| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,504,880 | A→C | 5.5% | intergenic (+97/+55) | frlR → / ← yhfS | putative DNA‑binding transcriptional regulator/FNR‑regulated pyridoxal phosphate‑dependent aminotransferase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,504,880 | 0 | A | C | 5.5% | 890.2 / 5.1 | 307 | intergenic (+97/+55) | frlR/yhfS | putative DNA‑binding transcriptional regulator/FNR‑regulated pyridoxal phosphate‑dependent aminotransferase family protein |
| Reads supporting (aligned to +/- strand): ref base A (115/158); new base C (19/4); total (137/170) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.73e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 320 total aligned reads displayed.
TCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTG > NC_000913/3504731‑3505029 | cttctGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTGACCACACCCAAAACCAAACCCCaa > 1:3097307/1‑150 (MQ=38) cttctGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCaa < 1:4227767/150‑1 (MQ=255) ccGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCAAACCCACACCCCAAAGGGGc > 2:466035/1‑150 (MQ=255) gcgcCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGa < 1:5534449/150‑1 (MQ=255) gcCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAACGGGGCGAgg < 1:3627101/150‑1 (MQ=255) gcCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAgg < 1:4636423/150‑1 (MQ=255) ccAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCGCCCCTTTGGGGAGAggg < 1:7223597/150‑1 (MQ=39) cAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTGCCCACACCCAAAACCACTACCCCAAGGGGGGAgggg > 1:4974904/1‑150 (MQ=38) aaTCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGa < 2:1286599/150‑1 (MQ=255) tCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑cc < 2:4570511/150‑1 (MQ=255) tCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCCCACCCGAAACCACAACCCAAAAGGGCCAGGGGc‑cc > 2:4961078/1‑150 (MQ=38) aTCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTc < 1:5439652/150‑1 (MQ=255) ccTTAACTATTGATAATAAAAGACATTACCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTa < 2:4628358/150‑1 (MQ=255) ccTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTa < 1:5659219/150‑1 (MQ=255) ccTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTa > 2:5886799/1‑150 (MQ=255) ttAACTATTGATAATACAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTGCCCCGGACCCTTACCCCCTCCCCAAAGGGGCGGGGGGC‑CCGTTCCGGACg > 2:5059547/1‑150 (MQ=38) ttAACTATTGATAATAAAAGACATTAACCGTAGTCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTTCCCGCACACAAAAACCCACCCCCAACGGGCGAGGGGA‑CAGCTCATTAcc > 2:2481416/1‑149 (MQ=37) ttAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTACCCACACCCAAACCCACACCCCAAAGGGGCGAGGGGG‑CCGGTAAGTACg > 2:6687863/1‑150 (MQ=38) aaCTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTAAATCCCGTACGTTACCCACACCCAAACCCACACCCCAAACGGGGGCGGGGG‑CCGGTCAGTAAGGa > 1:3414453/1‑150 (MQ=37) aCTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGaa < 1:6936707/150‑1 (MQ=255) tATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTGCCCACACCCGAACCCACAACCCAAAGGGGCGAGGGGG‑CCGGTAAGTAAgggaat > 1:5770614/1‑146 (MQ=37) tATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAAtt < 1:4560154/150‑1 (MQ=255) ttGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CTGTTCAGTACGGAATTTa < 1:5039704/150‑1 (MQ=255) ttGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTa < 2:5537982/150‑1 (MQ=255) ttGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTa < 1:2747703/150‑1 (MQ=255) ttGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTa < 2:6126097/150‑1 (MQ=255) ttGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTa < 2:1221020/150‑1 (MQ=255) ttGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCACACCCAAACCCACTCCCCCAAGGGGCGAGGGGC‑CCGTTCAGTTCGGGATTTa > 1:7175792/1‑150 (MQ=38) ttGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCAAACCCAAACCCACAACCCCAACGGGCGCGGGGA‑CCGGTCAGTAAGGCATTTa > 1:3483017/1‑150 (MQ=37) ttGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCCATGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CTGTTCAGTACGGAATTTa < 1:5987566/150‑1 (MQ=255) ataataAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTGCCCCCACCCAAACCCACTCCCCCAACGGGCGAGGGGG‑CCCGTCAGTACGGCATTTATCt > 1:3806155/1‑150 (MQ=37) aaaaGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACg < 1:6750616/150‑1 (MQ=255) aaaGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACgg < 1:1735675/150‑1 (MQ=255) aaGACCTTAACCGTAGGCCGGCTAAGATGCGCCAGCATCGCATCCGGCGATGCTCGCGCGTTGAATTGTACATCCCGTACGGTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGt < 2:3962773/150‑1 (MQ=39) aGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTg < 1:6194102/150‑1 (MQ=255) aGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCAAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGGTCAGTACGGAATTTAGCTTGACGGTg > 2:6020155/1‑150 (MQ=255) ttAACCGTAGGCCGGATAAGATGCGCCACCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACAACCCGTACGTTGCCCTCCCCCTAACCCACTCCCCCCAGGGGCGAGGGGC‑CCCGTCAGGACCGCAGTTAGCGTGCCGGGGCtctc > 2:4280666/1‑150 (MQ=25) tAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATcc < 1:4944121/150‑1 (MQ=255) tAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGGTCCCCACACCCAAACCCACAACCCCAACGGGCGGGGGGACCCGTACGTAACGGAA‑TTAGCATTGCGGTGCTAtac > 1:4786795/1‑148 (MQ=19) aCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAg < 2:3436312/150‑1 (MQ=255) aGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCGAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTa < 2:6236711/150‑1 (MQ=255) gCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCCAACCCACAACCCCAAGGGGCGGGGGGA‑CCGGTCAGTGAGGAATTTTGCGTTAACGTGCTATACAggcataaa > 2:5557593/1‑143 (MQ=255) gCCGGATAAGATGCGCCAGCATCGCATCCGGCGATCCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTaaa < 2:1898422/150‑1 (MQ=255) ggATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATAc < 2:5036601/150‑1 (MQ=255) gATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACt < 1:6356852/150‑1 (MQ=255) aTAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCACAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTg < 1:1640660/150‑1 (MQ=255) aTAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTg < 1:61683/150‑1 (MQ=255) tAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGACTTTTACATCCCGTACGTTCCCCTCACCCTACCCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTgg < 1:1367709/150‑1 (MQ=255) tAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTgg < 1:6100861/150‑1 (MQ=255) tAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTgg < 1:485901/150‑1 (MQ=255) tAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTgg < 1:3510358/150‑1 (MQ=255) tAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTgg < 2:1384859/150‑1 (MQ=255) tAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTgg < 2:1912830/150‑1 (MQ=255) tAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTGTACATCCCGTACGGTCCCCTCACCCTAACCCGCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTgg < 2:2320487/150‑1 (MQ=255) ttccatcgcCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGc < 2:6861332/144‑1 (MQ=255) gATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTACCCAAACCCTAAAACACAACCCAAAAGGGCGAGGGGG‑CCGTTAAGTACCGAATTTAGCTTGGAGGTTCTATAAAGCATTAAAAACAGGCaa > 2:6210415/1‑150 (MQ=255) tGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATa < 1:701671/150‑1 (MQ=255) gcCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATActc < 2:220490/150‑1 (MQ=255) atcgcatcCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCGCACCCGAACCCTCTCCCCACAGGGGCGAGGGGA‑CCGGTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCACTACTCTCACGc > 2:884745/1‑150 (MQ=255) ccGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATcc < 1:4671044/150‑1 (MQ=255) ggCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCgc > 2:4823404/1‑150 (MQ=255) ggCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTGAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCgc < 1:15930/150‑1 (MQ=255) tGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCAc < 2:200585/150‑1 (MQ=255) gCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCAcc < 1:229623/150‑1 (MQ=255) gcgcGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGtct < 2:5702520/150‑1 (MQ=255) cgcgTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAACGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGtctc < 2:2993867/150‑1 (MQ=255) aaTTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCg < 2:814764/150‑1 (MQ=255) ttttACATCCCGTACGTTCCCCTCACCCAAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACCGAAATTAGCTTGACCGTGCTAACCAGCATTAAAAACTGGCAATACACTCACGCAAAATCCGCACCACCCTCACATCAccccg > 2:5287672/1‑147 (MQ=37) tttACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTg < 2:3501812/150‑1 (MQ=255) ccGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCgg < 2:6515076/150‑1 (MQ=255) gTACGGTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGt < 1:930421/150‑1 (MQ=255) ttCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATg < 2:6502071/150‑1 (MQ=255) tCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGc < 2:1616055/150‑1 (MQ=255) ccccTCACCCTAACCCTCTCCCCAACGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCCCGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCg < 2:5619397/150‑1 (MQ=255) cccTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGa < 2:2915609/150‑1 (MQ=255) ccTCACCCTAACCCTCTCCCCCACGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGaa < 1:6020155/150‑1 (MQ=255) ccTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGaa < 1:6605962/150‑1 (MQ=255) ccTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGaa > 1:3570648/1‑150 (MQ=255) ccTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGaa > 1:3738202/1‑150 (MQ=255) cTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGGAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAAt > 1:2399131/1‑150 (MQ=255) ccccTAACCCTCTCCCCAACGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGc < 1:6741913/149‑1 (MQ=255) accctcaccctcTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCGCGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGc < 1:840600/150‑1 (MQ=255) cccTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGca < 2:642019/150‑1 (MQ=255) cccTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGCATTAACCCGAATCGca < 1:868553/150‑1 (MQ=255) ccTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGcac > 2:4424079/1‑150 (MQ=255) cTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGcaca > 1:108884/1‑150 (MQ=255) tAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACaa > 1:3865273/1‑150 (MQ=255) tAACCCTCACCCAAAAGGGGCGAGCCGA‑CAGTTCATTACGGAATTTAGCTTGACGGAGCTATCCAGCATAAAAAACAGGCAATACTCTCACGCAAAAACCGCAGCACCTTCACTTCACCGCTGCGATACGGGTAAAACCGAATCGCACaa > 2:5431972/1‑150 (MQ=255) tccccTCGCCCCTTTGGGGAGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAAt > 2:7090274/3‑150 (MQ=255) aaCCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAAt < 2:3260191/150‑1 (MQ=255) cccTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGt > 1:4096977/1‑150 (MQ=255) cccTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGt > 2:3353881/1‑150 (MQ=255) ccTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGtt < 1:4418404/150‑1 (MQ=255) ctctCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTc < 1:6643924/150‑1 (MQ=255) tctcCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGGTAATGCGAATCGCACAATGTTCt > 2:2343113/1‑150 (MQ=255) tcCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGATGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGa > 1:2926786/1‑150 (MQ=255) cccAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGAtt > 2:5969733/1‑150 (MQ=255) cccAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGAtt > 2:4730037/1‑150 (MQ=255) ccAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATtg > 1:5240724/1‑150 (MQ=255) aaaGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATtgtg > 2:2080368/1‑150 (MQ=255) | TCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTG > NC_000913/3504731‑3505029 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |