| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 715282 = | NA (NA) | 6 (0.010) | 3/264 | NT | NA | noncoding (19/98 nt) | RIP65 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site | RIP65 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site |
| ? | NC_000913 | 3563589 = | NA (NA) | noncoding (8/98 nt) | RIP256 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site | RIP256 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site | |||||
ACGACCAGACTCCTGTTGGTCTTCATTGGGATTTCCTTGAGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCACCATCCTCGTAGGCCTGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/715437‑715282‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctgatGCGCTACGCTTATCAGGC > NC_000913/3563589‑3563606 ACGACCAGACTCCTGTTGGTCTTCATTGGGATTTCCTTGAGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCACCATCCTCGTAGG > 1:2893106/1‑150ACGACCAGACTCCTGTTGGTCTTCATTGGGATTTCCTTGAGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCACCATCCTCGTAGG > 1:5375637/1‑150 CGACCAGACTCCTGTTGGTCTTCATTGGGATTTCCTTGAGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCACCATCCTCGTAGGC < 1:232932/150‑1 CGACCAGACTCCTGTTGGTCTTCATTGGGATTTCCTTGAGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCACCATCCTCGTAGGC < 1:538671/150‑1 GACCAGACTCCTGTTGGTCTTCATTGGGATTTCCTTGAGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACACAATCGCTTAAATTCAAGATATTGCACCATCCTCGTAGGCC > 1:429834/1‑150 GACCAGACTCCTGTTGGTCTTCATTGGGATTTCCTTGAGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCACCATCCTCGTAGGCC > 1:3711822/1‑150 GACCAGACTCCTGTTGGTCTTCATTGGGATTTCCTTGAGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCACCATCCTCGTAGGCC > 1:4409161/1‑150 GACCAGACTCCTGTTGGTCTTCATTGGGATTTCCTTGAGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCACCATCCTCGTAGGCC > 1:4801348/1‑150 GACCAGACTCCTGTTGGTCTTCATTGGGATTTCCTTGAGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCACCATCCTCGTAGGCC > 1:5650115/1‑150 GACCAGACTCCTGTTGGTCTTCATTGGGATTTCCTTGAGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTGTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCTATATATTGCACCATCCTCGTAGGCC > 2:6628897/1‑150 ACCAGACTCCTGTTGGTCTTCATTGGGATTTCCTTGAGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCACCATCCTCGTAGGCCT < 2:7141747/150‑1 ACCAGACTCCTGTTGGTCTTCATTGGGATTTCCTTGAGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCACCATCCTCGTAGGCCT < 2:7141615/150‑1 ACCAGACTCCTGTTGGTCTTCATTGGGATTTCCTTGAGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCACCATCCTCGTAGGCCT < 2:4776862/150‑1 ACCAGACTCCGGTTGGTCTTCATTGGGATTTCCTTGAGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCACCATCCTCGTAGGCCT > 2:1522136/1‑150 CAGACTCCTGTTGGTCTTCATTGGGATTTCCTTGAGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCACCATCCTCGTAGGCCTGA < 1:57954/150‑1 CAGACTCCTGTTGGTCTTCATTGGGATTTCCTTGAGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCACCATCCTCGTAGGCCTGA < 1:6321107/150‑1 CAGACTCCTGTTGGTCTTCATTGGGATTTCCTTGAGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCACCATCCTCGTAGGCCTGA > 2:5650718/1‑150 CAGACTCCTGTTGGTCTTCATTGGGATTTCCTTGAGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCACCATCCTCGTAGGCCTGA < 1:4963329/150‑1 AGACTCCTGTTGGTCTTCATTGGGATTTCCTTGAGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCACCATCCTCGTAGGCCTGAT > 1:4233295/1‑150 TGGTCTTCATTGGGATTTCCTTGAGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCACCATCCTCGTAGGCCTGATGCGCTACGCT < 1:2012473/150‑1 TGGTCTTCATTGGGATTTCCTTGAGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCACCATCCTCGTAGGCCTGATGCGCTACGCT < 1:5357188/150‑1 CATTGGGATTTCCTTGAGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCACCATCCTCGTAGGCCTGATGCGCTACGCTTATCAGG < 1:6445882/150‑1 ATTGGGATTTCCTTGAGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCACCATCCTCGTAGGCCTGATGCGCTACGCTTATCAGGC < 1:3200545/150‑1 ATTGGGATTTCCTTGAGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCACCATCCTCGTAGGCCTGATGCGCTACGCTTATCAGGC < 1:7128091/150‑1 ATTGGGATTTCCTTGAGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCACCATCCTCGTAGGCCTGATGCGCTACGCTTATCAGGC < 1:3820731/150‑1 ACGACCAGACTCCTGTTGGTCTTCATTGGGATTTCCTTGAGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCACCATCCTCGTAGGCCTGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/715437‑715282‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctgatGCGCTACGCTTATCAGGC > NC_000913/3563589‑3563606 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |