Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,470,109 A→G 5.5% intergenic (‑256/+36) chiA ← / ← tufA periplasmic endochitinase/translation elongation factor EF‑Tu 1

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,470,1090AG 5.5% 1389.3 / 46.3 417intergenic (‑256/+36)chiA/tufAperiplasmic endochitinase/translation elongation factor EF‑Tu 1
Reads supporting (aligned to +/- strand):  ref base A (202/190);  new base G (8/15);  total (211/206)
Fisher's exact test for biased strand distribution p-value = 1.36e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.87e-01

Only 100 of 426 total aligned reads displayed.

AGAAAAAAGCCTGACAAATGAAGCATTTTAAAAACAGAAACATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCATCGCGATCGGGTGGATCAGGGTAACAACCATTTT  >  NC_000913/3469960‑3470258
                                                                                                                                                     |                                                                                                                                                      
aGAAAAAAGCCTGACACATGAAGCATTTTAAAAACAGAAACATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGaa                                                                                                                                                        <  1:6316270/150‑1 (MQ=255)
    aaaaGCCTGACAAATGAAGCATTTTAAAAACAGAAACATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAgcgc                                                                                                                                                    <  2:841069/150‑1 (MQ=255)
    aaaaGCCTGACAAATGAAGCATTTTAAAAACAGAAACATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAgcgc                                                                                                                                                    <  1:5575902/150‑1 (MQ=255)
        gCCTGACAAATGAAGCATTTTAAAAACAGAAACATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCtt                                                                                                                                                >  1:2636685/1‑150 (MQ=255)
         ccTGACAAATGAAGCATTTTAAAAACAGAAACATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCttt                                                                                                                                               >  1:3098290/1‑150 (MQ=255)
          cTGACAAATGAAGCATTTTAAAAACAGAAACATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCtttt                                                                                                                                              <  2:6442482/150‑1 (MQ=255)
          cTGACAAATGAAGCATTTTAAAAACAGAAACATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCtttt                                                                                                                                              <  2:1002900/150‑1 (MQ=255)
          cTGACAAATGAAGCATTTTAAAAACAGAAACATTCATATTGAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCTTCGGCGCCCtttt                                                                                                                                              <  2:1152645/150‑1 (MQ=255)
           tGACAAATGAAGCATTTTAAAAACAGAAACATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTttc                                                                                                                                             >  1:4422670/1‑150 (MQ=255)
             aCAAATGAAGCATTTTAAAAACAGAAACATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCTGCGGCGCCCtttttag                                                                                                                                           >  1:6237113/1‑147 (MQ=255)
              cAAATGACGCATTTTAAAAACAGAAACATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCGAAAAGGGCGCTTCGGCGCCCtttttgca                                                                                                                                          <  1:2814710/150‑5 (MQ=255)
              cAAATGAAGCATTTTAAAAACAGAAACATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTttcaat                                                                                                                                          <  2:103487/150‑1 (MQ=255)
              cAAATGAAGCATTTTAAAAACAGAAACATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTttcaat                                                                                                                                          <  2:5557508/150‑1 (MQ=255)
               aaaTGAAGCATTTTAAAAACAGAAACATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTttcaatt                                                                                                                                         >  2:4455911/1‑150 (MQ=255)
               aaaTGAAGCATTTTAAAAACAGAAACATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTttcaatt                                                                                                                                         <  1:6414564/150‑1 (MQ=255)
                aaTGAAGCATTTTAAAAACAGAAACATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTttcaattc                                                                                                                                        >  2:7144921/1‑150 (MQ=255)
                       cATTTTAAAAACAGAAACATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTa                                                                                                                                 >  1:2447541/1‑150 (MQ=255)
                       cATTTTAAAAACAGAAACATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTa                                                                                                                                 >  1:2297715/1‑150 (MQ=255)
                          tttAAAAACAGAAACATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAATTGGGCGCCGAAGCGCCCTTTTCAATTCAATACTAAtt                                                                                                                              >  1:3593418/1‑150 (MQ=255)
                           ttAAAAACAGAAACATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAATCTAATTa                                                                                                                             >  2:5063827/1‑150 (MQ=255)
                               aaaCAGAAACATTCATATTTAAAATGTTAAATTGAATTGATATTTTATATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACgt                                                                                                                        <  1:6409175/150‑1 (MQ=255)
                               aaaCAGAAACATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACgt                                                                                                                        >  2:3737081/1‑150 (MQ=255)
                               aaaCAGAAACATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACgt                                                                                                                        >  2:1217068/1‑150 (MQ=255)
                                 aCAGAAACATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACgtgt                                                                                                                      <  1:1286020/150‑1 (MQ=255)
                                   aGAAACATTCATATTTAGAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTaa                                                                                                                    >  2:1348701/1‑150 (MQ=255)
                                   aGAAACATTCATATTTAAAATGTTAAATAGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTaa                                                                                                                    >  2:6949710/1‑150 (MQ=255)
                                     aaaCATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAAtt                                                                                                                  >  2:5288695/1‑150 (MQ=255)
                                        cATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGc                                                                                                               >  2:6869057/1‑150 (MQ=255)
                                              tatTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTACACGT‑TAATTAgttttgaa                                                                                                         <  1:1224720/150‑8 (MQ=255)
                                                tttAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACt                                                                                                       >  1:3911143/1‑150 (MQ=255)
                                                  tAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACttt                                                                                                     >  2:6804161/1‑150 (MQ=255)
                                                   aaaaTGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTa                                                                                                    <  2:420618/150‑1 (MQ=255)
                                                    aaaTGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAg                                                                                                   <  1:5297326/150‑1 (MQ=255)
                                                     aaTGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGc                                                                                                  <  2:1734183/150‑1 (MQ=255)
                                                     aaTGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATCCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGc                                                                                                  <  1:4936813/150‑1 (MQ=255)
                                                       tGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGcaa                                                                                                <  2:2672317/150‑1 (MQ=255)
                                                        gTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGcaac                                                                                               <  1:3359352/150‑1 (MQ=255)
                                                         ttAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGcaaca                                                                                              >  1:4825153/1‑150 (MQ=255)
                                                         ttAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGcaaca                                                                                              >  2:3982432/1‑150 (MQ=255)
                                                         ttAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCAAGAACTTAAGcaaca                                                                                              >  2:5875821/1‑150 (MQ=255)
                                                                gaattgaTATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCcg                                                                                       >  1:5738218/1‑150 (MQ=255)
                                                                 aattgaTATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCcgc                                                                                      >  1:538404/1‑150 (MQ=255)
                                                                          tttAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGTTATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTCATTAGCCCAGAACTTTAGCACCCACGCCCGCGCCACCGGt                                                                             >  2:4997173/1‑150 (MQ=255)
                                                                             aaaTATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTATTTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACg                                                                          <  1:4758722/150‑1 (MQ=255)
                                                                                  tGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGgccgc                                                                     <  2:5757113/150‑1 (MQ=255)
                                                                                  tGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGgccgc                                                                     <  2:3044776/150‑1 (MQ=255)
                                                                                   gAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGgccgcc                                                                    >  1:2345995/1‑150 (MQ=255)
                                                                                    aataatTTTTTCTTTCTGACAGTACGAATAATATATGCCGTAAACAAATGCAAAATGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑AGGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGCACGGCCGCCt                                                                   <  1:300623/150‑1 (MQ=255)
                                                                                    aataatTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCt                                                                   >  2:2357582/1‑150 (MQ=255)
                                                                                      taatTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTc                                                                 >  1:3138442/1‑150 (MQ=255)
                                                                                        atTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCAc                                                               >  1:2879300/1‑150 (MQ=255)
                                                                                         tttATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACg                                                              >  1:330061/1‑150 (MQ=255)
                                                                                          ttATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACgg                                                             <  1:4520294/150‑1 (MQ=255)
                                                                                            aTTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGAt                                                           <  1:1030403/150‑1 (MQ=255)
                                                                                             ttCGTTCTGACAGTACGAATAAGATATTCCGTCAAGAAATGAAATAAGGTCGCAGTAGCGCAATTTTCAATTCATTACTAATTA‑CCGTGTAATTAGCCCAGAACTTTAGCAACAAGGCCCGCGCCTACGGTAGGGCCGACTTCACGGttt                                                          <  2:5996471/150‑1 (MQ=255)
                                                                                             ttCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGAtt                                                          >  1:2048910/1‑150 (MQ=255)
                                                                                              tCGTTCTTACATTACTATTAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTg                                                         <  2:6685830/150‑1 (MQ=255)
                                                                                              tCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTg                                                         <  2:4769690/150‑1 (MQ=255)
                                                                                               cGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGc                                                        <  1:4209323/150‑1 (MQ=255)
                                                                                                  tCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGaa                                                     <  2:2121834/150‑1 (MQ=255)
                                                                                                  tCTGACAGTACGAATAAGAAATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGaa                                                     >  2:5496244/1‑150 (MQ=255)
                                                                                                   cTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGaaa                                                    <  2:4636937/150‑1 (MQ=255)
                                                                                                   cTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGaaa                                                    <  2:4117488/150‑1 (MQ=255)
                                                                                                    tGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAAc                                                   >  1:1783492/1‑150 (MQ=255)
                                                                                                         gTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGa                                              <  1:5022516/150‑1 (MQ=255)
                                                                                                         gTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGa                                              >  2:1686017/1‑150 (MQ=255)
                                                                                                             gAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGACGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCCGAACTTTAGCAACAACGCCCGCGCCAACGGTCCGGCCGCCTTCACGGATTGCGAAACGCAGACcgt                                          >  1:3696407/1‑150 (MQ=255)
                                                                                                             gAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACcgt                                          >  1:7046548/1‑150 (MQ=255)
                                                                                                              aaTAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACcgtc                                         <  2:4809455/150‑1 (MQ=255)
                                                                                                                tAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACcgtcgt                                       >  2:3652148/1‑150 (MQ=255)
                                                                                                                tAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACcgtcgt                                       >  1:5900331/1‑150 (MQ=255)
                                                                                                                 aaGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGACACGCAGACCgtcgtc                                      >  2:5200392/1‑150 (MQ=255)
                                                                                                                    atatGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCAt                                   >  2:1916786/1‑150 (MQ=255)
                                                                                                                     tatGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCATc                                  <  1:5070831/150‑1 (MQ=255)
                                                                                                                      atGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCATcg                                 >  1:3505539/1‑150 (MQ=255)
                                                                                                                            tCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCCTCGCGAGCg                           >  1:5839224/1‑150 (MQ=255)
                                                                                                                            tCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCATCGCGATCg                           <  1:4096813/150‑1 (MQ=255)
                                                                                                                            tCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCAGCGCGATCg                           >  2:1315616/1‑150 (MQ=255)
                                                                                                                             caacaaATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCATCGCGATCgg                          <  2:1876059/150‑1 (MQ=255)
                                                                                                                              aacaaATGCAAAAAGGGCGCCGAAGCGCCCTGTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCACCGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCATCGCGCTCggg                         >  2:627070/1‑150 (MQ=255)
                                                                                                                               acaaATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCATCGCGATCGGGt                        >  2:353044/1‑150 (MQ=255)
                                                                                                                                caaAGGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCATCGCGATCGGGTg                       <  1:6828361/150‑1 (MQ=255)
                                                                                                                                 aaaTGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCATCGCGATCGGGTgg                      >  2:6170791/1‑150 (MQ=255)
                                                                                                                                  aaTGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCATCGCGATCGGGTGGa                     <  2:2456557/150‑1 (MQ=255)
                                                                                                                                      cAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCATCGCGATCGGGTGGATCAg                 >  2:7036400/1‑150 (MQ=255)
                                                                                                                                      cAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACAAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCATAGCGAACGGGTGGATCAg                 >  1:4329064/1‑150 (MQ=255)
                                                                                                                                       aaaaaGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCATCGCGATCGGGTGGATCAgg                <  2:6319400/150‑1 (MQ=255)
                                                                                                                                        aaaaGGGCGCTTCGGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCATCGCGATCGGGTGGATCAggg               >  1:6587557/1‑150 (MQ=255)
                                                                                                                                         aaaGGGCGCTTCGGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGACACGCAGACCGTCGTCCATCGCGATCGGGTGGATCAGGGt              >  2:383131/1‑150 (MQ=18)
                                                                                                                                         aaaGGGCGCTTCGGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCATCGCGATCGGGTGGATCAGGGt              >  2:5690269/1‑150 (MQ=255)
                                                                                                                                         aaaGGGCGCTTCGGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCATCGCGATCGGGTGGATCAGGGt              >  1:1532378/1‑150 (MQ=255)
                                                                                                                                         aaaGGGCGCTTCGGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCATCGCGATCGGGTGGATCAGGGt              >  1:748557/1‑150 (MQ=255)
                                                                                                                                           aGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCATCGCGATCGGGTGGATCAGGGTaa            <  2:4282791/150‑1 (MQ=255)
                                                                                                                                             ggCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCATACCGTCGTCCATCGCGATCGGGTGGATCAGGGTaaca          >  2:3158158/1‑150 (MQ=255)
                                                                                                                                               cgcCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCATCGCGATCGGGTGGATCAGGGTaacaac        >  2:6581620/1‑150 (MQ=255)
                                                                                                                                                gcCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCATCGCGATCGGGTGGATCAGGGTAACAAcc       >  1:1608394/1‑150 (MQ=255)
                                                                                                                                                gcCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCATCGCGATCGGGTGGATCAGGGTAACAAcc       >  2:335955/1‑150 (MQ=255)
                                                                                                                                                  cGAAGCGCCCTTTTCAATTCAAAACTAATTA‑CCGTGTAATTAGCCCAGAACTTTAGCACCCACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCATCGCGATCGGGTGGATCAGGGTAACAACCAt     <  2:4902253/150‑1 (MQ=255)
                                                                                                                                                    aaGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCATCGCGATCGGGTGGATCAGGGTAACAACCAttt   <  2:1492409/150‑1 (MQ=255)
                                                                                                                                                    aaGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCATCGCGATCGGGTGGATCAGGGTAACAACCAttt   <  1:6908808/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                      
AGAAAAAAGCCTGACAAATGAAGCATTTTAAAAACAGAAACATTCATATTTAAAATGTTAAATTGAATTGATATTTTAAATATGAATAATTTATTCGTTCTGACAGTACGAATAAGATATGCCGTCAACAAATGCAAAAAGGGCGCCGAAGCGCCCTTTTCAATTCAAAACTAATTA‑ACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACGGTACGGCCGCCTTCACGGATTGCGAAACGCAGACCGTCGTCCATCGCGATCGGGTGGATCAGGGTAACAACCATTTT  >  NC_000913/3469960‑3470258

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑