New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 543165NA (NA)9 (0.020) 6/264 NT NA noncoding (79/97 nt) RIP50 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP50 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
?NC_000913 = 543176 NA (NA)noncoding (90/97 nt) RIP50 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP50 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

Only 100 of 324 total aligned reads displayed.

AAACTAACCCTTACCTTTAAAGCGGATGCGATTTATATCGCATAAGAGTGCAGTACTCATGCCGGATGCGGCATGAGTACCATATCCTTCCTGAAAATCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCAAAATCCAACATAGCTAAAAATAATCAGGCGAGTGGTATGACTTAAATCTCTACGTCGCGGTTACAATCTTTCGAGTAAATATAGCTGAACGCTTCACCACGCCCTA  >  NC_000913/543027‑543325
                                                                                                                                                     |                                                                                                                                                     
acaCTAACCCTTACCTTTAAAGCGGATGCGATTTATATCGCATAAGAGTGCAGTACTCATGCCGGATGCGGCATGAGTACCATATCCTTCCTGTAAATCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAgcgc                                                                                                                                                       <  1:7205941/148‑1 (MQ=255)
aaaCTAACCCTTACCTTTAAAGCGGATGCGATTTATATCGCATAAGAGTGCAGTACTCATGCCGGATGCGGCATGAGTACCATATCCTTCCTGAAAATCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAgcgc                                                                                                                                                       >  2:1666411/1‑150 (MQ=255)
aaaCTAACCCTTACCTTTAAAGCGGATGCGATTTATATCGCATAAGAGTGCAGTACTCATGCCGGATGCGGCATGAGTACAATATCCTTCCTGAAATTCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAgcgc                                                                                                                                                       <  1:1214025/150‑1 (MQ=255)
  aCTAACCCTTACCTTTAAAGCGGATGCGATTTATATCGCATAAGAGTGCAGTACTCATGCCGGATGCGGCATGAGTACCATATCCTTCCTGAAAATCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCat                                                                                                                                                     <  1:4248272‑M2/150‑3 (MQ=255)
    tAACCCTTACCTTTAAAGCGGATGCGATTTATATCGCATAAGAGTGCAGTACTCATGCCGGATGCGGCATGAGTACCATATCCTTCCTGAAAATCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCatca                                                                                                                                                   <  1:4067617‑M2/150‑5 (MQ=255)
    tAACCCTTACCTTTAAAGCGGATGCGATTTATATCGCATAAGAGTGCAGTACTCATGCCGGATGCGGCATGAGTACCATATCCTTCCTGAAAATCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCatca                                                                                                                                                   <  1:1707512‑M2/150‑5 (MQ=255)
      aCCCTTACCTTTAAAGCGGATGCGATTTATATCGCATAAGAGTGCTGTACTCATGCCGGATGCGGCATGAGTACCATATCCTTCCTGAAAATCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCatcagg                                                                                                                                                 >  1:1853921‑M2/1‑144 (MQ=255)
      aCCCTTAACTTTAAAGCGGATGCTATTTATATCGCATAAGAGTGCAGTACTCATGCCGGATGCGGCATGAGTACCATATCCTTCCTGAAAATCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCatcagg                                                                                                                                                 >  1:5472715‑M2/1‑144 (MQ=255)
         cTTACCTTTAAAGCGGATGCGATTTATATCGCATAAGAGTGCAGTACTCATGCCGGATGCGGCATGAGTACCATATCCTTCCTGAAAATCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCaa                                                                                                                                              <  1:1012070/150‑1 (MQ=255)
               tttAAAGCGGATGCGATTTATATCGCATAAGAGTGCAGTACTCATGCCGGATGCGGCATGAGTACCATATCCTTCCTGAAAATCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTAc                                                                                                                                        >  1:5968574/1‑150 (MQ=255)
                    aGCGGATGCGATTTATATCGCATAAGAGTGCAGTACTCATGCCGGATGCGGCATGAGTACCATATCCTTCCTGAAAATCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACaaaaa                                                                                                                                   <  1:4382419/150‑1 (MQ=255)
                     gCGGATGCGATTTATATCGCATAAGAGTGCAGTACTCATGCCGGATGCGGCATGAGTACCATATCCTTCCTGAAAATCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACaaaaaa                                                                                                                                  <  1:3280425/150‑1 (MQ=255)
                      cGGATGCGATTTATATCGCATAAGAGTGCAGTACTCATGCCGGATGCGGCATGAGTACCATATCCTTCCTGAAAATCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACaaaaaaa                                                                                                                                 <  2:508624/150‑1 (MQ=255)
                      cGGATGCGATTTATATCGCATAAGAGTGCAGTACTCATGCCGGATGCGGCATGAGTACCATATCCTTCCTGAAAATCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACaaaaaaa                                                                                                                                 <  1:3743378/150‑1 (MQ=255)
                        gATGCGATTTATATCGCATAAGAGTGCAGTACTCATGCCGGATGCGGCATGAGTACCATATCCTTCCTGAAAATCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGc                                                                                                                               <  2:5837433/150‑1 (MQ=255)
                        gATGCGATTTATATCGCATAAGAGTGCAGTACTCATGCAGGATGCGGCATGAGTACCATATCCTTCCTGAAAATCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAAGCGACGCGCATCAGGCAATGTTACAAAAAAAGc                                                                                                                               >  1:6493431/1‑150 (MQ=255)
                         aTGCGATTTATATCGCATAAGAGTGCAGTACTCATGCCGGATGCGGCATGAGTACCATATCCTTCCTGAAAATCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGcc                                                                                                                              <  2:1109876/150‑1 (MQ=255)
                           gCGATTTATATCGCATAAGAGTGCAGTACTCATGCCGGATGCGGCATGAGTACCATATCCTTCCTGAAAATCGCGCAAATTCTCTATATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCAc                                                                                                                            <  2:363192/150‑1 (MQ=255)
                            cGATTGATATCGCATAAGAGTGCAGTACTCATGCCGGATGCGGCATGAGTACCATATCCTTCCTGAAAATCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACg                                                                                                                           <  2:3245349/150‑1 (MQ=255)
                             gATTTATATCGCATAAGAGTGCAGTACTCATGCCGGATGCGGCATGAGTACCATATCCTTCCTGAAAATCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAAGAGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACgg                                                                                                                          >  1:5710394/1‑150 (MQ=255)
                              aTTTATATCGCATAAGAGTGCAGTACTCATGCCGGATGCGGCATGAGTACCATATCCTTCCTGAAAATCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGt                                                                                                                         >  1:4832877/1‑150 (MQ=255)
                                  ttatCGCATATTTGTGCTTTAATCTTGGCGGATGCGTCTTTTGTACCATAACCTTCATTAAAATCGCGCAAATTCTTTATTTTGAAGTGATCTTGTAGGCCTGTTAAGCGAAGCTCCTCAGGCAATGTTACAAAAAAAGCCACGGTATaa                                                                                                                     <  1:5325421/149‑1 (MQ=255)
                                    atCGCATAAGAGTGCAGTACTCATGCCGGATGCGGCATGAGTACCATATCCTTCCTGAAAATCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAAc                                                                                                                   >  2:4666881/1‑150 (MQ=255)
                                       gCATAAGAGTGCAGTACTCATGCCGGATGCGGCATGAGTACCATATCCTTCCTGAAAATCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGt                                                                                                                <  2:5685753/150‑1 (MQ=255)
                                       gCATAAGAGTGCAGTACTCATGCCGGATGCGGCATGAGTACCATATCCTTCCTGAAAATCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGt                                                                                                                <  2:777951/150‑1 (MQ=255)
                                        cATAAGAGTGCAGTACTCATGCCGGATGCGGCATGAGTACCATATCCTTCCTGAAAATCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTg                                                                                                               <  2:6541933/150‑1 (MQ=255)
                                        cATAAGAGTGCAGTACTCATGCCGGATGCGGCATGAGTACCATATCCTTCCTGAAAATCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTg                                                                                                               >  2:2864742/1‑150 (MQ=255)
                                        cATAAGAGTGCAGTACTCATGCCGGATGCGGCATGAGTACCATATCCTTCCTGAAAATCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTg                                                                                                               <  2:2397914/150‑1 (MQ=255)
                                        aatatgtgTGCAGTACTCATGCGGGATGCGGATTGAGTACCATATCCTTCCTTAAAATCGCGAAATTTCTATATATTGCAGATATCTTGTAGGCCTTATAAGCGAAGCGAATCTGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTg                                                                                                               <  1:3978071/143‑1 (MQ=255)
                                         aTAAGAGTGCAGTACTCATGCCGTATGCGGCATTAGTACCATATCCTTCCTGAAAATCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCATGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTgg                                                                                                              <  2:648326/150‑1 (MQ=255)
                                         aTAAGAGTGCAGTACTCATGCCGGATGCGGCATGAGTACCATATCCTTCCTGAAAATCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTgg                                                                                                              <  2:6281652/150‑1 (MQ=255)
                                          tAAGAGTGCAGTACTCATGCCGGATGCGGCATGAGTACCATATCCTTCCTGAAAATCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACACTAAAAGCCACGGTATAAACCGTGGc                                                                                                             >  2:831179/1‑150 (MQ=255)
                                          tAAGAGTGCAGTACTCATGCCGGATGCGGCATGAGTACCATATCCTTCCTGAAAATCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTTTATACCGTGGc                                                                                                             <  2:1872079/150‑1 (MQ=255)
                                          tAAGAGTGCAGTACTCATGCCGGATGCGGCATGAGTACCATATCCTTCCTGAAAATCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGc                                                                                                             >  2:5169271/1‑150 (MQ=255)
                                           aaGAGTGCAGTACTCATGCCGGATGCGGCATGAGTACCATATCCTTCCTGAAAATCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCa                                                                                                            >  1:3812223/1‑150 (MQ=255)
                                                 gCAGTACTCATGCCGGATGCGGCATGAGTACCATATCCTTCCTGAAAATCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTTTATACCGTGGcttttttt                                                                                                      <  2:4840433/150‑8 (MQ=255)
                                                  tggTACTCATGCCGCATCCGGCATGAGTACCATATCCTTCCTGAAAATCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCACCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCAAAATCCa                                                                                                     >  2:1234698/3‑150 (MQ=255)
                                                  cAGTACTCATGCCGGATGCGGCATGAGTACCATATCCTTCCTGAAAATCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAAGCGACGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCAAAATCCa                                                                                                     >  2:1483724/1‑150 (MQ=255)
                                                  cAGTACTCATGCCGGATGCGGCATGAGTACCATATCCTTCCTGAAAATCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCAAAATCCa                                                                                                     >  1:4083539/1‑150 (MQ=255)
                                                           tGCCGGATGCGGCATGAGTACCATATCCTTCCTGAAAATCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCAAAATCCAACATAGCTa                                                                                            >  1:4638482/1‑150 (MQ=255)
                                                           tGCCGGATGCGGCATGAGTACCATATCCTTCATGAAAATCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCAAAATCCAACATAGCTa                                                                                            >  2:1974953/1‑150 (MQ=255)
                                                            gCCGGATGCGGCATGAGTACCATATCCTTCCTGAAAATCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCACAATCCAACATAGCTaa                                                                                           >  1:4564309/1‑150 (MQ=255)
                                                            gCCGGATGCGGCATGAGTACCATATCCTTCCTGAAAATCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCAAAATCCAACATAGCTaa                                                                                           >  1:4511529/1‑150 (MQ=255)
                                                              cgtaTGCGGCATGAGTACCATATCCTTCCTTAAAATCGCGCAAATTATATATATTGCATAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGAAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCAAAATCCAACATAGCTaaaa                                                                                         <  1:217620/147‑1 (MQ=39)
                                                              cGGATGCGGCATGAGTACCATATCCTTCCTGAAAATCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCAAAATCCAACCTAGCTaaaa                                                                                         >  1:5791431/1‑150 (MQ=255)
                                                              cGGATGCGGCATGAGTACCATATCCTTCCTGAAAATCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCAAAATCCAACATAGCTaaaa                                                                                         >  2:3851853/1‑150 (MQ=255)
                                                                gATGCGGCATGAGTACCATATCCTTCCTGAAAATCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAATCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCAATATCCAACATAGCTAAAaat                                                                                       >  2:7224496/1‑150 (MQ=255)
                                                                     ggCATGAGTACCATATCCTTCCTGAAAATCGCGCAAATACTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCAAAATCCAACATAGCTAAAAATAATCa                                                                                  >  2:5473035/1‑150 (MQ=255)
                                                                     ggCATGAGTACCATATCCTGCCTGACAATCTCGCAAATTCTATATAGTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCAAAATCCACCATAGCTAAAAATAATCa                                                                                  <  2:4163787/150‑1 (MQ=38)
                                                                     ggCATGAGTACCACATCCTTCCAGAAAATCGCGCAAATTCTATATATTCCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGTCAAAATCCAACATAGCTAAAAATAATCa                                                                                  <  2:456095/150‑1 (MQ=255)
                                                                      gCATGAGTACCATATCCTTCCTGAAAATCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCAAAATCCAACATAGCTAAAAATAATCAg                                                                                 <  1:6961156/150‑1 (MQ=255)
                                                                      gCATGAGTACCATATCCTTCCGGAAAATCGCGCAAATTCTATCTATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCACTGTTACAAAAAAAGCCACGGTATAAACCGTGGCACAATCCACCATAGCTAAAAATAATCAg                                                                                 >  2:1305103/1‑150 (MQ=38)
                                                                        aTGAGTACCATATCCTTCCTGAAAATCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTTTAAACCGTGGCAAAATCCAACATAGCTAAAAATAATCAGGc                                                                               <  2:4067617/150‑1 (MQ=255)
                                                                             tACCATATCCTTCCTGAAAATCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCAAAATCCAACATAGCTAAAAATAATCAGGCGAGTg                                                                          <  2:6612362/150‑1 (MQ=255)
                                                                                cATATCCTTCCTGAAAATCGCGCAAATACTATATATTGCAGAGATCATGTAGGCCTGATAATAGAATCGCAGCATGCACTGTTACAAAAAAAGCCACGTGATAAACCGTGGCAAAATCCAACATAGCGACAAAGAATCAGGCGAGTGGTa                                                                       >  1:5649347/1‑150 (MQ=255)
                                                                                   atCCTTCCTGAAAATCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCAAAATCCAACATAGCTAAAAATAATCAGGCGAGTGGTATGa                                                                    >  1:113019/1‑150 (MQ=255)
                                                                                    tccttcctGAAAATCGCGCAAATTATATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCTGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCAAAATCCAACATAGCTAAAAATAATCAGGCGAGTGGTATGAc                                                                   <  1:3109561/150‑1 (MQ=255)
                                                                                    tccttccaGAAAATCGCGCAAATTCTATATATTGCAGAGATCATGTAGCCCTCATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAATCCACGGTATAAACCGTGGCAAAATCCAACATAGCTAAAAATAATCAGGCGAGTGGTATGAc                                                                   <  2:2590576/150‑1 (MQ=255)
                                                                                      cttcctGAAACTCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCAAAATCCAACATAGCTAAAAATAATCAGGCGAGTGGTATGACtt                                                                 <  1:2551915/150‑1 (MQ=255)
                                                                                      cttcctGAAAATCGCGCAAATTCTATAGATGGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCAAAATCCAACATAGCTAAAAATAATCCGGCGAGTGGTATGACtt                                                                 <  2:4565938/150‑1 (MQ=255)
                                                                                       ttcctGAAAATCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCAAAATCCAACATAGCTAAAAATAATCAGGCGAGTGGTATGACTTa                                                                <  1:1538793/150‑1 (MQ=255)
                                                                                       ttcctGAAAATCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCAAAATCCAACATAGCTAAAAATAATCAGGCGAGTGGTATGACTTa                                                                <  1:1622658/150‑1 (MQ=255)
                                                                                          ctGAAAATCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCAAAATCCAACATAGCTAAAAATAATCAGGCGAGTGGTATGACTTAAAt                                                             >  1:4335384/1‑150 (MQ=255)
                                                                                             acaaTCGCGCAAATACTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCAACAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCAAAATCCAACATAGCTAAAAATAATCAGGCGAGTGGTATGACTTAAAtctc                                                          <  1:7170138/148‑1 (MQ=255)
                                                                                             aaaaTCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCAAAATCCAACATAGCTAAAAATAATCAGGCGAGTGGTATGACTTAAAtctc                                                          <  1:5116619/150‑1 (MQ=255)
                                                                                              aaaTCGCGCAAATTCTATATATTGCAGAGATCATGTCGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCAAAATCCAACATAGCTAAAAATAATCAGGCGAGTGGTATGACTTAAATctct                                                         <  2:638273/150‑1 (MQ=255)
                                                                                                aTCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCAAAATCCAACATAGCTAAAAATAATCAGGCGAGTGGTATGACTTAAATCTCTAc                                                       >  2:1690556/1‑150 (MQ=255)
                                                                                                 tCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCAAAATCCAACATAGCTAAAAATAATCAGGCGAGTGGTATGACTTAAATCTCTACg                                                      >  1:6715296/1‑150 (MQ=255)
                                                                                                    cgcAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCAAAATCCAACATAGCTAAAAATAATCAGGCGAGTGGTATGACTTAAATCTCTACGTcg                                                   <  1:1167739/150‑1 (MQ=255)
                                                                                                          ttCTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCAAAATCCAACATAGCTAAAAATAATCAGGCGAGTGGTATGACTTAAATCTCTACGTCGCGGTTa                                             <  1:4623423/150‑1 (MQ=255)
                                                                                                            cTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCAAAATCCAACATAGCTAAAAATAATCAGGCGAGTGGTATGACTTAAATCTCTACGTCGCGGTTACa                                           >  2:3288091/1‑150 (MQ=255)
                                                                                                                atatTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCAAAATCCAACATAGCTAAAAATAATCAGGCGAGTGGTATGACTTAAATCTCTACGTCGCGGTTACAATCt                                       <  2:3812223/150‑1 (MQ=255)
                                                                                                                 tatTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCAAAATCCAACATAGCTAAAAATAATCAGGCGAGTGGTATGACTTAAATCTCTACGTCGCGGTTACAATCtt                                      <  1:6638820/150‑1 (MQ=255)
                                                                                                                   ttGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCAAAATCCAACATAGCTAAAAATAATCAGGCGAGTGGTATGACTTAACTCTCTACGTCGCGGTTACAATCTTTc                                    <  2:5411059/150‑1 (MQ=255)
                                                                                                                   ttGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCAAAATCCAACATAGCTAAAAATAATCAGGCGAGTGGTATGACTTAAATCTCTACGTCGCGGTTACAATCTTTc                                    >  1:3333619/1‑150 (MQ=255)
                                                                                                                      cAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCAAAATCCAACATAGCTAAAAATAATCAGGCGAGTGGTATGACTTAAATCTCTACGTCGCGGTTACAATCTTTCGAg                                 >  1:4196975/1‑150 (MQ=255)
                                                                                                                       agagATCATGTAGGCCTGATAAGCGAAGCGCatcaggcctacatgatctctgcaatatatagaatttgcgcgattttcaggaaggatatggtactcatgccgcatccggcatgagtactgcactcttatgcgatataaaacgcatccgct                                <  2:4437207‑M2/150‑120 (MQ=255)
                                                                                                                       agagATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCAAAATCCAACATAGCTAAAAATAATCAGGCGAGTGGTATGACTTAAATCTCTACGTCGCGGTTACAATCTTTCGAGt                                >  2:6896150/1‑150 (MQ=255)
                                                                                                                          gaTCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCAAAATCCAACATAGCTAAAAATAATCAGGCGAGTGGTATGACTTAAATCTCTACGTCGCGGTTACAATCTTTCGAGTaaa                             <  2:1601711/150‑1 (MQ=255)
                                                                                                                           aTCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCAAAATCCAACATAGCTAAAAATAATCAGGCGAGTGGTATGACTTAAATCTCTACGTCGCGGTTACAATCTTTCGAGTAAat                            >  1:4499918/1‑150 (MQ=255)
                                                                                                                            tCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCAAAATCCAACATAGCTAAAAATAATCAGGCGAGTGGTATGACTTAAATCTCTACGTCGCGGTTACAATCTTTCGAGTAAata                           >  1:1930032/1‑150 (MQ=255)
                                                                                                                               tGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCAAAATCCAACATAGCTAAAAATAATCAGGCGAGTGGTATGACTTAAATCTCTACGTCGCGGTTACAATCTTTCGAGTAAATATAg                        <  1:5235451/150‑1 (MQ=255)
                                                                                                                               tGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCAAAATCCAACATAGCTAAAAATAATCAGGCGAGTGGTATGACTTAAATCTCTACGTCGCGGTTACAATCTTTCGAGTAAATATAg                        <  1:6163876/150‑1 (MQ=255)
                                                                                                                                 tAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTAGAAACCGTGGCACAATCCAACATAGCTAAAAATAATCAGGCGAGTGGTATGACTTAAATCTCTACGTCGCGGTTACAATCTTTCGAGTAAATATAGCt                      >  2:7120626/1‑150 (MQ=255)
                                                                                                                                   ggCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCAAAATCCAACATAGCTAAAAATAATCAGGCGAGTGGTATGACTTAAATCTCTACGTCGCGGTTACAATCTTTCGAGTAAATATAGCTGa                    <  1:2340250/150‑1 (MQ=255)
                                                                                                                                    gCCTGATAAGCGAAGCGCatcaggcctacatgatctctgcaatatatagaatttgcgcgattttcaggaaggatatggtactcatgccgcatccggcatgagtactgcactcttatgcgatataaatcgcatccgctttaaaggtaaggg                   <  2:2634707‑M2/150‑133 (MQ=255)
                                                                                                                                    gCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCAAAATCCAACATAGCTAAAAATAATCAGGCGAGTGGTATGACTTAAATCTCTACGTCGCGGTTACAATCTTTCGAGTAAATATAGCTGaa                   >  1:280968/1‑150 (MQ=255)
                                                                                                                                      cTGATAAGCGAAGCGCatcaggcctacatgatctctgcaatatatagaatttgcgcgattttcaggaaggatatggtactcatgccgcatccggcatgagtactgcactcttatgcgatataaatcgcatccgctttaaaggtaagggtt                 <  2:3112529‑M2/150‑135 (MQ=255)
                                                                                                                                      cTGATAAGCGAAGCGCatcaggcctacatgatctctgcaatatatagaatttgcgcgattttcaggaaggatatggtactcatgccgcatccggcatgagtactgcactcttatgcgatataaatcgcatccgctttaaaggtaagggtt                 <  2:6695062‑M2/150‑135 (MQ=255)
                                                                                                                                        gATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCAAAATCCAACATAGCTAAAAATAATCAGGCGAGTGGTATGACTTAAATCTCTACGTCGCGGTTACAATCTTTCGAGTAAATATAGCTGAACGCt               >  2:2698359/1‑150 (MQ=255)
                                                                                                                                         aTAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCAAAATCCAACATAGCTAAAAATAATCAGGCGAGTGGTATGACTTAAATCTCTACGTCGCGGTTACAATCTTTCGAGTAAATATAGCTGAACGCtt              >  1:6265395/1‑150 (MQ=255)
                                                                                                                                          tAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCAAAATCCACCATAGCTAAAATTTATCAGGCGAGTGGTATGACTTAAATCTCTACGTCGCGGTTACAATCTTTCGAGTAAATATAGCTGAACGCTTc             <  1:1274796/150‑1 (MQ=255)
                                                                                                                                              cgaagcgCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCAAAATCCAACATAGCTAAAAATAATCAGGCGAGTGGTATGACTTAAATCTCTACGTCGCGGTTACAATCTTTCGAGTAAATATAGCTGAACGCTTcacca         >  2:2179053/1‑150 (MQ=255)
                                                                                                                                              cgaagcgCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCAAAATCCAACATAGCTAAAAATAATCAGGCGAGTGGTATGACTTAAATCTCTACGTCGCGGTTACAATCTTTCGAGTAAATATAGCTGAACGCTTcacca         >  1:2994192/1‑150 (MQ=255)
                                                                                                                                               gaagcgCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCGAAATCCAACATAGCTAAAAATAATCAGGCGAGTGGTATGACTTAAATCTCTACGTCGCGGTTACAATCTTTCGAGTAAATATAGCTGAACGCTTcaccac        >  2:4954835/1‑150 (MQ=255)
                                                                                                                                               gaagcgCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCAAAATCCAACATAGCTAAAAATAATCAGGCGAGTGGTATGACTTAAATCTCTACGTCGCGGTTACAATCTTTCGAGTAAATATAGCTGAACGCTTcaccac        >  2:6748364/1‑150 (MQ=255)
                                                                                                                                                 agcgCATCAGGCAATGTTACACAAAAAGCCACGGTATAAACCGTGGCAAAATCCAACATAGCTAAACATAATCAGGCGAGTGGTATGACTTAAATCTCTACGTCGCGGTTACAATCTTTCGAGTAAATATAGCTGAACGCTTCACCACGc      <  2:1680243/150‑1 (MQ=255)
                                                                                                                                                     cATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCAAAATCCAACATAGCTAACAATAATCAGGCGAGTGGTATGACTTAAATCTCTACGTCGCGGTTACAATCTTTCGAGTAAATATAGCTGAACGCTTCACCACGCCCTa  <  2:1045297/150‑1 (MQ=255)
                                                                                                                                                     cATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCAAAATCCAACATAGCTAAAAATAATCAGGCGAGTGGTATGACTTAAATCTCTACGTCGCGGTTACAATCTTTCGAGTAAATATAGCTGAACGCTTCACCACGCCCTa  <  1:265799/150‑1 (MQ=255)
                                                                                                                                                     cATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCAAAATCCAACATAGCTAAAAATAATCAGGCGAGTGGTATGACTTAAATCTCTACGTCGCGGTTACAATCTTTCGAGTAAATATAGCTGAACGCTTCACCACGCCCTa  >  2:349897/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
AAACTAACCCTTACCTTTAAAGCGGATGCGATTTATATCGCATAAGAGTGCAGTACTCATGCCGGATGCGGCATGAGTACCATATCCTTCCTGAAAATCGCGCAAATTCTATATATTGCAGAGATCATGTAGGCCTGATAAGCGAAGCGCATCAGGCAATGTTACAAAAAAAGCCACGGTATAAACCGTGGCAAAATCCAACATAGCTAAAAATAATCAGGCGAGTGGTATGACTTAAATCTCTACGTCGCGGTTACAATCTTTCGAGTAAATATAGCTGAACGCTTCACCACGCCCTA  >  NC_000913/543027‑543325

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.