| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,160,882 | A→C | 10.0% | T833P (ACG→CCG) | mdtC → | multidrug efflux system, subunit C |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,160,882 | 0 | A | C | 10.0% | 273.2 / 2.3 | 124 | T833P (ACG→CCG) | mdtC | multidrug efflux system, subunit C |
| Reads supporting (aligned to +/- strand): ref base A (45/63); new base C (12/4); total (57/67) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.57e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 124 total aligned reads displayed.
ATGGCAACCGGCGAATGCCCCACTATCGGTGAATCATCAGGGATTATCGGCGGCCTCGACCATTTCGTTTAACCTGCCGACCGGAAAATCGCTCTCGGACGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGCAGGTGATCCTGATTATCGCCGCCATCGCCACGGTGTATATCGTGCTGGGTATCCTTTACGAGAGTTACGTACATCCGCTGACGATTC > NC_000913/2160734‑2161026 | ttGGCTACCGGCGAATGCGCGACTCTCGGTGAATCCTCAGGGATTAGCGGCGGCCGCGACCATTTCGTTTAACCAGCCGACCGGAAAATCGCTCTCGGACGCCAGTGCGGCGATCGATCGCGGAATGACCCAGCTTGGTGTGCCTTCGAc < 1:327236/149‑1 (MQ=255) tGGCAACCGGCGAATGCCCCACTATCGGTGAATCATCAGGGATTATCGGCGGCCTCGACCATTTCGTTTAAACTGCCGCCCGCAAAAACGCACTCGGACGCCAGTGCGGCGAACGATCGCCCAATGCCCCAGCTTGGTTTGCCTTCGCCg > 2:1337350/1‑150 (MQ=255) gCAACCGGCGAATGCCACACTATCGGTGAATCATCTGGGATTATCGGCGGACTCGACCATTACGTTTAACCTGCCGACCGGAAAATCGCTCTAGGACGCCAGTGCGGCGCTCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGt > 1:666256/1‑150 (MQ=255) cAACCGGCGAATGCCCCACTATCGGTGAATCATCAGGGATTATCGGCGGCCTCGACCATTTCGTTTAACCTGCCGACCGGAAAATCGCTCTCGGACGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTg > 1:255024/1‑150 (MQ=255) aaCCGGCGAATGCCCCACTATCGGTGAATCATCAGGGATTATCGGCGGCCTCGACCATTTCGTTTAACCTGCCGACCGGAAAATCGCTCTCGGACGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTgc < 1:705347/150‑1 (MQ=255) ggCGAATGCCCCACTATCGGTGAATCATCAGGGATTATCGGCGGCCTCGACCCTTTCGTATTACCTGCCGCGCGGAAAATCGCTCTCGGACGCCACTGCGGCGATCGATCGCGCAATGACCCCGCGTGGTGTGCCTTCGACGGTGCGCgg > 1:143379/1‑150 (MQ=255) ggCGAATGCCCCACTATCGGTGAATCATCAGGGATTATCGGCGGCCTCGACCATTTCGTTTAACCTGCCGACCGGAAAATCGCTCTCGGCCGCCAGTGCGGCGATCGATCGCGCCATGACCCAGCTTGGTGTGCCTTCGACCGTGCGCgg > 2:1516937/1‑150 (MQ=255) ggCGAATGCCCCACTATCGGTGAATCATCAGGGATTATCGGCGGCCTCGACCATTTCGTTTAACCTGCCGACCGGAAAATCGCTCTCGGACGCCAGTGCGGCGATCGATCGCGCAATGCCCCAGCTTGGTGTGCCTTCGACGGTGCGCgg > 1:480408/1‑150 (MQ=255) ggCGAATGCCCCACTATCGGTGAATCATCAGGGATTATCGGCGGCCTCGACCATTTCGTTTAACCTGCCGACCGGAAAATCGCTCTCGGACGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGCCGGTGCGCgg > 2:1285361/1‑150 (MQ=255) ggCGAATGCCCCACTATCGGTGAATCATCAGGGATTATCGGCGGCCTCGACCATTTCGTTTAACCTGCCGACCGGAAAATCGCTCTCGGACGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCgg > 2:1421684/1‑150 (MQ=255) aaTGCCCCACTATCGGTGAATCATCAGGGATTATCGGCGGCCTCGGCCATTTCGTTTAACCTGCCGACCGGAAAATCGCTCTCGGACGCCAGTGCGGCGATCGCTCGCGCAATCACCCAGCTTGGTGTGCCTTCGCCGGTGCGCGGCAGt > 2:417649/1‑150 (MQ=255) aaTGCCCCACTATCGGGGACTCATCAGGGATTATCGGCGGCCGCGACCATTTCGTTAACCCTGCCGACCGGAAAATCGCTCTCGGACGCCAGTGCGGCGATCGAGCGCGCAATGACCCCGCTTGGTGTGCCTTCGCCGGTGCGCGGCAGt < 2:2042296/150‑1 (MQ=255) cccACTATCGGTGAATCATCAGGGATTATCGGCGGCCTCGACCATTTCGTTTAACCTGCCGACCGGAAAATCGCTCTCGGACGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGc > 2:189841/1‑150 (MQ=255) ccACTATCGGTGAATCATCAGGGATTATCGGCGGCCTCGACCATTTCGTTTAACCTGCCGACCGGAAAATCGCTCTCGGACGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGcc > 1:832467/1‑150 (MQ=255) cACTATCGGTGAATCATCAGGGATTATCGGCGGCCTCGACCATTTCGTTTAACCTGCCGACCGGAAAATCGCTCTCGGACGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCg < 2:665652/150‑1 (MQ=255) cACTATCGGTGAATCATCAGGGATTATCGGCGGCCTCGACCATTTCGTTTAACCTGCCGACCGGAAAATCGCTCTCGGACGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCg < 1:1938682/150‑1 (MQ=255) gcggggtatcatcAGGGAGTATCGGCGGCCTCGACCATTTCGGGTCACCTGCCGACCGGAACATCGCTCGCGGACGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCTTGGTGTGCCGTCGACGGTGCGCGGCTGCTTTGCCGGCACg < 1:351746/143‑1 (MQ=255) ggTGAATCATCAGGGATTATCGGCGGCCTCGACCATTTCGTTTAACCTGCCGACCGGAAAATCGCTCTCGGACGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGgc > 2:1236993/1‑150 (MQ=255) gAATCATCAGGGATTATCGGCGGCCTCGACCATTTCGTTTAACCTGCCGACCGGAAAATCGCTCTCGGCCGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCa > 2:1276888/1‑150 (MQ=255) gAATCATCAGGGATTATCGGCGCCCTCGACCATTTCGTATAACCTGCCGACCGGAAAATCTCTCTATGACGCCAGTGCGGCGAGAGATCGCGCAATGAGCCACATTGGTTTGCCTTCTCCGGTGCGCGGCTGTTTTGCAGGCACGGCGCa > 2:1465411/1‑150 (MQ=255) atcatcAGGGATTATCGGCGGCCTCGACCATTTCGTTTAACCTGCCGACCGGAAAATCGCTCTCGGACGCCAGTGCGGCGATCGATCGCGCAATGACGCAGCTTGGTGTGCCTTCGCCGGTGCGCGGCAGTTTTGCCGGCACGGCGCAgg > 1:1999918/1‑150 (MQ=255) tcatcaGGGATTATCGGCGGCCTCGACCATTTCGTTTAACCTGCCGCCCGGAAAATCGCTCTCGGACGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGgt > 2:1842406/1‑150 (MQ=255) tcatcaGGGATTATCGGCGGCCTCGACCATTTCGTTTAACCTGCCGACCGGAAACTCGCTCTCGGACGCCAGTGCGGCGAGCGCTCGCGCAATGACCCAGCTTGGTGTGCCTTCGCCGGTGCGCGGCAGTTTTGCCGGCACGGCTCTGgt > 1:330339/1‑150 (MQ=255) catcaGGGATTATCGGCGGCCTCGACCATTTCGTTTAACCTGCCGACCGGAAAATCGCTCTCGGACGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGCCGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGgtg > 2:2017492/1‑150 (MQ=255) tcaGGGATTATCGGCGGCCTCGACCATTTCGTTTAACCTGCCGACCGGAAAATCGCTCTCGGACGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCTTGGTGTGTCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGtt > 1:1800225/1‑150 (MQ=255) aGGGATTATCGGCGGCCTCGCCCATTTCGTTTAACCTGCCGACCGGAAAATCGCTCTCGGACGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTcc > 2:332726/1‑150 (MQ=255) aGGGATTATCGGCGGCCTCGACCATTTCGTTTAACCTGCCGACCGGAAAATCGCTCTCGGACGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTcc < 1:1271716/150‑1 (MQ=255) aGGGATTATCGGCGGCCTCGACCATTTCGTTTAACCTGCCGACCGGAAAATCGCTCTCGGACGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTcc < 1:1455147/150‑1 (MQ=255) ggATTATCGGCGGCCTCGACCATTTCGTTTAACCTGCCGACCGGAAAATCGCTCTCGGACGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAg > 2:672661/1‑150 (MQ=255) ttATCGGCGGCCTCGACCATTTCGTTTAACCTGCCGTCCGGAATATCGCTCTCGGACGCCAGTGCGGCGAGCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGgag < 1:332880/150‑1 (MQ=255) aTCGGCGGCCTCGACCATTTCGTTTAACCTGCCGACCGGAAACTCTCTCTCGGACGCCAGTGCGGCGAGCGCTCGCGCAATGACCCCGCTTGGTGTGCCTTCGCCGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGAc < 1:2016224/150‑1 (MQ=255) aTCGGCGGCCTCGACCATTTCGTTTAACCTGCCGACCGGAAAATCGCTCTCGGACGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCTGGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGAc < 1:1268512/150‑1 (MQ=255) ggcggcCTCGACCATTTCGTTTAACCTGCCGACCGGAAAATCGCTCTCGGACGCCAGTGCGGTGATCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGAt > 2:974753/1‑150 (MQ=255) ggcggcCTCGACCATTTCGTTTAACCTGCCGACCGGAAAATCGCTCTCGGACGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGAt > 2:933240/1‑150 (MQ=255) ggcggcCTCGACCATTTCGTTTAACCTGCCGACCGGAAAATCGCGCTCGGACGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGAt < 2:763263/150‑1 (MQ=255) gcggcCTCGACCATTTCGTTTAACCTGCCGACCGGAAAATCGCTCTCGGACGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATg < 1:1895169/150‑1 (MQ=255) cgcccATTTCGTTTAACCTGCCGACCGGAAAATCGCGCTCGGACGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGc < 2:1936984/147‑1 (MQ=255) cGACCATTTCGTTTCACCTGCCGACCGGAAAATCGCTCTCGGACGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCTTGGTGGGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGc < 2:1693260/150‑1 (MQ=255) aTTTCGTTTAACCTGCCGACCGGAAAATCGCTCTCGGACGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGCCGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGCAGGTg > 1:1296182/1‑150 (MQ=255) cGTTTAACCTGCCGACCGGAAAATCGCTCTCGGACGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGCAGGTGATcc < 1:1357374/150‑1 (MQ=255) gTTTAACCTGCCGACCGGAAAATCGCTCTCGGACGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGCAGGTGATCCt < 2:494283/150‑1 (MQ=255) ttAACCTGCCGACCGGAAAATCGCTCTCGGACGCCAGTGCGGCGATCGTTCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGCAGGTGATCCGGa > 2:966247/1‑150 (MQ=255) gtacccTGCCGCCCGGAAAATCGCTCTCGGACGCCAGGGCGGCGATCGATCGCGCAATGACCCAGCGTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGCAGGTGATCCTGa < 2:1504739/146‑1 (MQ=255) tAACCTGCCGACCGGAAAATCGCTCTCGGACGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCCCGGCGCAGGTGTTCCAGGAGACGATGCACTCGCAGGTGATCCTGAt > 1:1277841/1‑150 (MQ=255) aaCCTGCCGACCGGAAAATCGCTCTCGGACGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCTCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGCAGGTGATCCTGAtt > 2:1225365/1‑150 (MQ=255) acatGCCGACCGGAAAATCGCTCTCGGACGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTTACGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGCAGGTGATCCTGATTa > 2:1770328/4‑150 (MQ=255) aCCTGCCGACCGGAAAATCGCTCTCGGACGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGCAGGTGATCCTGAttt > 1:975477/1‑149 (MQ=255) tGCCGACCGGAAAATCGCTCTCGGACGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGCAGGTGATCCTGATTATcg > 2:1627176/1‑150 (MQ=255) gCCGACCGGAAAATCGCTCTCGGACGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGCAGGTGATCCTGATTATcgc < 1:258070/150‑1 (MQ=255) gCCGACCGGAAAATCGCTCTCGGACGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGGGTTCCAGGAGACGATGAACTCGCAGGTGATCCTGATTATcgc > 2:206558/1‑150 (MQ=255) ccGACCGGAAAATCGCTCTCGGACGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCTGGGTGGGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGCAGGTGATCCTGATTATcgcc < 2:196667/150‑1 (MQ=255) cGACCGGAAAATCGCTCTCGGACGCCAGTGCGGCGATCGCTCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGGCGATGAACTCGCAGGGGATCCTGATTATcgccg > 2:1151718/1‑150 (MQ=255) gACCGGAAAATCGCTCTCGGACGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGCCGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGCAGGTGATCGTGATTATcggcgc > 1:385459/1‑150 (MQ=255) gACCGGAAAATCGCTCTCGGACGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGCAGGTGATCCTGATTATcgccgc > 1:1522929/1‑150 (MQ=255) gACCGGAAAATCGCTCTCGGACGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGCAGGTGATCCTGATTATcgccgc < 1:1494208/150‑1 (MQ=255) ccGGAAAATCGCTCTCGGACGCCAGTGCGGCGATCGCTCGCGCAATGACCCAGCTTGGTGTGCCTTCGCCGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGCAGGTGATCCTGATTATcgccgcaa > 1:1600833/1‑148 (MQ=255) ggAAAATCGCTCTCGGACGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGCCGATGAACTCGCAGGTGATCCTGATTATCGCCGCCATc > 1:1174445/1‑150 (MQ=255) ggAAAATCGCTCTCGGACGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGCAGGTGATCCTGATTATCGCCGCCATc > 1:655441/1‑150 (MQ=255) gAAACTCGCTCTCGGACGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCTTTGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCATGTGTTGCAGGAGACGATGAACTCGCAGGTGATCCTGATTATCGCCGCCATCg < 1:114748/150‑1 (MQ=255) gAAAATCGCTCTCGGACGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGCAGGTGATCCTGATTATCGCCGCCATCg < 1:578503/150‑1 (MQ=255) aaaaTCGCTCTCGGACGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGCAGGTGATCCTGATTATCGCCGCCATCGc < 2:1106827/150‑1 (MQ=255) tCGCTCTCGGACGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGCAGGTGATCCTGATTATCGCCGCCATCGCCACg < 1:1421684/150‑1 (MQ=255) ctctCGGCCGCCAGTGCGGCGATCGATCGCGCAATGACCCCGCTTGGTGTGCCTTCGCCGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCCGGAGTCGCTGAACTCGCAGGTGATCCTGCTTATCGCCGCCCTCGCCACGgtg > 1:1260557/1‑150 (MQ=255) ctctCGGACGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGCAGGTGATCCTGATTATCGCCGCCATCGCCACGgtg > 1:1677516/1‑150 (MQ=255) ctctCGGACGCCAGTGCGGCGAACGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGCAGGTGATCCTGATTATCGCCGCCATCGCCACGgtg < 2:763833/150‑1 (MQ=255) ctcGGACGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCTTGGTGGGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGCAGGTGATCCTGATTATCGCCGCCATCGCCACGGTGta < 1:923241/150‑1 (MQ=255) cGGACGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCTTTGTGTGCCTTCGACGGTGCGCGGCAGGTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGCAGGTGATCCTGATTATCGCCGCCATCGCCACGGTGtata < 1:1306733/150‑1 (MQ=255) cGGACGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGCAGGTGATCCTGATTATCGCCGCCATCGCCACGGTGtata > 2:1150537/1‑150 (MQ=255) cGGACGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCGTGGGGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGCAGGTGATCCTGATTATCGCCGCCATCGCCACGGTGtata < 1:781899/150‑1 (MQ=255) cGGACGACAGGGCGGCGATCGATCGCGCAATGACCCAGCTTGGTGGGCCTTCGCCGGTGGGCGGCAGTTTTGCCGGCAGGGCGCAGGTGTTCCAGGAGACGATTAACTCGCAGGTGATCCTGATTATCGCCGCCATCGCCACGGTGtata < 2:1057242/150‑1 (MQ=255) ggACGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGCAGGTGATCCTGATTATCGCCGCCATCGCCACGGTGTatat < 2:909469/150‑1 (MQ=255) ccGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGCAGGTGATCCTGATTATCGCCGCCATCGCCACGGTGTATATCg < 1:189841/149‑1 (MQ=255) cGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGCAGGTGATCCTGATTATCGCCGCCATCGCCACGGTGTATATCGt > 1:1685972/1‑150 (MQ=255) ccAGTGCGGCGATCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGCAGGTGATCCTGATTATCGCCGCCATCGCCACGGTGTATATCGTGc < 1:332726/150‑1 (MQ=255) cgTGCGGCGATCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGGGTTCCAGGAGACGATGAACTCGCAGGTGATCCTGATTATCGCCGCCATCGCCACGGTGTATATCGTGCTg < 1:550330/149‑1 (MQ=255) ggcggcgATCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGCAGGTGATCCTGATTATCGCCGCCATCGCCACGGTGTATATCGTGCTggg < 2:7584/149‑1 (MQ=255) cggcgATCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGCAGGTGATCCTGATTATCGCCGCCATCGCCACGGTGTATATCGTGCTGGGTa < 1:633289/150‑1 (MQ=255) cggcgATCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGCAGGTGATCCTGATTATCGCCGCCATCGCCACGGTGTATATCGTGCTGGGTa > 1:1667107/1‑150 (MQ=255) cggcgATCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGCAGGTGATCCTGATTATCGCCGCCATCGCCACGATATACACCGTggcgatgg < 1:1561298/150‑8 (MQ=255) gcgATCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGCAGGTGATCCTGATTATCGCCGCCATCGCCACGGTGTATATCGTGCTGGGTATc > 1:80952/1‑150 (MQ=255) gatcgatcGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGCAGGTGATCCTGATTATCGCCGCCATCGCCACGGTGTATATCGTGCTGGGTATCCt < 1:450503/150‑1 (MQ=255) cgatcgCGCATTGACCCAGCGTGGTGTTCCATCGCCGGTGCGCGTCAGTGTTGCCGGCACGGCGCAGGTGGTCCAGGAGACGATGAACTCGCAGGTGATCCTGATTATCGCCGCCATCGCCACGGTGTATATCGTGCTGGGTATCCTTTa < 1:1061961/150‑1 (MQ=255) gatcgCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGCAGGTGATCCTGATTATCGCCGCCATCGCCACGGTGTATATCGTGCTGGGTATCCTTTAc > 2:855380/1‑150 (MQ=255) ttcgCGCAATGACCCATGTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGTGACGATGAACTCGGAGGTGATCCTGATTATCGCCGCCATCGCCACGGTGTATATCGTGCTGGGTATCCTTTACg < 1:197985/149‑1 (MQ=255) cgcgCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGCAGGTGATCCTGATTATCGCCGCCATCGCCACGGTGTATATCGTGCTGGGTATCCTTTACgag < 2:1522929/150‑1 (MQ=255) gcgcAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGCAGGTGATCCTGATTATCGCCGCCATCGCCACGGTGTATATCGTGCTGGGTATCCTTTACgaga > 2:383782/1‑150 (MQ=255) cAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGCAGGTGATCCTGATTATCGCCGCCATCGCCACGGTGTATATCGTGCTGGGTATCCTTTACGAGAGtt > 1:1122351/1‑150 (MQ=255) aaTGACCCAGCTTGGTGCGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGCAGGTGATCCTGATTATCGCCGCCATCGCCACGGTGTATATCGTGCTGGGTATCCTTTACGAGAGTTa < 1:1344082/150‑1 (MQ=255) aCCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGTCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGCAGGTGATCCTGATTATCGCCGCCATCGCCACGGTGTATATCGTGCTGGGTATCCTTTACGAGAGTTACGTa < 1:1752019/150‑1 (MQ=255) cccAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGCAGGTGATCCTGATTATCGCCGCCATCGCCACGGTGTATATCGTGCTGGGTATCCTTTACGAGAGTTACGTAc < 2:1393847/150‑1 (MQ=255) ccAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGCAGGTGATCCTGATTATCGCCGCCATCGCCACGGTGTATATCGTGCTGGGTATCCTTTACGAGAGTTACGTACa < 1:112650/150‑1 (MQ=255) aGCTTGGGGTGCCTTCGACGGGGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGCAGGTGATCCTGATTATCGCCGCCATCGCCACGGTGTATATCGTGCTGGGTATCCTTTACGAGAGTTACGTACATc < 1:398422/150‑1 (MQ=255) ggTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGCAGGTGATCCTGATTATCGCCGCCATCGCCACGGTGTATATCGTGCTGGGTATCCTTTACGAGAGTTACGTACATCCGCTg < 2:629033/150‑1 (MQ=255) ggTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGCAGGTGATCCTGATTATCGCCGCCATCGCCACGGTGTATATCGTGCTGGGTATCCTTTACGAGAGTTACGTACATCCGCTg < 2:2054140/150‑1 (MQ=255) tgtgCCTTCGACGGTGCGCGGCTGTTGTGCCGGCACGGCGCAGGTGTTCGAGGAGACGATGAACTCGCAGGTGATCCTGATTATCGCCGCCATCGCCACGGTGTATATCGTGCTGGGTATCCTTTACGAGAGTTACGTACATCCGCTGAc < 2:143379/150‑1 (MQ=255) gCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGCAGGTGATCCTGATTATCGCCGCCATCGCCACGGTGTATATCGTGCTGGGTATCCTTTACGAGAGTTACGTACATCCGCTGACGAt < 1:245167/150‑1 (MQ=255) gCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGCAGGTGATCCTGATTATCGCCGCCATCGCCACGGTGTATATCGTGCTGGGTATCCTTTACGAGAGTTACGTACATCCGCTGACGAt > 2:536569/1‑150 (MQ=255) gCCTTCGACGGTGCGCGGAAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGCAGGTGATCCTGATTATCGCCGCCATCGCCACGGTGTATATCGTGCTGGGTATCCTTTACGAGAGTTACGTACATCCGCTGACGAt < 2:1594871/150‑1 (MQ=255) ccTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGCAGGTGATCCTGATTATCGCCGCCATCGCCACGGTGTATATCGTGCTGGGTATCCTTTACGAGAGTTACGTACATCCGCTGACGAtt > 2:1725665/1‑150 (MQ=255) cTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGCAGGTGATCCTGATTATCGCCGCCATCGCCACGGTGTATATCGTGCTGGGTATCCTTTACGAGAGTTACGTACATCCGCTGACGATtc > 1:577013/1‑150 (MQ=255) | ATGGCAACCGGCGAATGCCCCACTATCGGTGAATCATCAGGGATTATCGGCGGCCTCGACCATTTCGTTTAACCTGCCGACCGGAAAATCGCTCTCGGACGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGCAGGTGATCCTGATTATCGCCGCCATCGCCACGGTGTATATCGTGCTGGGTATCCTTTACGAGAGTTACGTACATCCGCTGACGATTC > NC_000913/2160734‑2161026 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |