New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4528019 =126 (1.020)3 (0.030) 3/262 NT 2.5% noncoding (43/90 nt) ryjB novel sRNA, function unknown
?NC_000913 4528061 = 115 (0.990)noncoding (85/90 nt) ryjB novel sRNA, function unknown
Rejected: Frequency below/above cutoff threshold.

CCAATTTCGTTGACCAGGCGCGAGTCAGTCAGTTTATGGAGAAAGTGCATCATATACGCCGATAAGATGGGGATAAGCAGAGCGCTTATCCCCGGCAAAGAGCAATAACCCTTCTGCGATCCCTGCCGCCTTCGTCAAAAGTATCGACGGGGATCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/4528175‑4528019
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggatcgcAGAAGGGTTATTGCTCTTTGCCGGGGATAAGCGCTCTGCTTATCCCCATCTTATCGGCGTATATGATGCACTTTCTCCATAAACTGACTGACTCGCGCCTGGTCAACGAAATTGGCAAAAACGCCGTCCTTTTTAAAGGTGGTTGCGGT  >  NC_000913/4528061‑4528209
                                                                                                                                                                                                                                                                                                                  
CCAATTTCGTTGACCAGTCGCGAGTCAGTCAGTTAATGGAGAAAGTGCATCATATACGCCGATAAGATGGGGATAAGCAGAGCGCTTATCACCGGCAAAGAGCAATAACCCTTCTGCGATCCCTGCCGCCTTCGTCAAAAGTATCGACGG                                                                                                                                                              >  2:1000476/1‑150
CCAATTTCGTTGACCAGGCGCGAGTCAGTCAGTTTATGGAGAAAGTGCATCATATACGCCGATAAGATGGGGATAAGCAGAGCGCTTATCCCCGGCAAAGAGCAATAACCCTTCTGCGATCCCTGCCGCCTTCGTCAAAAGTATCGACGG                                                                                                                                                              <  1:10175/150‑1
CCAATTTCGTTGACCAGGCGCGAGTCAGTCAGTTTATGGAGAAAGTGCATCATATACGCCGATAAGATGGGGATAAGCAGAGCGCTTATCCCCGGCAAAGAGCAATAACCCTTCTGCGATCCCTGCCGCCTTCGTCAAAAGTATCGACGG                                                                                                                                                              >  1:1292967/1‑150
CCAATTTCGTTGACCAGGCGCGAGTCAGTCAGTTTATGGAGAAAGTGCATCATATACGCCGATAAGATGGGGATAAGCAGAGCGCTTATCCCCGGCAAAGAGCAATAACCCTTCTGCGATCCCTGCCGCCTTCGTCAAAAGTATCGACGG                                                                                                                                                              <  2:101301/150‑1
 CAATTTCGTTGACCAGGCGCGAGTCAGTCAGTTTATGGAGAAAGTGCATCATATACGCCGATAAGATGGGGATAAGCAGAGCGCTTATCCCCGGCAAAGAGCAATAACCCTTCTGCGATCCCTGCCGCCTTCGTCAAACGTATCGACGGG                                                                                                                                                             >  2:446843/1‑150
 CAATTTCGTTGACCAGGCGCGAGTCAGTCAGTTTATGGAGAAAGTGCATCATATACGCCGATAAGATGGGGATAAGCAGAGCGCTTATCCCCGGCAAAGAGCAATAACCCTTCTGCGATCCCTGCCGCCTTCGTCAAAAGTATCGACGGG                                                                                                                                                             >  1:1050003/1‑150
 CAATTTCGTTGACCAGGCGCGAGTCAGTCAGTTTATGGAGAAAGTGCATCATATACGCCGATAAGATGGGGATAAGCAGAGCGCTTATCCCCGGCAAAGAGCAATAACCCTTCTGCGATCCCTGCCGCCTTCGTCAAAAGTATCGACGGG                                                                                                                                                             >  2:1742142/1‑150
 CAATTTCGTTGACCAGGCGCGAGTCAGTCAGTTTATGGAGAAAGTGCATCATATACGCCGATAAGATGGGGATAAGCAGAGCGCTTATCCCCGGCAAAGAGCAATAACCCTTCTGCGATCCCTGCCGCCTTCGTCAAAAGTATCGACGGG                                                                                                                                                             <  2:1432610/150‑1
  AATTTCGTTGACCAGGCGCGAGTCAGTCAGTTTATGGAGAAAGTGCATCATATACGCCGATAAGATGGGGATAAGCAGAGCGCTTATCCCCGGCAAAGAGCAATAACCCTTCTGCGATCCCTGCCGCCTTCGTCAAAAGTATCGACGGGG                                                                                                                                                            <  1:503369/150‑1
     TTCGTTGACCAGGCGCGAGTCAGTCAGTTTATGGAGAAAGTGCATCATATACGCCGATAAGATGGGGATAAGCAGAGCGCTTATCCCCGGCAAAGAGCAATAACCCTTCTGCGATCCCTGCCGCCTTCGTCAAAAGTATCGACGGGGATC                                                                                                                                                         <  2:1652815/150‑1
     TTCGTAGACCATGCCCGAGTCAGTCAGTTACTGGAGAAAGTTCCACATATACGCCGATAAGATGGGGATAAGCAGAGCGCTTATGCCCGGCAAAGAGCAATAACCCTTCTGCGATCCCTGCCGCCTTCGTCAAAAGTCTCGACGGGGATC                                                                                                                                                         <  2:2000235/150‑1
      TCGTTGACCAGGCGCGAGTCAGTCAGTTTATGGAGAAAGTGCATCATATACGCCGATAAGATGGGGATAAGCAGAGCGCTTATCCCCGGCAAAGAGCAATAACCCTTCTGCGATCCCTGCCGCCTTCGTCAAAAGTATCGACGGGGATCG                                                                                                                                                        >  1:1832623/1‑150
                                                                                                      CAATAACCCTTCTGCGATCCCTGCCGCCTTAGTCAAAAGTATCGACGGGGATCGCGGAAGGGTTATTGCTCTTTGCCGGGGATAAGCGCGCTGCTTATCCCCATCTTATCGGCGTATATGATGCACTTTCTCCATAAACTGACTGCCTCG                                                        >  1:1328450/1‑150
                                                                                                              CTTCTGCGATCCCTGCCGCCTTCGTCAAAAGTATCGACGGGGATCGCAGAAGGGTTATTGCTCTTTGCCGGGGATAAGCGCTCTGCTTATCCCCATCTTATCGGCGTATATGATGCACTTTCTCCATAAACTGACTGACTCGCGCCTGGT                                                >  2:1578623/1‑150
                                                                                                                   GCGATCCCTGCCGCCTTCGTCAAAAGTATCGACGGGGATCGCAGAAGGGTTATTGCTCTTTGCCGGGGATAAGCGCTCTGCTTATCCCCATCTTATCGGCGTATATGATGAACTTTCTCCATTAACTGACTGACTCGCGCCTGGTCAACG                                           >  2:1049761/1‑150
                                                                                                                                                      GGATCGCAGAAGGGTTATTGCTCTTTGCCGGGGATAAGCGCTCTGCTTATCCCCATCTTATCGGCGTATATGATGCACTTTCTCCATAAACTGACTGACTCGCGCCTGGTCAACGAAATTGGCAAAAACGCCGTCCTTTTTAAAGGTGGT        >  1:1636840/1‑150
                                                                                                                                                       GATCGCAGAAGGGTTATTGCTCTTTGCCGGGGATAAGCGCTCTGCTTATCCCCATCTTATCGGCGTATATGATGCACTTTCTCCATAAACTGACTGACTCGCGCCTGGTCAACGAAATTGGCAAAAACGCCGTCCTTTTTAAAGGTGGTT       >  1:703551/1‑150
                                                                                                                                                         TCGCAGAAGGGGTATTGCTCTTTGCCGGGGATAAGCGCTCTGCTTATCCCCATCTTATCGGCGTATATGATTCACTTTCTCCATAAACTGACTGACTCGCGCCTGTTCAACGTAATTGGCAAAAACGCCGTCCTTTTTAAAGGTGGTTGC     <  1:1177130/150‑1
                                                                                                                                                            CAGAAGGGTTATTGCTCTTTGCCGGGGATAAGCGCTCTGCTTATCCCCATCTTATCGGCGTATATGATGCACTTTCTCCATAAACTGACTGACTCGCGCCTGGTCAACGAAATTGGCAAAAACGCCGTCCTTTTTAAAGGTGGTTGCGGT  >  2:866715/1‑150
                                                                                                                                                                                                                                                                                                                  
CCAATTTCGTTGACCAGGCGCGAGTCAGTCAGTTTATGGAGAAAGTGCATCATATACGCCGATAAGATGGGGATAAGCAGAGCGCTTATCCCCGGCAAAGAGCAATAACCCTTCTGCGATCCCTGCCGCCTTCGTCAAAAGTATCGACGGGGATCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/4528175‑4528019
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggatcgcAGAAGGGTTATTGCTCTTTGCCGGGGATAAGCGCTCTGCTTATCCCCATCTTATCGGCGTATATGATGCACTTTCTCCATAAACTGACTGACTCGCGCCTGGTCAACGAAATTGGCAAAAACGCCGTCCTTTTTAAAGGTGGTTGCGGT  >  NC_000913/4528061‑4528209

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.