| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4614759 = | 618 (1.440) | 19 (0.050) | 7/270 | NT | 3.1% | coding (785/864 nt) | yjjW | putative pyruvate formate lyase activating enzyme |
| ? | NC_000913 | 4614791 = | 595 (1.430) | coding (753/864 nt) | yjjW | putative pyruvate formate lyase activating enzyme | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TTTGCTGGTGATCCCTGGCCAGGTGGATTATTTGCAACACATCGAAGAACTGGCGGCGTTTATCAAGGGACTCGGCGATGTTCCGGTACGCCTGAACGCGTTTCATGCCCACGGCGTGTATGGCGAGGCGCAAAGCTGGGCGAGCGCCACGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4614911‑4614759‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcc‑‑‑ATAC‑‑‑ACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGCTTGCCGCGCTCTG > NC_000913/4614791‑4614939 TTTGCTGGTGATCCCTGGCCAGGTGGATTATTTGCAACACATCGAAGAACTGGCGGCGTTTATCAAGGGACTCGGCGATGTTCCGGTACGCCTGAACGCGTTTCATGCCCACGGCGTGTATGGCGAGGCGCAAAGCTGGGCGCGCGCCAC > 1:1828162/1‑150 TGCTGGTGATCCCTGGCCAGGTGGATTATTTGCAACACATCGAAGAACTGGCGGCGTTTATCAAGGGACTCGGCGATGTTCCGGTACGCCTGAACGCGTTTCATGCCCACGGCGTGTATGGCGAGGCGCAAAGCTGGGCGAGCGCCACGC > 1:7000667/1‑150 TGCTGGTGATCCCTGGCCAGGTGGATTATTTGCAACACATCGAAGAACTGGCGGCGTTTATCAAGGGACTCGGCGATGTTCCGGTACGCCTGAACGCGTTTCATGCCCACGGCGTGTATGGCGAGGCGCAAAGCTGGGCGAGCGCCACGC > 1:7000605/1‑150 TGCTGGTGATCCCTGGCCAGGTGGATTATTTGCAACACATCGAAGAACTGGCGGCGTTTATCAAGGGACTCGGCGATGTTCCGGTACGCCTGAACGCGTTTCATGCCCACGGCGTGTATGGCGAGGCGCAAAGCTGGGCGAGCGCCACGC > 1:6210018/1‑150 TGCTGGTGATCCCTGGCCAGGTGGATTATTTGCAACACATCGAAGAACTGGCGGCGTTTATCAAGGGACTCGGCGATGTTCCGGTACGCCTGAACGCGTTTCATGCCCACGGCGTGTATGGCGAGGCGCAAAGCTGGGCGAGCGCCACGC > 1:3085646/1‑150 GCTGGTGATCCCTGGCCAGGTGGATTATTTGCAACACATCGAAGAACTGGCGGCGTTTATCAAGGGACTCGGCGATGTTCCGGTACGCCTGAACGCGTTTCATGCCCACGGCGTGTATGGCGAGGCGCAAAGCTGGGCGAGCGCCACGCC < 1:1862061/150‑1 GCTGGTGATCCCTGGCCAGGTGGATTATTTGCAACACATCGAAGAACTGGCGGCGTTTATCAAGGGACTCGGCGATGTTCCGGTACGCCTGAACGCGTTTCATGCCCACGGCGTGTATGGCGAGGCGCAAAGCTGGGCGAGCGCCACGCC > 2:2550092/1‑150 CGCGTTTCATGCCCACGGCGTGTATGGCGAGGCGCAAAGCTGGGCGAGCGCCACGCC‑‑‑ATAC‑‑‑ACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATA > 2:3470609/1‑150 GTTTCATGCCCACGGCGTGTATGGCGAGGCGCAAAGCTGGGCGAGCGCCACGCCGGAAGACGTTGAGCCGTTGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAA > 2:7203570/1‑150 CACGGCGTGTATGGCGAGGCGCAAAGCTGGGCGAGCGCCACGCC‑‑‑ATAC‑‑‑ACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCA > 2:2800306/1‑150 GTGTATGGCGAGGCGCAAAGCTGGGCGAGCGCCACGCC‑‑‑ATAC‑‑‑ACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATC > 2:2803713/1‑150 GTGTATGGCGAGGCGCAAAGCTGGGCGAGCGCCACGCC‑‑‑ATAC‑‑‑ACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATC > 2:2803698/1‑150 GTGTAAGGCGAGGCGCAAAGCTGGGCGAGCGCCACGCC‑‑‑ATAC‑‑‑ACGCCGTGGGCAAGAAACGCGTTCAGGGGTACCGGAACATCGCCGAGGCCCTTGATAAACGCCGCCACATCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGcac > 1:4315389/1‑147 TATGGCGAGGCGCAAAGCTGGGCGAGCGCCACGCC‑‑‑GTAC‑‑‑ACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACC > 2:6111953/1‑150 TATGGCGAGGCGCAAAGCTGGGCGAGCGCCACGCC‑‑‑GTAC‑‑‑ACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACC > 2:5313585/1‑150 TATGGCGAGGCGCAAAGCTGGGCGAGCGCCACGCC‑‑‑GTAC‑‑‑ACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACC > 2:5313508/1‑150 GGCGAGGCGCAAAGCTGGGCGAGCGCCACGCC‑‑‑ATAC‑‑‑ACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGC > 1:4579393/1‑150 GGCGAGGCGCAAAGCTGGGCGAGCGCCACGCC‑‑‑ATAC‑‑‑ACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGC > 1:4604318/1‑150 GGCGAGGCGCAAAGCTGGGCGAGCGCCACGCC‑‑‑ATAC‑‑‑ACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGC > 1:6614006/1‑150 GAGGCGCAAAGCTGGGCGAGCGCCTCGCC‑‑‑ATAC‑‑‑ACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAA > 1:2876005/1‑150 GAGGCGCAAAGCTGGGCGAGCGCCTCGCC‑‑‑ATAC‑‑‑ACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAA > 1:881035/1‑150 GAGGCGCAAAGCTGGGCGAGCGCCACGCC‑‑‑GTAC‑‑‑ACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAA > 2:3962941/1‑150 GAGGCGCAAAGCTGGGCGAGCGCCACGCC‑‑‑GTAC‑‑‑ACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAA > 2:2726026/1‑150 GAGGCGCAAAGCTGGGCGAGCGCCACGCC‑‑‑ATAC‑‑‑ACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAA > 1:6921390/1‑150 GAGGCGCAAAGCTGGGCGAGCGCCACGCC‑‑‑ATAC‑‑‑ACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAA > 1:6561100/1‑150 GAGGCGCAAAGCTGGGCGAGCGCCACGCC‑‑‑ATAC‑‑‑ACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAA > 1:4697752/1‑150 CGCC‑‑‑ATAC‑‑‑ACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGCTTGCCGCGCT < 1:1708974/150‑1 CGCC‑‑‑ATAC‑‑‑ACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGCTTGCCGCGCT < 2:2315911/150‑1 GCC‑‑‑ATAC‑‑‑ACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGCTTGCCGCGCTC > 1:4838238/1‑150 GCC‑‑‑ATAC‑‑‑ACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGCTTGCCGCGCTC > 1:2295287/1‑150 GCC‑‑‑ATAC‑‑‑ACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGCTTGCCGCGCTC > 1:2296055/1‑150 GCC‑‑‑ATAC‑‑‑ACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGCTTGCCGCGCTC > 2:5615717/1‑150 CC‑‑‑ATAC‑‑‑ACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGCTTGCCGCGCTCT > 2:3978327/1‑150 CC‑‑‑ATAC‑‑‑ACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGCTTGCCGCGCTCT < 1:5057399/150‑1 CC‑‑‑ATAC‑‑‑ACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGCTTGCCGCGCTCT < 2:5760309/150‑1 CC‑‑‑ATAC‑‑‑ACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGCTTGCCGCGCTCT < 2:5674295/150‑1 CC‑‑‑ATAC‑‑‑ACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGCTTGCCGCGCTCT > 2:5506069/1‑150 CC‑‑‑ATAC‑‑‑ACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGCTTGCCGCGCTCT > 1:5564438/1‑150 CC‑‑‑ATAC‑‑‑ACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGCTTGCCGCGCTCT < 2:1962282/150‑1 CC‑‑‑ATAC‑‑‑ACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGCTTGCCGCGCTCT > 1:1762757/1‑150 CC‑‑‑ATAC‑‑‑ACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGCTTGCCGCGCTCT > 1:6407901/1‑150 CC‑‑‑ATAC‑‑‑ACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGCTTGCCGCGCTCT < 2:2557863/150‑1 C‑‑‑ATAC‑‑‑ACGCCGTGGGCATGAAACGCGTTCAGGTGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGCTTGCCGCGCTCTG < 2:1695235/150‑1 C‑‑‑ATAC‑‑‑ACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGCTTGCCGCGCTCTG < 2:4958568/150‑1 C‑‑‑ATAC‑‑‑ACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGCTTGCCGCGCTCTG < 1:6116738/150‑1 C‑‑‑ATAC‑‑‑ACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGCTTGCCGCGCTCTG < 1:2520880/150‑1 C‑‑‑ATAC‑‑‑ACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGCTTGCCGCGCTCTG < 1:2520759/150‑1 C‑‑‑ATAC‑‑‑ACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGCTTGCCGCGCTCTG > 2:1676269/1‑150 C‑‑‑ATAC‑‑‑ACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGCTTGCCGCGCTCTG > 2:700398/1‑150 TTTGCTGGTGATCCCTGGCCAGGTGGATTATTTGCAACACATCGAAGAACTGGCGGCGTTTATCAAGGGACTCGGCGATGTTCCGGTACGCCTGAACGCGTTTCATGCCCACGGCGTGTATGGCGAGGCGCAAAGCTGGGCGAGCGCCACGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4614911‑4614759‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcc‑‑‑ATAC‑‑‑ACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGCTTGCCGCGCTCTG > NC_000913/4614791‑4614939 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |