| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4442748 | 402 (0.940) | 5 (0.010) | 4/270 | NT | 1.3% | coding (367/1734 nt) | tamA | translocation and assembly module for autotransporter export, outer membrane subunit |
| ? | NC_000913 | = 4442820 | 389 (0.940) | coding (439/1734 nt) | tamA | translocation and assembly module for autotransporter export, outer membrane subunit | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TGGGTTATTACCAGCCGACCATTGAATTTGATCTCCGTCCACCGCCAAAGAAAGGGCGGCAGGTATTGATCGCCAAAGTCACGCCAGGCGTGCCGGTGTTAATTGGCGGCACCGATGTGGTATTGCGCGGCGGCGCGCGGACCGATAAAGACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4442596‑4442748‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gactTTTTGAAATTTTCATAATCGCCCTGGTTCAGTACCGTGCCAATAGCCGGGCGAGTATCGAGCAATTTCAAATAGTCTTTATCGGTCCGCGCGCCGCCGCGCAATACCACATCGGTGCCGCCAATTAACACCGGCACGCCTGGCGTGACT < NC_000913/4442820‑4442672 TGGGTTATTACCAGCCGACCATTGAATTTGATCTCCGTCCACCGCCAAAGAAAGGGCGGCAGGTATTGATCGCCAAAGTCACGCCAGGCGTGCCGGTGTTAATTGGCGGCACCGATGTGGTATTGCGCGGCGGCGCGCGGACCGATAAAG > 1:6204315/1‑150TGGGTTATTACCAGCCGACCATTGAATTTGATCTCCGTCCACCGCCAAAGAAAGGGCGGCAGGTATTGATCGCCAAAGTCACGCCAGGCGTGCCGGTGTTAATTGGCGGCACCGATGTGGTATTGCGCGGCGGCGCGCGGACCGATAAAG > 2:6747558/1‑150TGGGTTATTACCAGCCGACCATTGAATTTGATCTCCGTCCACCGCCAAAGAAAGGGCGGCAGGTATTGATCGCCAAAGTCACGCCAGGCGTGCCGGTGTTAATTGGCGGCACCGATGTGGTATTGCGCGGCGGCGCGCGGACCGATAAAG > 2:5665055/1‑150TGGGTTATTACCAGCCGACCATTGAATTTGATCTCCGTCCACCGCCAAAGAAAGGGCGGCAGGTATTGATCGCCAAAGTCACGCCAGGCGTGCCGGTGTTAATTGGCGGCACCGATGTGGTATTGCGCGGCGGCGCGCGGACCGATAAAG > 2:396029/1‑150TGGGTTATTACCAGCCGACCATTGAATTTGATCTCCGTCCACCGCCAAAGAAAGGGCGGCAGGTATTGATCGCCAAAGTCACGCCAGGCGTGCCGGTGTTAATTGGCGGCACCGATGTGGTATTGCGCGGCGGCGCGCGGACCGATAAAG > 2:395998/1‑150TGGGTTATTACCAGCCGACCATTGAATTTGATCTCCGTCCACCGCCAAAGAAAGGGCGGCAGGTATTGATCGCCAAAGTCACGCCAGGCGTGCCGGTGTTAATTGGCGGCACCGATGTGGTATTGCGCGGCGGCGCGCGGACCGATAAAG > 1:77509/1‑150TGGGTTATTACCAGCCGACCATTGAATTTGATCTCCGTCCACCGCCAAAGAAAGGGCGGCAGGTATTGATCGCCAAAGTCACGCCAGGCGTGCCGGTGTTAATTGGCGGCACCGATGTGGTATTGCGCGGCGGCGCGCGGACCGATAAAG > 1:6242924/1‑150TGGGTTATTACCAGCCGACCATTGAATTTGATCTCCGTCCACCGCCAAAGAAAGGGCGGCAGGTATTGATCGCCAAAGTCACGCCAGGCGTGCCGGTGTTAATTGGCGGCACCGATGTGGTATTGCGCGGCGGCGCGCGGACCGATAAAG > 1:5426544/1‑150TGGGTTATTACCAGCCGACCATTGAATTTGATCTCCGTCCACCGCCAAAGAAAGGGCGGCAGGTATTGATCGCCAAAGTCACGCCAGGCGTGCCGGTGTTAATTGGCGGCACCGATGTGGTATTGCGCGGCGGCGCGCGGACCGATAAAG > 1:5416476/1‑150TGGGTTATTACCAGCCGACCATTGAATTTGATCTCCGTCCACCGCCAAAGAAAGGGCGGCAGGTATTGATCGCCAAAGTCACGCCAGGCGTGCCGGTGTTAATTGGCGGCACCGATGTGGTATTGCGCGGCGGCGCGCGGACCGATAAAG > 1:4379895/1‑150TGGGTTATTACCAGCCGACCATTGAATTTGATCTCCGTCCACCGCCAAAGAAAGGGCGGCAGGTATTGATCGCCAAAGTCACGCCAGGCGTGCCGGTGTTAATTGGCGGCACCGATGTGGTATTGCGCGGCGGCGCGCGGACCGATAAAG > 1:4041372/1‑150 GGGTTATTACCAGCCGACCATTGAATTTGATCTCCGTCCACCGCCAAAGAAAGGGCGGCAGGTATTGATCGCCAAAGTCACGCCAGGCGTGCCGGTGTTAATTGGCGGCACCGTTGTGGTTTTGCGCGGCGGCGCGCGGACCGATAAAGA < 1:5672553/150‑1 GGTTATTACCAGCCGACCATTGAATTTGATCTCCGTCCACCGCCAAAGAAAGGGCGGCAGGTATTGATCGCCAAAGTCACGCCAGGCGTGCCGGTGTTAATTGGCGGCACCGATGTGGTATTGCGCGGCGGCGCGCGGACCGATAAAGAC > 2:2892027/1‑150 AGCCGACCAGGGAAGGTGATCTCCGTCCACCGCCAAAGAAAGGGCGGCAGGGATTGATCGCCAAAGTCACGCCAGGCGTGCCGGGGTGAAGTGGCGGCACCGATGTGGTATTGCGCGGCGGCGCGCGGACCGATAACGACTCTTTGAcag > 2:6070805/1‑147 CTCCGTCCACCGCCAAAGAAAGGGCGGCAGGTATTGATCGCCAAAGTCACGCCAGGCGTGCCGGTGTTAATTGGCGGCACCGATGTGGTATTGCGCGGCGGCGCGCGGACCGATAAAGACTTTTTGAAATTTTCATAATCGCCCTGGTTC > 1:3877934/1‑150 CGCCAAAGAAAGGGCGGCAGGTATTGATCGCCAAAGTCACGCCAGGCGTGCCGGTGTTAATTGGCGGCACCGATGTGGTATTGCGCGGCGGCGCGCGGACCGATAAAGACTTTTTGAAATTTTCATAATCGCCCTGGTTCAGTACCGTGC > 1:1684630/1‑150 GCGTGCCGGTGTTAATTGGCGGCACCGATGTGGTATTGCGCGGCGGCGCGCGGACCGATAAAGACTTTTTGAAATTTTCATAATCGCCCTGGTTCAGTACCGTGCCAATAGCCGGGCGAGTATCGAGCAATTTCAAATAGTCTTTATCGG < 2:1684630/150‑1 TGCCGGTGTTAATTGGCGGCACCGATGTGGTATTGCGCGGCGGCGCGCGGACCGATAAAGACTTTTTGAAATTTTCATAATCGCCCTGGTTCAGTACCGTGCCAATAGCCGGGCGAGTATCGAGCAATTTCAAATAGTCTTTATCGGTCC < 2:3877934/150‑1 ACTTTTTGAAATTTTCATAATCGCCCTGGTTCAGTACCGTGCCAATAGCCGGGCGAGTATCGAGCAATTTCAAATAGTCTTTATCGGTCCGCGCGCCGCCGCGCAATACCACATCGGTGCCGCCAATTAACACCGGCACGCCTGGCGTGA > 2:5601848/1‑150 CTTTTTGAAATTTTCATAATCGCCCTGGTTCAGTACCGTGCCAATAGCCGGGCGAGTATCGAGCAATTTCAAATAGTCTTTATCGGTCCGCGCGCCGCCGCGCAATACCACATCGGTGCCGCCAATTAACACCGGCACGCCTGGCGTGAC < 1:6752979/150‑1 CTTTTTGAAATTTTCATAATCGCCCTGGTTCAGTACCGTGCCAATAGCCGGGCGAGTATCGAGCAATTTCAAATAGTCTTTATCGGTCCGCGCGCCGCCGCGCAATACCACATCGGTGCCGCCAATTAACACCGGCACGCCTGGCGTGAC > 1:4962258/1‑150 CTTTTTGAAATTTTCATAATCGCCCTGGTTCAGTACCGTGCCAATAGCCGGGCGAGTATCGAGCAATTTCAAATAGTCTTTATCGGTCCGCGCGCCGCCGCGCAATACCACATCGGTGCCGCCAATTAACACCGGCACGCCTGGCGTGAC > 1:4961837/1‑150 TTTTTGAAATTTTCATAATCGCCCTGGTTCAGTACCGTGCCAATAGCCGGGCGAGTATCGAGCAATTTCAAATAGTCTTTATCGGTCCGCGCGCCGCCGCGCAATACCACATCGGTGCCGCCAATTAACACCGGCACGCCTGGCGTGACT > 2:6218044/1‑150 TTTTTGAAATTTTCATAATCGCCCTGGTTCAGTACCGTGCCAATAGCCGGGCGAGTATCGAGCAATTTCAAATAGTCTTTATCGGTCCGCGCGCCGCCGCGCAATACCACATCGGTGCCGCCAATTAACACCGGCACGCCTGGCGTGACT > 1:2819484/1‑150 TTTTTGAAATTTTCATAATCGCCCTGGTTCAGTACCGTGCCAATAGCCGGGCGAGTATCGAGCAATTTCAAATAGTCTTTATCGGTCCGCGCGCCGCCGCGCAATACCACATCGGTGCCGCCAATTAACACCGGCACGCCTGGCGTGACT > 2:6218889/1‑150 TTTTTGAAATTTTCATAATCGCCCTGGTTCAGTACCGTGCCAATAGCCGGGCGAGTATCGAGCAATTTCAAATAGTCTTTATCGGTCCGCGCGCCGCCGCGCAATACCACATCGGTGCCGCCAATTAACACCGGCACGCCTGGCGTGACT > 1:2819691/1‑150 TTTTTGAAATTTTCATAATCGCCCTGGTTCAGTACCGTGCCAATAGCCGGGCGAGTATCGAGCAATTTCAAATAGTCTTTATCGGTCCGCGCGCCGCCGCGCAATACCACATCGGTGCCGCCAATTAACACCGGCACGCCTGGCGTGACT > 1:3529055/1‑150 TTTTTGAAATTTTCATAATCGCCCTGGTTCAGTACCGTGCCAATAGCCGGGCGAGTATCGAGCAATTTCAAATAGTCTTTATCGGTCCGCGCGCCGCCGCGCAATACCACATCGGTGCCGCCAATTAACACCGGCACGCCTGGCGTGACT > 1:6488598/1‑150 TTTTTGAAATTTTCATAATCGCCCTGGTTCAGTACCGTGCCAATAGCCGGGCGAGTATCGAGCAATTTCAAATAGTCTTTATCGGTCCGCGCGCCGCCGCGCAATACCACATCGGTGCCGCCAATTAACACCGGCACGCCTGGCGTGACT > 1:6488354/1‑150 TTTTTGAAATTTTCATAATCGCCCTGGTTCAGTACCGTGCCAATAGCCGGGCGAGTATCGAGCAATTTCAAATAGTCTTTATCGGTCCGCGCGCCGCCGCGCAATACCACATCGGTGCCGCCAATTAACACCGGCACGCCTGGCGTGACT > 1:3529117/1‑150 TTTTTGAAATTTTCATAATCGCCCTGGTTCAGTACCGTGCCAATAGCCGGGCGAGTATCGAGCAATTTCAAATAGTCTTTATCGGTCCGCGCGCCGCCGCGCAATACCACATCGGTGCCGCCAATTAACACCGGCACGCCTGGCGTGACT > 1:1260995/1‑150 TTTTTGAAATTTTCATAATCGCCCTGGTTCAGTACCGTGCCAATAGCCGGGCGAGTATCGAGCAATTTCAAATAGTCTTTATCGGTCCGCGCGCCGCCGCGCAATACCACATCGGTGCCGCCAATTAACACCGGCACGCCTGGCGTGACT > 1:5894520/1‑150 TTTTTGAAATTTTCATAATCGCCCTGGTTCAGTACCGTGCCAATAGCCGGGCGAGTATCGAGCAATTTCAAATAGTCTTTATCGGTCCGCGCGCCGCCGCGCAATACCACATCGGTGCCGCCAATTAACACCGGCACGCCTGG > 2:1393578/1‑143 TTTTTGAAATTTTCATAATCGCCCTGGTTCAGTACCGTGCCAATAGCCGGGCGAGTATCGAGCAATTTCAAATAGTCTTTATCGGTCCGCGCGCCGCCGCGCAATACCACATCGGTGCCGCCAATTAACACCGGCACGCCTGG < 1:1393578/143‑1 TTTTTGAAATTTTCATAATCGCCCTGGTTCAGTACCGTGCCAATAGCCGGGCGAGTATCGAGCAATTTCAAATAGTCTTTATCGGTCCGCGCGCCGCCGCGCAATACCACATCGGTGCCGCCAAATAACACCGGCACGCCTGGCGTGACT > 1:5031226/1‑150 TGGGTTATTACCAGCCGACCATTGAATTTGATCTCCGTCCACCGCCAAAGAAAGGGCGGCAGGTATTGATCGCCAAAGTCACGCCAGGCGTGCCGGTGTTAATTGGCGGCACCGATGTGGTATTGCGCGGCGGCGCGCGGACCGATAAAGACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4442596‑4442748‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gactTTTTGAAATTTTCATAATCGCCCTGGTTCAGTACCGTGCCAATAGCCGGGCGAGTATCGAGCAATTTCAAATAGTCTTTATCGGTCCGCGCGCCGCCGCGCAATACCACATCGGTGCCGCCAATTAACACCGGCACGCCTGGCGTGACT < NC_000913/4442820‑4442672 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |