| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4445176 = | 517 (1.210) | 8 (0.020) | 5/264 | NT | 1.7% | coding (1065/3780 nt) | tamB | translocation and assembly module for autotransporter export, inner membrane subunit |
| ? | NC_000913 | 4445210 = | 442 (1.090) | coding (1099/3780 nt) | tamB | translocation and assembly module for autotransporter export, inner membrane subunit | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AGGGTAATAGTCGCGGGCGGGATCTCCTGTCCCTTCACTGCCGTACGCATAGAGAGCGTGTAATCGGTCATTTTGCCGGTAAGTTTCAGTTTCAGATCATCCGCCTGATACTGCTTCTCACCAGTGAACGGCCAGTAAAGCTGTTTGCTGTTCACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4445331‑4445176‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttcactGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGCCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACAGCAGGT > NC_000913/4445210‑4445358 AGGGTAATAGTCGCGGGCGGGATCTCCTGTCCCTTCACTGCCGTACGCATAGAGAGCGTGTAATCGGTCATTTTGCCGGTAAGTTTCAGTTTCAGATCATCCGCCTGATACTGCTTCTCACCAGTGAACGGCCAGTAAAGCTGTTTGCTG < 1:3674989/150‑1AGGGTAATAGTCGCGGGCGGGATCTCCTGTCCCTTCACTGCCGTACGCATAGAGAGCGTGTAATCGGTCATTTTGCCGGTAAGTTTCAGTTTCAGATCATCCGCCTGATACTGCTTCTCACCAGTGAACGGCCAGTAAAGCTGTTTGCTG < 1:3675663/150‑1AGGGTAATAGTCGCGGGCGGGATCTCCTGTCCCTTCACTGCCGTACGCATAGAGAGCGTGTAATCGGTCATTTTGCCGGTAAGTTTCAGTTTCAGATCATCCGCCTGATACTGCTTCTCACCAGTGAACGGCCAGTAAAGCTGTTTGCTG < 1:3676055/150‑1 GGTAATAGTCGCGGGCGGGATCTCCTGTCCCTTCACTGCCGTACGCATAGAGAGCGTGTAATCGGTCATTTTGCCGGTAAGTTTCAGTTTCAGATCATCCGCCTGATACTGCTTCTCACCAGTGAACGGCCAGTAAAGCTGTTTGCTGTT < 2:6739005/150‑1 GGTAATAGTCGCGGGCGGGATCTCCTGTCCCTTCACTGCCGTACGCATAGAGAGCGTGTAATCGGTCATTTTGCCGGTAAGTTTCAGTTTCAGATCATCCGCCTGATACTGCTTCTCACCAGTGAACGGCCAGTAAAGCTGTTTGCTGTT < 2:6738850/150‑1 GGTAATAGTCGCGGGCGGGATCTCCTGTCCCTTCACTGCCGTACGCATAGAGAGCGTGTAATCGGTCATTTTGCCGGTAAGTTTCAGTTTCAGATCATCCGCCTGATACTGCTTCTCACCAGTGAACGGCCAGTAAAGCTGTTTGCTGTT < 2:3653020/150‑1 GGTAATAGTCGCGGGCGGGATCTCCTGTCCCTTCACTGCCGTACGCATAGAGAGCGTGTAATCGGTCATTTTGCCGGTAAGTTTCAGTTTCAGATCATCCGCCTGATACTGCTTCTCACCAGTGAACGGCCAGTAAAGCTGTTTGCTGTT < 2:3563903/150‑1 GGTAATAGTCGCGGGCGGGATCTCCTGTCCCTACACTGCCGTACGCATAGAGAGCGTGTAATCGGTCATTTTGCCGGTAAGTTACAGTTTCAGATCATCCGCCTGATACTGCTTCTCACCAGTGAACGGCCAGTAAAGCTGTTTGCTGTT < 2:4707600/150‑1 GTAATAGTCGCGGGCGGGATCTCCTGTCCCTTCACTGCCGTACGCATAGAGAGCGTGTAATCGGTCATTTTGCCGGTAAGTTTCAGTTTCAGATCATCCGCCTGATACTGCTTCTCACCAGTGAACGGCCAGTAAAGCTGTTTGCTGTTC < 2:3314/150‑1 TAATAGTCGCGGGCGGGATCTCCTGTCCCTTCACTGCCGTACGCATAGAGAGCGTGTAATCGGTCATTTTGCCGGTAAGTTTCAGTTTCAGATCATCCGCCTGATACTGCTTCTCACCAGTGAACGGCCAGTAAAGCTGTTTGCTGTTCA < 2:1361672/150‑1 TAATAGTCGCGGGCGGGATCTCCTGTCCCTTCACTGCCGTACGCATAGAGAGCGTGTAATCGGTCATTTTGCCGGTAAGTTTCAGTTTCAGATCATCCGCCTGATACTGCTTCTCACCAGTGAACGGCCAGTAAAGCTGTTTGCTGTTCA < 1:6887215/150‑1 TAATAGTCGCGGGCGGGATCTCCTGTCCCTTCACTGCCGTACGCATAGAGAGCGTGTAATCGGTCATTTTGCCGGTAAGTTTCAGTTTCAGATCATCCGCCTGATACTGCTTCTCACCAGTGAACGGCCAGTAAAGCTGTGTGCTGTTCA > 2:3539690/1‑150 TAATAGTCGCGGGCGGGATCTCCTGTCCCTTCACTGCCGTACGCATAGAGAGCGTGTAATCGGTCATTTTGCCGGTAAGTTTCAGTTTCAGATCATCCGCCTGATACTGCTTCTCACAAGTGAACGGCCAGTAAAGCTGTTTGCTGTTCA > 2:671582/1‑150 AATAGTCGCGGGCGGGATCTCCTGTCCCTTCACTGCCGTACGCATAGAGAGCGTGTAATCGGTCATTTTGCCGGTAAGTTTCAGTTTCAGATCATCCGCCTGATACTGCTTCTCACCAGTGAACGGCCAGTAAAGCTGTTTGCTGTTCAC > 1:2872840/1‑150 AATAGTCGCGGGCGGGATCTCCTGTCCCTTCACTGCCGTACGCATAGAGAGCGTGTAATCGGTCATTTTGCCGGTAAGTTTCAGTTTCAGATCATCCGCCTGATACTGCTTCTCACCAGTGAACGGCCAGTAAAGCTGTTTGCTGTTCAC < 2:3644483/150‑1 CGCATAGAGAGCGTGTAATCGGTCATTTTGCCGGTAAGTTTCAGTTTCAGATCATCCGCCTGATACTGCTTCTCACCAGTGAACGGCCAGTAAAGCTGTTTGCTGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAA < 2:4928867/150‑1 CACCAGTGAACGGCCAGTAAAGCTGTTTGCTGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGCCCGCGA > 1:5615680/1‑150 CACCAGTGAACGGCCAGTAAAGCTGTTTGCTGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGCCCGCGA > 2:2083521/1‑150 CACCAGTGAACGGCCAGTAAAGCTGTTTGCTGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGCCCGCGA > 1:2000967/1‑150 CACCAGTGAACGGCCAGTAAAGCTGTTTGCTGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCCCCCGCGA > 2:5252955/1‑150 ACCAGTGAACGGCCAGTAAAGCTGTTTGCTGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGCCCGCGAC > 2:749496/1‑150 GTGAACGGCCAGTAAAGCTGTTTGCTGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGCCCGCGACTATT > 1:339537/1‑150 GGCCAGTAAAGCTGTTTGCTGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGCCCGCGACTATTACCCTC < 1:749496/150‑1 GTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGCCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACA < 2:1208652/150‑1 GTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGCCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACA > 2:7038363/1‑150 GTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGCCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACA < 2:6168968/150‑1 TTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGCCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACAG < 2:1194714/150‑1 TTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGCCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACAG > 1:7177982/1‑150 TTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGCCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACAG > 1:5603235/1‑150 TTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGCCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACAG > 1:5603216/1‑150 TTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGCCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACAG < 1:3742666/150‑1 TTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGCCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACAG > 2:6541480/1‑150 TCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGCCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACAGC > 1:1400138/1‑150 TCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGCCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACAGC < 2:5007050/150‑1 TCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCACGCCCGCGACTATTACCCTCGACGCCAAAGGTACTGAACAGC > 1:5028362/1‑150 TCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCCATGCGTACGGCAGTGAAGGGACAGGAGATCCCGCCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACAGC > 1:5028343/1‑150 CACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAATCTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGCCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACAGCA < 1:334378/150‑1 CACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGCCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACAGCA > 1:4028551/1‑150 CACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGCCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACAGCA < 2:6282754/150‑1 CACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGCCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACAGCA < 2:7048140/150‑1 ACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGCCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACAGCAG < 1:3877846/150‑1 ACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGCCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACAGCAG > 2:6844447/1‑150 ACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGCCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACAGCAG < 1:6362181/150‑1 CTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGCCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACAGCAGG > 1:6022874/1‑150 TGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGCCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACAGCAGGT > 1:4688902/1‑150 AGGGTAATAGTCGCGGGCGGGATCTCCTGTCCCTTCACTGCCGTACGCATAGAGAGCGTGTAATCGGTCATTTTGCCGGTAAGTTTCAGTTTCAGATCATCCGCCTGATACTGCTTCTCACCAGTGAACGGCCAGTAAAGCTGTTTGCTGTTCACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4445331‑4445176‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttcactGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGCCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACAGCAGGT > NC_000913/4445210‑4445358 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |