTGATTTTGCAGATTTTGTAGGCCGGATATGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCACGTCCCGTCGCGCCCGCAGACCACTG < 1:66429/150‑1 ATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCACTG > 2:5431513/1‑150 ATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCACTG > 2:740823/1‑150 TCAGGCCTACAAGGGATTCGCAATTTGTTGATTTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCACTGT < 1:3682093/150‑1 TCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCACTGT > 2:2258444/1‑150 TCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCACTGT < 2:1536586/150‑1 TCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCACTGT < 2:1143957/150‑1 TCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCACTGT < 1:727820/150‑1 TCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCACTGT < 1:3234342/150‑1 TCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCACTGT > 2:5242413/1‑150 AGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCACTTTTC > 2:1469349/1‑150 AGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCACTGTTC > 2:1596243/1‑150 AGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCACTGTTC > 2:4232793/1‑150 AGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCACTGTTC > 2:1077592/1‑150 AGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCACTGTTC > 2:5141576/1‑150 AGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCACTGTTC > 2:5141796/1‑150 AGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCACTGTTC > 2:5141799/1‑150 AGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCACTGTTC > 1:3018156/1‑150 GGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCACTGTTCA > 2:2078407/1‑150 GGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCACTGTTCA > 1:2371726/1‑150 CCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTATGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCACTGTTCAAC > 2:4558505/1‑150 CCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCACTGTTCAAC > 1:1452325/1‑150 CCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCACTGTTCAAC < 1:815379/150‑1 CCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCACTGTTCAAC > 1:1452327/1‑150 GGCGCTACGGGACTTGGTGTGCGCACGATAGCTAATCTGTTAACGGCGTAAACTAATATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAATTCTGCAAATTCAACAAATTGCGAATCCCTTGTAGGCCTGATAAGCGTAGCGCATCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2655125‑2654970‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcaggcCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCACTGTTCAAC > NC_000913/2654995‑2655143 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |