Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,239,609 T→G 6.4% intergenic (+64/‑335) alx → / → sstT putative membrane‑bound redox modulator/sodium:serine/threonine symporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,239,6090TG 6.4% 882.3 / 25.4 312intergenic (+64/‑335)alx/sstTputative membrane‑bound redox modulator/sodium:serine/threonine symporter
Reads supporting (aligned to +/- strand):  ref base T (181/85);  new base G (4/16);  total (185/127)
Fisher's exact test for biased strand distribution p-value = 3.03e-05
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 315 total aligned reads displayed.

GGGCGTGGTGTTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTGGCTTTAT  >  NC_000913/3239461‑3239757
                                                                                                                                                     |                                                                                                                                                    
   cGTGGTGTTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAg                                                                                                                                                  <  2:6679042/150‑1 (MQ=255)
    gtggtgTTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAgg                                                                                                                                                 <  1:7003462/150‑1 (MQ=255)
     tggtgTTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAggg                                                                                                                                                >  1:3280339/1‑150 (MQ=255)
      ggtgTTTGGCTTTCTGGTTATGAGGTTTATTATAAACGCCTGGGTGAATTATCGGCATGATAAGAAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGga                                                                                                                                               <  2:3069942/150‑1 (MQ=255)
      ggtgTTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGga                                                                                                                                               <  1:4555222/150‑1 (MQ=255)
      ggtgTTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGga                                                                                                                                               <  1:5687772/150‑1 (MQ=255)
      ggtgTTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGga                                                                                                                                               <  1:2076327/150‑1 (MQ=255)
       gtgtTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGgag                                                                                                                                              <  2:4374252/150‑1 (MQ=255)
       gtgtTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGgag                                                                                                                                              >  1:1508045/1‑150 (MQ=255)
       gtgtTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGgag                                                                                                                                              <  2:3724049/150‑1 (MQ=255)
        tgtTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGgaga                                                                                                                                             <  1:1261671/150‑1 (MQ=255)
        tgtTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTGGAAGGgaga                                                                                                                                             <  2:7203936/150‑1 (MQ=255)
         gtTTGTCATTCTGGTGATGACGTTTATTCTCAACGCCTGGGTGACTTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTTAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGagag                                                                                                                                            <  2:5047013/150‑1 (MQ=255)
         gtTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGAAAAGCAGCGGGGAGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGagag                                                                                                                                            >  2:4572938/1‑150 (MQ=255)
          tttGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAgg                                                                                                                                           >  1:3587624/1‑150 (MQ=255)
          tttGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAgg                                                                                                                                           <  1:3019411/150‑1 (MQ=255)
          tttGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTGGAAGGGAGAgg                                                                                                                                           <  1:1383415/150‑1 (MQ=255)
            tGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGt                                                                                                                                         >  2:5385384/1‑150 (MQ=255)
              gCATTCTGGTGATGACGATTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCTGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCg                                                                                                                                       <  2:3833719/150‑1 (MQ=255)
                 ttCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCgggg                                                                                                                                    >  1:7154857/1‑150 (MQ=255)
                 ttCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCgggg                                                                                                                                    >  2:3566890/1‑150 (MQ=255)
                    tGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGa                                                                                                                                 <  2:5640810/150‑1 (MQ=255)
                    tGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGa                                                                                                                                 >  1:6430060/1‑150 (MQ=255)
                    tGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGa                                                                                                                                 >  1:6608951/1‑150 (MQ=255)
                    tGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGa                                                                                                                                 <  2:485872/150‑1 (MQ=255)
                     ggTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAg                                                                                                                                >  1:5649991/1‑150 (MQ=255)
                     ggTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAg                                                                                                                                >  1:2446932/1‑150 (MQ=255)
                      gTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAgg                                                                                                                               <  2:6195779/150‑1 (MQ=255)
                        gatgaCGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGt                                                                                                                             >  2:5277591/1‑150 (MQ=255)
                              gTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCCGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAAtttt                                                                                                                       >  2:6459144/1‑150 (MQ=255)
                              gTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAAtttt                                                                                                                       >  2:2870621/1‑150 (MQ=255)
                              gTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAAtttt                                                                                                                       >  2:2578472/1‑150 (MQ=255)
                               tttATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAAttttt                                                                                                                      >  2:1914595/1‑150 (MQ=255)
                                ttattaTCAACGCCTGGGTGAATTATCGGCATGATAAGCAGGGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGTGGGTCGGGGTGAGGGTAATTTTTc                                                                                                                     <  2:1807471/150‑1 (MQ=255)
                                 tattatCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCg                                                                                                                    >  1:1993002/1‑150 (MQ=255)
                                   ttatCATCGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCa                                                                                                                  >  2:3041351/1‑150 (MQ=255)
                                    tatCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCAc                                                                                                                 >  1:585201/1‑150 (MQ=255)
                                    tatCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCAc                                                                                                                 >  2:3140552/1‑150 (MQ=255)
                                      tCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCg                                                                                                               >  1:4977041/1‑150 (MQ=255)
                                       cAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGTGGGTCGGGGTGAGGGTAATTTTTCGCACCGa                                                                                                              >  2:5941691/1‑150 (MQ=255)
                                           gcgtGGGTTAATTAGGGGCATTATAAGCTGGGGGGTGGATATTTTTTAATCTGCCTACGCCGGGTACCCTTTCTTTAACTTGAGCACCTTTTT‑CTCCCTCTCCCTTCCCGGGAGTGGGTGGGGGTGTGGGTAATTTTTCGCACCGATGCt                                                                                                          <  2:6906112/147‑1 (MQ=255)
                                                 gTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTg                                                                                                    >  1:1137424/1‑150 (MQ=255)
                                                 gTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTg                                                                                                    >  2:2761072/1‑150 (MQ=255)
                                                    atttATCGGAATGATACGCTGGGGGGTGTATATTTTTTAATCTGCCTAAGCCGTGTACCGTGTCATTAACATGCGCACCTTTTT‑CTCCCTCTCCCTCCCCGGGTGCGGGTCGGGGTGTGGTTAATTTTTCGCACCGATGCTGGCCTGTTc                                                                                                 <  2:6297951/148‑1 (MQ=255)
                                                      ttAGCGGCTTGTTACGCGGGGGGGTGTATATTTTTTACCCGGCCTAAGCCGTTCACCGTTTAATTAACTTGAGC‑CCGTTTTCCCCCCTCTCCCTCCCTGGGTGTGGGTGGGGGGGCGGGAAATTTTTCGCACCGATGCTGGCCTGTTccc                                                                                               <  2:1508045/150‑1 (MQ=255)
                                                      ttAGCGGCCTGATACGCCGGGGGGTGTATATTTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACTTGCGCCCCTTTTT‑CTCCCCCCCCCTCCCGGGGAGTGGGTGGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTccc                                                                                               <  2:131695/150‑1 (MQ=255)
                                                       tATCGGCATTATACGCTGGGGGGTTTATATTTTTTATTCTGCCTAAGCCGTTTACCGTGAATTTAACTTGAGCACGTTTTT‑CACCCACACCCTACCAGGTAGAGGGTGGGGTTGTGGTTAATTTTTCGCACCGATGCTGGCCTGTTcccc                                                                                              <  2:115976/150‑1 (MQ=255)
                                                           ggCTTGATACGCTGCGGGGTGTATATTTTTAAATCTGCATACGGCGGGCACCCTTTATTTACCTTGCGCCCCTTTTG‑CTCCCTCTCCCTCCCGGGTTGTGGGGGGGGTTGTGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCAc                                                                                          <  2:3402116/150‑1 (MQ=255)
                                                            gctttaTAAGCTGGGGGGTTTATATTTTTTAATCTGCATACGCCTTTTACCCTGTCATTAAATTGAGCACGTTTTT‑CTCCCTCTCCCTTCCCGGGTTTGGGTGGGGGTGTGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCAcc                                                                                         <  2:2308736/145‑1 (MQ=255)
                                                            gCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCAcc                                                                                         >  1:942460/1‑150 (MQ=255)
                                                              aTGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCt                                                                                       >  2:1537184/1‑150 (MQ=255)
                                                               tGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTa                                                                                      >  2:3428973/1‑150 (MQ=255)
                                                                taTAAGCTGGGGGGTGTATAATTTTTAATCGGCAAACGCCTTGTACCCTGTAATTAACTTGAGCACGTTTTT‑CTCCCTCACCCTTCCTGGGTGTGGGTGGGGGTGTGGTTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTaa                                                                                     <  2:3506759/149‑1 (MQ=19)
                                                                         cGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTccc                                                                            >  2:3873524/1‑150 (MQ=255)
                                                                                 aTAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGTTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACggg                                                                    <  2:1722930/150‑1 (MQ=255)
                                                                                       tttAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGGTGGGCTGTTCCCCTCACGCTAACCCTCTCGCCAAACGGGGCGTgg                                                              >  2:5846823/1‑150 (MQ=255)
                                                                                        ttAATCTGCCTAAGCGGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAggg                                                             <  2:4209125/150‑1 (MQ=255)
                                                                                            tCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACt                                                         >  1:3938415/1‑150 (MQ=255)
                                                                                             cTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTg                                                        >  1:129720/1‑150 (MQ=255)
                                                                                              tGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGa                                                       >  2:4713265/1‑150 (MQ=255)
                                                                                              tGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGa                                                       >  2:6049145/1‑150 (MQ=255)
                                                                                                ccTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGAcc                                                     >  2:3616065/1‑150 (MQ=255)
                                                                                                ccTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGAcc                                                     >  2:3616083/1‑150 (MQ=255)
                                                                                                      ccGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTcc                                               >  2:74451/1‑150 (MQ=255)
                                                                                                      ccGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTcc                                               >  1:1703938/1‑150 (MQ=255)
                                                                                                         tgtACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCGGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCttg                                            >  1:544171/1‑149 (MQ=255)
                                                                                                           tccccTGTAATTAACATGAGCACCGTTTT‑CGCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCttttt                                          <  1:5271955/148‑1 (MQ=255)
                                                                                                            ccccTGCCATTAACATGAGCACCGTTTG‑CCCCCCCCCCCTGCCTGGGCGCGGGTGGGGGTGCGGGTCATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCtttttt                                         <  1:2864340/149‑1 (MQ=25)
                                                                                                              cgtgaatttAACTTGAGCACGGTTAT‑CCCCCTCCCCCTCCCGGGGTGTGGTGGGGGGTGGGGGAAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGa                                       <  2:3308736/143‑1 (MQ=21)
                                                                                                              ccTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTgc                                       >  2:1851983/1‑149 (MQ=255)
                                                                                                              ccTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGa                                       >  1:4623283/1‑150 (MQ=255)
                                                                                                               ctttCATTAACCTGCGCACCTTTTC‑CGCCCGCCCCCGTCCGGGGTGTGGGGGGGGGTGTGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGAt                                      <  1:2202094/147‑1 (MQ=21)
                                                                                                               cTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGAt                                      >  1:2919755/1‑150 (MQ=255)
                                                                                                               cTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGCGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGAt                                      <  1:4035639/150‑1 (MQ=255)
                                                                                                                  tCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGAtgtt                                   >  1:6501767/1‑150 (MQ=255)
                                                                                                                   cATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGTGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGAtgttg                                  <  2:1118708/150‑1 (MQ=255)
                                                                                                                    tttAACTTGCGCACGTTTTT‑CTCCCTCTCCCTCCCCGGGTGTGGGTGGGGGTGTGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGAtgttgt                                 <  1:3730574/149‑1 (MQ=25)
                                                                                                                    aTTAACTTGACCCCCGTTTT‑CCCCCACCCCCTACCGGGGTGTGGGTGGGGGTTTGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGAtgttgt                                 <  1:635761/150‑1 (MQ=21)
                                                                                                                      tAACATGAGCACGTTTTC‑CCCCCTCGCGCTTCCGGGTTGGGGGGGGGGGTGTGGGAAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGtca                               <  1:346799/150‑1 (MQ=21)
                                                                                                                         cATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAAACCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGtcatca                            >  2:291093/1‑150 (MQ=255)
                                                                                                                          aTGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAg                           >  1:4303569/1‑150 (MQ=255)
                                                                                                                             aGCACCGTTTT‑CTCCCTCTCCCTTCCCGTTTGTGGTTGGGGGTTTGGTTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCt                        <  1:2956403/150‑1 (MQ=37)
                                                                                                                             aGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCGGTTTTGTTGTTGTCATCAGTCt                        >  1:6735925/1‑150 (MQ=255)
                                                                                                                                aCCGTTTT‑CTCCCTCTCCCGTCCCGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGa                     <  2:6517702/150‑1 (MQ=255)
                                                                                                                                 cggTTTC‑CGCCCCCGCCCTTCCGGGGTGTGGGTGGGGGTGTGGTTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGaa                    <  2:5717725/148‑1 (MQ=25)
                                                                                                                                   gTTTT‑CCCCCTCTCCCTCCCGGGGTGTGGGTGGGGGTGTGGGAAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGc                  <  1:2627849/150‑1 (MQ=25)
                                                                                                                                    tttt‑CTCCCTCTCCCATCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCGCACCCAAACCCACACCCCAAACGGGGCGAGGGGACTGACCCAGTCCATTTTTTATGTTGTAAACAGTCTGGAAGcc                 >  1:605113/1‑150 (MQ=255)
                                                                                                                                         ctccctctccctTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCAc             >  2:4762205/1‑150 (MQ=255)
                                                                                                                                          tccctctccctTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACg            >  2:1648350/1‑150 (MQ=255)
                                                                                                                                          tccctctccctTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACg            >  1:783006/1‑150 (MQ=255)
                                                                                                                                             ctctccctTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTg         >  2:6999854/1‑150 (MQ=255)
                                                                                                                                              tctccctTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTgg        >  1:101055/1‑150 (MQ=255)
                                                                                                                                              tctccctTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTgg        <  2:7146353/150‑1 (MQ=255)
                                                                                                                                              tctccctTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTgg        >  1:4158085/1‑150 (MQ=255)
                                                                                                                                              tctccctTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTgg        >  1:6010799/1‑150 (MQ=255)
                                                                                                                                              tcgccctTCCAGGGAGCGGGTCGGGGTGTGGTTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTgg        <  2:1718164/147‑1 (MQ=255)
                                                                                                                                                tccctTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGTCCGAGTCCTTTTTTGGTGTTGTCATAAGTGTGGAAGCCGCCCGTTGGCt      >  2:5457667/1‑150 (MQ=25)
                                                                                                                                                  cctTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCGTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTGGCttt    >  1:6261101/1‑150 (MQ=255)
                                                                                                                                                  cctTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCGGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACGGTCCGAGTCCTTGTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTGGCtgt    >  2:4354509/1‑148 (MQ=255)
                                                                                                                                                    ttCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCCCACGGGGCGAGGGGACTGACCGAGTCCTTGGTTGCTGGTGGCAGCAGTCTGGCAGCCGCACGGGGGCtggag  >  2:4008385/1‑146 (MQ=21)
                                                                                                                                                     |                                                                                                                                                    
GGGCGTGGTGTTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTGGCTTTAT  >  NC_000913/3239461‑3239757

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑