Predicted mutation
evidence seq id position mutation freq annotation gene description
MC JC NC_000913 3,815,859 Δ82 bp 100% [rph][rph] [rph], [rph]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 3815859 3815940 82 149 [0] [0] 147 [rph]–[rph] [rph],[rph]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 38158580 (0.000)132 (1.150) 87/258 NT 100% pseudogene (24/48 nt) rph ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH
?NC_000913 3815941 = 0 (0.000)pseudogene (609/669 nt) rph ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH

Only 100 of 149 total aligned reads displayed.

AAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCA  >  NC_000913/3815709‑3816007
                                                                                                                                                     |                                                                                                                                                     
aaaaTTTAAAACCTGCTTGCTATGCGCAAATTAAATAAACTGGCCCTTATATGGTTTCATGCCTTCGCTCCTCATCTTAATTTAATACACACAAAAAAATGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGC                                                                                                                                                       <  2:1930352‑M1/150‑1 (MQ=255)
aaaCTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTAGCCAGCGCCGCCTTCTGC                                                                                                                                                       >  2:271422‑M1/1‑150 (MQ=255)
  aCTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcg                                                                                                                                                     >  2:937647‑M1/1‑148 (MQ=255)
       aaCACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccc                                                                                                                                                >  1:84435‑M1/1‑143 (MQ=255)
        acacCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccct                                                                                                                                               >  1:597162‑M1/1‑142 (MQ=255)
         cacCTGCTTGCTAAGCGCAAATTCAATAAACTGGAGCTGATATGGTTTCATGAATTCGCTCATCATCTTACTTTTCTACAGAAAAAAAAAAGGCGACTCATCAGTCGCCTAAAAAATCAGTTTGCCGGCGAAGACTTCAGAcgtcccctg                                                                                                                                              >  1:948038‑M1/1‑141 (MQ=255)
          acCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgc                                                                                                                                             <  2:1080983‑M1/150‑11 (MQ=255)
           ccTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcc                                                                                                                                            >  2:1880514‑M1/1‑139 (MQ=255)
            cTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTAGCCTTAAAAATCAGATTGACAGAGCCGCATTATGCcgtcccctgcac                                                                                                                                           >  2:1405946‑M1/1‑138 (MQ=255)
            cTGCTAGCTAAGCGCAAATTAAATAACCTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCCTCTTACTTTTCTACAGCCAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcac                                                                                                                                           <  1:189943‑M1/150‑13 (MQ=255)
                 tgctAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaa                                                                                                                                      >  2:1673430‑M1/1‑133 (MQ=255)
                 tgctAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaa                                                                                                                                      >  2:1479154‑M1/1‑133 (MQ=255)
                   ctAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatg                                                                                                                                    <  2:1478961‑M1/150‑20 (MQ=255)
                      aGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTGCGCTCCTCATCTTACTTTTCTTCAGACAAAATAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatg                                                                                                                                 <  1:1391290‑M1/150‑23 (MQ=255)
                       gcgcAAATTCAATAACCTGGCGCTTATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCAACACACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgc                                                                                                                                <  2:1586053‑M1/150‑24 (MQ=255)
                        cgcAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtccccggcacttcaatgatgcg                                                                                                                               >  2:369888‑M1/1‑126 (MQ=255)
                        cgcAAATTCAATAAACTGGAGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTAGTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcg                                                                                                                               >  1:2039828‑M1/1‑126 (MQ=255)
                             aTTCAATAAACTGGCGATTATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAACGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgt                                                                                                                          <  1:476364‑M1/150‑30 (MQ=255)
                                cAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCCTCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaaagatgcgcccgtcgt                                                                                                                       >  1:1887719‑M1/1‑118 (MQ=255)
                                cAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtctt                                                                                                                       >  2:1313496‑M1/1‑118 (MQ=255)
                                   tAAAGTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTATTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcgg                                                                                                                    <  1:1319967‑M1/150‑36 (MQ=255)
                                   tAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcgg                                                                                                                    >  1:936341‑M1/1‑115 (MQ=255)
                                     aaCTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtc                                                                                                                  >  2:1208505‑M1/1‑113 (MQ=255)
                                     aaCTGGCGCTGATATGGTTTCATGCCTTCGCCCCTCATCTTACTTTTCTACATACAAAAAACAGGCGACTCATCAGTCGCCTTAAAAATCAGATTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtc                                                                                                                  <  1:1777753‑M1/150‑38 (MQ=255)
                                      aCTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAACAGGCGACTCATCAGGCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtca                                                                                                                 <  2:245344‑M1/150‑39 (MQ=255)
                                        ttgcgctgATATGGTTGCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACATAAAAAAGGCGACTCATCAGTCGCCGTAAAAATCAGTTTGCCTGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatc                                                                                                               <  1:302011‑M1/148‑41 (MQ=255)
                                        tGGCGCTTAAATGTTTTCATGCCTTCGCTCCTCATCTTACTTTACAACAGACAAAAAAAACGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatc                                                                                                               <  2:1708517‑M1/150‑41 (MQ=255)
                                        tGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatc                                                                                                               <  1:1787003‑M1/150‑41 (MQ=255)
                                         ggCGCTTATTTGGTTTCTTTCCTTCGCTCCTCATATAAATTTTCTAAACACAAAAAAACCGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatca                                                                                                              <  2:1716623‑M1/150‑42 (MQ=255)
                                                 tatGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcttcactacgttc                                                                                                      >  1:77446‑M1/1‑101 (MQ=255)
                                                 tatGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttc                                                                                                      <  2:1188918‑M1/150‑50 (MQ=255)
                                                 tatGGTTTAATGCCTTCGCTCCTCATCTTATTTTTCTACACAAAAAAAAACGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttc                                                                                                      <  2:2033145‑M1/150‑50 (MQ=255)
                                                  atGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttca                                                                                                     >  2:1974462‑M1/1‑100 (MQ=255)
                                                    ggTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatg                                                                                                   <  1:1178335‑M1/150‑53 (MQ=255)
                                                    ggTTTCATGCCTTCGCTCATCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTACcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatg                                                                                                   <  2:1740072‑M1/150‑53 (MQ=255)
                                                        tCATTCCTTCGCTCCTAATCTTACTTTTATACATAAAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcgg                                                                                               <  1:954782‑M1/150‑57 (MQ=255)
                                                         cATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgatcatgtcggt                                                                                              >  1:1755503‑M1/1‑93 (MQ=255)
                                                                 cGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctcggcgg                                                                                      >  1:732043‑M1/1‑85 (MQ=255)
                                                                  gCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcataactacgttcatgtcggtctctgcggc                                                                                     >  2:125435‑M1/1‑84 (MQ=255)
                                                                         aTCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtct                                                                              <  1:10273‑M1/150‑74 (MQ=255)
                                                                          tCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtctt                                                                             <  1:371635‑M1/150‑75 (MQ=255)
                                                                            ttACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttca                                                                           <  1:1180287‑M1/150‑77 (MQ=255)
                                                                             tACTTTTCTACAGCCAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcgcctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaa                                                                          >  1:121851‑M1/1‑73 (MQ=255)
                                                                               ctattctaCAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCAAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgagcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacg                                                                        >  1:1732084‑M1/4‑71 (MQ=255)
                                                                               attttcTACAGAAAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacg                                                                        <  2:2104239‑M1/149‑80 (MQ=255)
                                                                                ttttCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgt                                                                       <  1:1464255‑M1/150‑81 (MQ=255)
                                                                                   tCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtatt                                                                    >  1:465371‑M1/1‑67 (MQ=255)
                                                                                     tACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctcttcggcagagtccgcaacgtattcc                                                                  >  1:1017899‑M1/1‑65 (MQ=255)
                                                                                     tACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagggtcttcaacgtattcc                                                                  <  2:1308978‑M1/150‑86 (MQ=255)
                                                                                     tACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattcc                                                                  >  2:1735398‑M1/1‑65 (MQ=255)
                                                                                     tACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattcc                                                                  <  2:137695‑M1/150‑86 (MQ=255)
                                                                                     tACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattcc                                                                  <  1:1107655‑M1/150‑86 (MQ=255)
                                                                                     tACAGACAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcactacaatgatgcgcccgtcttcgggcatcactacgttcatgtcggtctctgcggcagagtctgccacgtattccc                                                                 >  1:333902‑M1/1‑64 (MQ=255)
                                                                                     aacAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattcc                                                                  <  2:1400556‑M1/149‑86 (MQ=255)
                                                                                      aCAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTATGCcgtcccctgcacttcaatgatgcgccagtcttcggtcatcactacgttcatgtcggtcactgcggcagagtcttcaacgtattcca                                                                 >  1:1431502‑M1/1‑64 (MQ=255)
                                                                                         gACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagat                                                              >  1:1599345‑M1/1‑61 (MQ=255)
                                                                                          aCAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatc                                                             <  1:1843271‑M1/150‑91 (MQ=255)
                                                                                          aCAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggacatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatc                                                             <  1:79359‑M1/150‑91 (MQ=255)
                                                                                            aaaaaaaaGGCGACTCATCAGTCGCCTTAATAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgc                                                           <  1:764256‑M1/150‑93 (MQ=255)
                                                                                            aaaaaaaaGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcgggctctgcggcagagtcttcaacgtattccagatcgc                                                           <  2:1254893‑M1/150‑93 (MQ=255)
                                                                                               tttaaggcGACTGATGAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaa                                                        >  2:1172216‑M1/4‑55 (MQ=255)
                                                                                                 aaaGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaacc                                                      <  2:472599‑M1/150‑98 (MQ=255)
                                                                                                 aaaGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaacc                                                      <  2:603778‑M1/150‑98 (MQ=255)
                                                                                                  aaGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccg                                                     >  2:423325‑M1/1‑52 (MQ=255)
                                                                                                   aGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgc                                                    >  2:669608‑M1/1‑51 (MQ=255)
                                                                                                         cTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgcc                                              <  1:1945516‑M1/150‑106 (MQ=255)
                                                                                                         cTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgcc                                              <  1:650417‑M1/150‑106 (MQ=255)
                                                                                                          tcatcaGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccg                                             >  1:1576499‑M1/1‑44 (MQ=255)
                                                                                                          tcatcaGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccg                                             <  1:1313496‑M1/150‑107 (MQ=255)
                                                                                                           catcaGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatctctacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgt                                            >  1:1443382‑M1/1‑43 (MQ=255)
                                                                                                           catcaGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtccactgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctcagcggcagagtcttcaacgtattccagatcgcaacccgcatcgccgt                                            >  1:176144‑M1/1‑43 (MQ=255)
                                                                                                             tcaGTTGACTTAAAAATCAGTTTGCCAGAGCCTCCTTCTGCcgtcccctgaacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaaagtattccagatcgcaaaccgcttcgccgttc                                          <  1:88686‑M1/150‑110 (MQ=255)
                                                                                                               aGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcac                                        >  2:1647616‑M1/1‑39 (MQ=255)
                                                                                                               aGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcac                                        <  2:1808447‑M1/150‑112 (MQ=255)
                                                                                                                     cTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagaacgcaaaacgcttcgccgttaacaattcc                                  >  2:1843752‑M1/1‑33 (MQ=255)
                                                                                                                      ttAAAAATCAGATTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattccg                                 <  2:61095‑M1/150‑119 (MQ=255)
                                                                                                                       tAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagcgtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattccga                                >  2:501061‑M1/1‑31 (MQ=255)
                                                                                                                       tAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtagtccagctcgcaacccgcttcgccgtgcccaattccgc                                >  1:216557‑M1/1‑31 (MQ=255)
                                                                                                                        aaaaaTCAGTTTGCCAGCGGGGACTTCTGCcgtcacctgcacttcaatgatgcgcccgtcttccgtcatcactacgttcatgtcggtctctgcggaagagtcttcaacgtattccagatcgcaaaccgcttctccgttctcaattccgac                               <  2:884146‑M1/150‑121 (MQ=255)
                                                                                                                          aaaTCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattccgacag                             >  2:697059‑M1/1‑28 (MQ=255)
                                                                                                                           aaTCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattccgacaga                            >  2:1172565‑M1/1‑27 (MQ=255)
                                                                                                                              cAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcgtcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattccgacagaaac                         >  1:1210‑M1/1‑24 (MQ=255)
                                                                                                                              cAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcgtcggtcatcactacggacaggtcggtctctgcggcagagtcttcaccgtattccagatcgcaacacgcttcgccgttcacaaatccgacagaaac                         >  2:1586305‑M1/1‑24 (MQ=255)
                                                                                                                                  ttGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattccgacagaaactgcg                     >  1:1866330‑M1/1‑20 (MQ=255)
                                                                                                                                   tGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtcgctgcggcagagtcttcaacgtattccatatcgcaaaccgcttcgccgttcacaattccgacagaaactgcgg                    <  1:1283728‑M1/150‑132 (MQ=255)
                                                                                                                                   tGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcgggctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattccgacagaaactgcgg                    <  2:1336606‑M1/150‑132 (MQ=255)
                                                                                                                                    gCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattccgacagaaactgcggc                   >  2:254195‑M1/1‑18 (MQ=255)
                                                                                                                                     ccAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattccgacagaaactgcggct                  <  1:670842‑M1/150‑134 (MQ=255)
                                                                                                                                     ccAGCGCCGCCTTCTGCaggcccctgcacttcaatgatgcgccagtcttcggtaatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattccgacagaaactgcggct                  <  1:1739890‑M1/150‑134 (MQ=255)
                                                                                                                                      cAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagaggcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattccgaccgaaactgcggcta                 >  2:839607‑M1/1‑16 (MQ=255)
                                                                                                                                       aGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattccgacagaaactgcggctac                <  1:271422‑M1/150‑136 (MQ=255)
                                                                                                                                       aGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattccgacagaaactgcggctac                <  1:428320‑M1/150‑136 (MQ=255)
                                                                                                                                       aGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattccgacagaaactgcggctac                <  1:1646087‑M1/150‑136 (MQ=255)
                                                                                                                                          gccgccTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattcctacagaaactgcggctaccat             >  2:1976690‑M1/1‑12 (MQ=255)
                                                                                                                                             gccTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcgggctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattccgacagaaactgcggctaccatccc          <  1:1673430‑M1/150‑142 (MQ=255)
                                                                                                                                              ccTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattccgacagaaactgcggctaccatccct         <  2:827920‑M1/150‑143 (MQ=255)
                                                                                                                                                ttCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattccgacagaaactgcggctaccatcccttt       >  1:1951954‑M1/1‑6 (MQ=255)
                                                                                                                                                  cTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattccgacagaaactgcggctaccatccctttca     <  1:1208505‑M1/150‑147 (MQ=255)
                                                                                                                                                   tGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcgtcaacgtattccagatcgcaaaccgcttcgccgttcacaattccgacagaaactgcggctaccatcccttgcat    >  1:730195‑M1/1‑3 (MQ=255)
                                                                                                                                                     ccgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattccgacagaaactgcggctaccatccctttcatcg  <  2:208280‑M1/150‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
AAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCA  >  NC_000913/3815709‑3816007

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.