Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,470,107 G→T 5.1% intergenic (‑254/+38) chiA ← / ← tufA periplasmic endochitinase/translation elongation factor EF‑Tu 1

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,470,1070GT 5.1% 1532.1 / 47.2 418intergenic (‑254/+38)chiA/tufAperiplasmic endochitinase/translation elongation factor EF‑Tu 1
Reads supporting (aligned to +/- strand):  ref base G (202/194);  new base T (7/15);  total (209/209)
Fisher's exact test for biased strand distribution p-value = 1.23e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 423 total aligned reads displayed.

TAAGAAAAAAGCCTGACAAATGAAGCATTTTAAAAACAGAAACATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCATCGCGATCGGGTGGATCAGGGTAACAACCATT  >  NC_000913/3469958‑3470256
                                                                                                                                                     |                                                                                                                                                      
tAAGAAAAAAGCCTGACAAATGAAGCATTTTAAAAACAGAAACATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCg                                                                                                                                                        >  2:660906/1‑150 (MQ=255)
  aGAAAAAAGCCTGACACATGAAGCATTTTAAAAACAGAAACATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGaa                                                                                                                                                      <  1:6316270/150‑1 (MQ=255)
    aaaaaaGCCTGACAAATGAAGCATTTTAAAAACAGAAACATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAgc                                                                                                                                                    >  1:5034068/1‑150 (MQ=255)
      aaaaGCCTGACAAATGAAGCATTTTAAAAACAGAAACATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAgcgc                                                                                                                                                  <  2:841069/150‑1 (MQ=255)
       aaaGCCTGACAAATGAAGCATTTTAAAAACAGAAAAATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGcc                                                                                                                                                 <  2:5863387/150‑1 (MQ=255)
          gCCTGACAAATGAAGCATTTTAAAAACAGAAACATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCtt                                                                                                                                              >  1:2636685/1‑150 (MQ=255)
           ccTGACAAATGAAGCATTTTAAAAACAGAAACATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCttt                                                                                                                                             <  2:3110646/150‑1 (MQ=255)
           ccTGACAAATGAAGCATTTTAAAAACAGAAACATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCttt                                                                                                                                             >  1:3098290/1‑150 (MQ=255)
           ccTGACAAATGAAGCATTTTAAAAACAGAAACATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCttt                                                                                                                                             >  2:5408397/1‑150 (MQ=255)
            cggACAAATGAAGCATTTTAAAAACAGAAACATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCTTCGGCGCCCtttt                                                                                                                                            <  2:1613342/148‑1 (MQ=255)
            cTGACAAATGAAGCATTTTAAAAACAGAAACATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCtttt                                                                                                                                            <  2:3775277/150‑1 (MQ=255)
             ggACAAATGAAGCATTTTAAAAACAGAAACATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCTTCGGCGCCCttttt                                                                                                                                           <  2:6288189/149‑2 (MQ=255)
             agACAAAACAACCATTTTAAAAACAGAAACATACATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCATCGGCGCCCttttt                                                                                                                                           <  2:1075561/149‑2 (MQ=255)
                cAAATGACGCATTTTAAAAACAGAAACATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCGAAAAGGGCGCTTCGGCGCCCtttttgca                                                                                                                                        <  1:2814710/150‑5 (MQ=255)
                 aaaTGAAGCATTTTAAAAACAGAAACATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTttcaatt                                                                                                                                       >  2:4455911/1‑150 (MQ=255)
                  aaTGAAGCATTTTAAAAACAGAAACATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTttcaattc                                                                                                                                      >  2:7144921/1‑150 (MQ=255)
                   aTGAAGCATTTTAAAAACAGAAACATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCGAAAAGGGCGCTTCGGCGCCCtttttgcattt                                                                                                                                     <  2:170383/150‑8 (MQ=255)
                      aaGCATTTTAAAAACAGAAACATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCaaaa                                                                                                                                  <  2:6564337/150‑1 (MQ=255)
                         cATTTTAAAAACAGAAACATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTa                                                                                                                               >  1:2447541/1‑150 (MQ=255)
                         cATTTTAAAAACAGAAACATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTa                                                                                                                               >  1:2297715/1‑150 (MQ=255)
                                 aaaCAGAAACATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCATAACTAATTA‑ACgt                                                                                                                      <  2:3597818/150‑1 (MQ=255)
                                 aaaCAGAAACATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACgt                                                                                                                      >  2:3737046/1‑150 (MQ=255)
                                 aaaCAGAAACATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACgt                                                                                                                      <  1:6409200/150‑1 (MQ=255)
                                   aCAGAAACATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAATGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACgtgt                                                                                                                    >  1:5586230/1‑150 (MQ=255)
                                   aCAGAAACATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACgtgt                                                                                                                    >  1:2958288/1‑150 (MQ=255)
                                   aCAGAAACATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACgtgt                                                                                                                    <  1:1286020/150‑1 (MQ=255)
                                     aGAAACATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCATCAAATGCTAAATGGGCGCCGAAGCGCCCTTTTCAATTCATAACTAATTA‑TCGTGTaa                                                                                                                  >  2:5259698/1‑150 (MQ=255)
                                     aGAAACATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTaa                                                                                                                  >  1:3625872/1‑150 (MQ=255)
                                          cATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGc                                                                                                             >  2:6869057/1‑150 (MQ=255)
                                             tCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCa                                                                                                          >  1:5749313/1‑150 (MQ=255)
                                                tatTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTACACGT‑TAATTAgttttgaa                                                                                                       <  1:1224720/150‑8 (MQ=255)
                                                  tttAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACt                                                                                                     >  1:3911143/1‑150 (MQ=255)
                                                  tttAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACt                                                                                                     >  1:6931577/1‑150 (MQ=255)
                                                  tttAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACt                                                                                                     >  2:5051735/1‑150 (MQ=255)
                                                  tttAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACt                                                                                                     <  1:595774/150‑1 (MQ=255)
                                                    tAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACttt                                                                                                   >  2:6804161/1‑150 (MQ=255)
                                                    tAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACttt                                                                                                   >  2:4894667/1‑150 (MQ=255)
                                                     aaaaTGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTa                                                                                                  <  2:420618/150‑1 (MQ=255)
                                                      aaaTGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAg                                                                                                 >  1:6415176/1‑150 (MQ=255)
                                                          gTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGcaac                                                                                             <  1:3359352/150‑1 (MQ=255)
                                                           ttAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGcaaca                                                                                            >  2:3982432/1‑150 (MQ=255)
                                                                   aattgaTATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCcgc                                                                                    >  1:538441/1‑150 (MQ=255)
                                                                    attgaTATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCcgcg                                                                                   >  2:5531105/1‑150 (MQ=255)
                                                                     ttgaTATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCgcgc                                                                                  <  2:1892541/150‑1 (MQ=255)
                                                                        atatTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCaa                                                                               <  2:1246555/150‑1 (MQ=255)
                                                                            tttAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCTAAAACGCCCGCGCCAACGGt                                                                           >  2:4997156/1‑150 (MQ=255)
                                                                                  tatGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGgcc                                                                     <  2:3521928/150‑1 (MQ=255)
                                                                                    tGAATAATTTATTCGTTCTGACATTACGAATATGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGgccgc                                                                   <  1:4219753/150‑1 (MQ=255)
                                                                                    tGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGgccgc                                                                   <  1:4773386/150‑1 (MQ=255)
                                                                                     gAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGgccgcc                                                                  >  1:2345619/1‑150 (MQ=255)
                                                                                         aatTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCa                                                              >  1:3213297/1‑150 (MQ=255)
                                                                                          atTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCAc                                                             >  1:2879295/1‑150 (MQ=255)
                                                                                           tttATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACg                                                            >  1:330061/1‑150 (MQ=255)
                                                                                              aTTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGAt                                                         <  1:1030403/150‑1 (MQ=255)
                                                                                              aTTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGAt                                                         <  1:5852617/150‑1 (MQ=255)
                                                                                              aTTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTACACGGAt                                                         >  1:4827617/1‑150 (MQ=255)
                                                                                               ttCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGAtt                                                        <  1:932078/150‑1 (MQ=255)
                                                                                               ttCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGAtt                                                        >  1:2048910/1‑150 (MQ=255)
                                                                                               ttCGTTCTGAACGTACGAATAAGATATGCCGTCAACCAAGGCAACAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGGAATTAGCCCCGACCTTTCGCAACACCGCCCGCGCCAACGGTACGGCCGCCTTCACGGAtt                                                        <  2:5732720/150‑1 (MQ=37)
                                                                                                tCGTTCTTACATTACTATTAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTg                                                       <  2:6685830/150‑1 (MQ=255)
                                                                                                tCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTg                                                       <  2:4769690/150‑1 (MQ=255)
                                                                                                  gTTCTGACAGTACGAATAATATATGTCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCg                                                     <  1:4111010/150‑1 (MQ=255)
                                                                                                  gTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCg                                                     <  1:4455911/150‑1 (MQ=255)
                                                                                                     cTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGaaa                                                  <  2:4117458/150‑1 (MQ=255)
                                                                                                      tGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAAc                                                 >  1:1783492/1‑150 (MQ=255)
                                                                                                        aCAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGc                                               >  1:7130937/1‑150 (MQ=255)
                                                                                                            tACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGACACGCAGAc                                           >  2:4610726/1‑150 (MQ=255)
                                                                                                            tACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGAc                                           >  1:3558812/1‑150 (MQ=255)
                                                                                                               gAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGACGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCCGAACTTTAGCAACAACGCCCGCGCCAACGGTCCGGCCGCCTTCACGGATTGCGAAACGCAGACcgt                                        >  1:3696407/1‑150 (MQ=255)
                                                                                                                aaTAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACcgtc                                       <  2:4809455/150‑1 (MQ=255)
                                                                                                                   aaGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGACACGCAGACCgtcgtc                                    >  2:5200392/1‑150 (MQ=255)
                                                                                                                    aGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTTATTAGCCCTGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTcc                                   <  2:1351993/150‑1 (MQ=255)
                                                                                                                      atatGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCAt                                 >  1:6678472/1‑150 (MQ=255)
                                                                                                                      atatGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCAt                                 >  2:6968312/1‑150 (MQ=255)
                                                                                                                       tatGCCGTCAACACATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCATc                                <  1:4571165/150‑1 (MQ=255)
                                                                                                                       tatGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCATc                                <  1:5070872/150‑1 (MQ=255)
                                                                                                                           ccGTCAACAAATGCAAAATGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑TCGTGTAATTAGGCCAGAAGTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCTCGGATTGCGAAACGCAGACCGTCGTCCATCGCGa                            >  2:6418356/1‑150 (MQ=25)
                                                                                                                              tCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCATCGCGATCg                         <  1:1569546/150‑1 (MQ=255)
                                                                                                                              tCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCATCGCGATCg                         >  2:5993538/1‑150 (MQ=255)
                                                                                                                                aacaaATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACCACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCATCGCGATCggg                       <  2:1317851/150‑1 (MQ=255)
                                                                                                                                aacaaATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCATCGCGATCggg                       >  2:627039/1‑150 (MQ=255)
                                                                                                                                 acaaATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCATCGCGATCGGGt                      >  2:2279824/1‑150 (MQ=255)
                                                                                                                                  caaAGGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCATCGCGATCGGGTg                     <  1:6828361/150‑1 (MQ=255)
                                                                                                                                   aaaTGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCATCGCGATCGGGTgg                    >  2:6170791/1‑150 (MQ=255)
                                                                                                                                     aTGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑CCGTGTAATTAGCCCAGACCTTTAGCAACCACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCATCGCGAGCGGGTGGAt                  <  2:1942538/150‑1 (MQ=255)
                                                                                                                                        cAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCATCGCGATCGGGTGGATCAg               >  2:7036400/1‑150 (MQ=255)
                                                                                                                                        cAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCATCGCGATCGGGTGGATCAg               >  2:1197903/1‑150 (MQ=255)
                                                                                                                                         aaaaaGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCATCGCGATCGGGTGGATCAgg              <  2:2931635/150‑1 (MQ=255)
                                                                                                                                         aaaaaGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCATCGCGATCGGGTGGATCAgg              >  2:265445/1‑150 (MQ=255)
                                                                                                                                          aaaaGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCATCGCGATCGGGTGGATCAggg             >  1:6240646/1‑150 (MQ=255)
                                                                                                                                           aaaGGGCGCTTCGGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCATCGCGATCGGGTGGATCAGGGt            >  2:5690269/1‑150 (MQ=255)
                                                                                                                                           aaaGGGCGCTTCGGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCATCGCGATCGGGTGGATCAGGGt            >  1:1532378/1‑150 (MQ=255)
                                                                                                                                             aGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCATCGCGATCGGGTGGATCAGGGTaa          <  2:1826043/150‑1 (MQ=255)
                                                                                                                                             aGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCATCGCGATCGGGTGGATCAGGGTaa          >  1:5316186/1‑150 (MQ=255)
                                                                                                                                             aGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCATCGCGATCGGGTGGATCAGGGTaa          <  2:4282791/150‑1 (MQ=255)
                                                                                                                                              gggCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCATCGCGATCGGGTGGATCAGGGTaac         <  1:4988976/150‑1 (MQ=255)
                                                                                                                                                 cgcCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCATCGCGATCGGGTGGATCAGGGTaacaac      <  2:3311563/150‑1 (MQ=255)
                                                                                                                                                 cgcCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCATCGCGATCGGGTGGATCAGGGTaacaac      <  1:4367347/150‑1 (MQ=255)
                                                                                                                                                  gcCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCATCGCGATCGGGTGGATCAGGGTAACAAcc     >  2:1013509/1‑150 (MQ=255)
                                                                                                                                                     gAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCATCGCGATCGGGTGGATCAGGGTAACAACCAtt  >  2:2436400/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                      
TAAGAAAAAAGCCTGACAAATGAAGCATTTTAAAAACAGAAACATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCATCGCGATCGGGTGGATCAGGGTAACAACCATT  >  NC_000913/3469958‑3470256

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑