New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4373197 =	NA (NA)	12 (0.040)	6/264	NT	NA	noncoding (1/99 nt)	RIP328 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site	RIP328 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
	?	NC_000913	4373222 =	NA (NA)					noncoding (26/99 nt)	RIP328 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site	RIP328 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

TAATGCGAGGCTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAATTCTCAAGCATTCAATCAGTTGCAATGCCTTATGTAGGCCTGATAAGCGAAGCGCATCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/4373352‑4373197 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcaggcCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATT  >  NC_000913/4373222‑4373369                                                                                                                                                                                                                                                                                                                  TAATGCGAGGCTGGAGCCATCCAGCCTGAAATGGCTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAATTCTCAAGCATTCAATCAGTTGCAATGCCTTATGTAGGCCTGATAAGCGAAGCGCA                                                                                                                                                            >  2:5008864/1‑150  AATGCGAGGCTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAATTCTCAAGCATTCAATCAGTTGCAATGCCTTATGTAGGCCTGATAAGCGAAGCGCAT                                                                                                                                                           <  2:4375221/150‑1  AATGCGAGGCTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAATTCTCAAGCATTCAATCAGTTGCAATGCCTTATGTAGGCCTGATAAGCGAAGCGCAT                                                                                                                                                           <  1:5222233/150‑1  AATGCGAGGCTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAATTCTCAAGCATTCAATCAGTTGCAATGCCTTATGTAGGCCTGATAAGCGAAGCGCAT                                                                                                                                                           >  1:2735244/1‑150  AATGCGAGGCTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGCCTTACCCGGCCTACAAATTCTCAAGCATTCAATCAGTTGCAATGCCTTATGTAGGCCTGATAAGCGAAGCGCAT                                                                                                                                                           <  2:2695884/150‑1   tccaGAGGCTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAATTCTCAAGCATTCAATCAGTTGCAATGCCTTATGTAGGCCTGATAAGCGAAGCGCATC                                                                                                                                                          >  2:5447362/5‑150    TGCGAGGCTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAATTCTCAAGCATTCAATCAGTTGCAATGCCTTATGTAGGCCTGATAAGCGAAGCGCATCA                                                                                                                                                         >  2:4284499/1‑150    TGCGAGGCTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAATTCTCAAGCATTCAATCAGTTGCAATGCCTTATGTAGGCCTGATAAGCGAAGCGCATCA                                                                                                                                                         <  1:949043/150‑1    TGCGAGGCTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAATTCTCAAGCATTCAATCAGTTGCAATGCCTTATGTAGGCCTGATAAGCGAAGCGCATCA                                                                                                                                                         >  2:5377741/1‑150    TGCGAGGCTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAATTCTCAAGCATTCAATCAGTTGCAATGCCTTATGTAGGCCTGATAAGCGAAGCGCATCA                                                                                                                                                         >  1:2706087/1‑150      CGAGGCTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAATTCTCAAGCATTCAATCAGTTGCAATGCCTTATGTAGGCCTGATAAGCGAAGCGCATCAGG                                                                                                                                                       <  1:5975104/150‑1      CGAGGCTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAATTCTCAAGCATTCAATCAGTTGCAATGCCTTATGTAGGCCTGATAAGCGAAGCGCATCAGG                                                                                                                                                       <  1:5975119/150‑1      CGAGGCTGGACCCAACCAGCCAGAAATGACTGATAACGTGATCGTTCGTCATGCCGGATGCCGCGTAAACGCCTTATCCGGCCTACAAATTCACAACCATACAATCAGTTGCAATGCCTTATGTAGGCCTGATAAGCGAAGCGCATCAGG                                                                                                                                                       <  1:2623231/150‑1       GAGGCTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAATTCTCAAGCATTCAATCAGTTGCAATGCCTTATGTAGGCCTGATAAGCGAAGCGCATCAGGC                                                                                                                                                      >  1:3630920/1‑150       GAGGCTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAATTCTCAAGCATTCAATCAGTTGCAATGCCTTATGTAGGCCTGATAAGCGAAGCGCATCAGGC                                                                                                                                                      >  2:3013878/1‑150       GAGGCTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAATTCTCAAGCATTCAATCAGTTGCAATGCCTTATGTAGGCCTGATAAGCGAAGCGCATCAGGC                                                                                                                                                      >  1:1925139/1‑150       GAGGCTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAATTCTCAAGCATTCAATCAGTTGCAATGCCTTATGTAGGCCTGATAAGCGAAGCGCATCAGGC                                                                                                                                                      >  2:134354/1‑150       GAGGCTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAATTCTCAAGCATTCAATCAGTTGCAATGCCTTATGTAGGCCTGATAAGCGAAGCGCATCAGGC                                                                                                                                                      >  1:1925208/1‑150       GAGGCTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAATTCTCAAGCATTCAATCAGTTGCAATGCCTTATGTAGGCCTGATAAGCGAAGCGCATCAGGC                                                                                                                                                      >  2:662774/1‑150       GAGGCTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAATTCTCAAGCATTCAATCAGTTGCAATGCCTTATGTAGGCCTGATAAGCGAAGCGCATCAGGC                                                                                                                                                      >  2:5605332/1‑150       GAGGCTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAATTCTCAAGCATTCAATCAGTTGCAATGCCTTATGTAGGCCTGATAAGCGAAGCGCATCAGGC                                                                                                                                                      >  1:3630884/1‑150       GAGGCTGGAGCCATCCAGCATGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAATTCTCAAGCATTCAATCAGTTGCAATGCCTTATGTAGGCCTGATAAGCGAAGCGCATCAGGC                                                                                                                                                      >  2:784687/1‑150                                                                                                             ATCAGTTGCAATGCCTTATGTAGGCCTGATAAGCGAAGCGCATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATT                                                >  2:2903767/1‑150                                                                                                             ATCAGTTGCAATGCCTTATGTAGGCCTGATAAGCGAAGCGCATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATT                                                >  2:2903782/1‑150                                                                                                                                    GCCTGATAAGCGAAGCGCATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTC                         >  2:5934794/1‑150                                                                                                                                     CCTGATAAGCGAAGCGCATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCG                        >  2:583059/1‑150                                                                                                                                     CCTGATAAGCGAAGCGCATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCG                        >  1:4230915/1‑150                                                                                                                                     CCTGATAAGCGAAGCGCATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCG                        >  1:1381612/1‑150                                                                                                                                     CCTGATAAGCGAAGCGCATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCG                        >  2:3138190/1‑150                                                                                                                                     CCTGATAAGCGAAGCGCATCAGGCCTACATAAGGCATTGCAACTGATTGA                                                                                                                            >  2:89315/1‑50                                                                                                                                     CCTGATAAGCGAAGCGCATCAGGCCTACATAAGGCATTGCAACTGATTGA                                                                                                                            <  1:89315/50‑1                                                                                                                                      CTGATAAGCGAAGCGCATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGC                       >  2:4410583/1‑150                                                                                                                                      CTGATAAGCGAAGCGCATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGC                       >  1:1064343/1‑150                                                                                                                                         ATAAGCGAAGCGCATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATT                    >  1:465612/1‑150                                                                                                                                                      ATCAGGCCTACATCCGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGA       <  2:4843699/150‑1                                                                                                                                                      ATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGA       <  2:3797642/150‑1                                                                                                                                                      ATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGA       <  2:2178604/150‑1                                                                                                                                                      ATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGA       >  1:3765429/1‑150                                                                                                                                                         AGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCACAGAGGAGATTA    >  1:2305556/1‑150                                                                                                                                                           GCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATT  >  1:5340066/1‑150                                                                                                                                                           GCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATT  >  1:4795567/1‑150                                                                                                                                                           GCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATT  >  1:1318654/1‑150                                                                                                                                                                                                                                                                                                                  TAATGCGAGGCTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAATTCTCAAGCATTCAATCAGTTGCAATGCCTTATGTAGGCCTGATAAGCGAAGCGCATCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/4373352‑4373197 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcaggcCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATT  >  NC_000913/4373222‑4373369

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.