BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,967,449	C→T	L345F (CTC→TTC)	rho →	transcription termination factor

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,967,449	0	C	T	100.0%	578.3 / NA	166	L345F (CTC→TTC)	rho	transcription termination factor
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (79/87); total (79/87)

Only 100 of 176 total aligned reads displayed.

CGTCCGAAACGCTTCTTTGGTGCGGCGCGTAACGTGGAAGAGGGCGGCAGCCTGACCATTATCGCGACGGCGCTTATCGATACCGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACCTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCGTTCTGGTACCCGTAAAGAAGAGCTGCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATC  >  NC_000913/3967302‑3967595

cGTCCGAAACGCTTCTTTGGTGCGGCGCGTAACGTGGAAGAGGGCGGCAGCCTGACCATTATCGCGACGGCGCTTATCGATACCGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACttc                                                                                                                                                  >  1:1117602/1‑150 (MQ=255)

cGTCCGAAACGCTTCTATGGTGCGGCGCGTAACGTGGAAGAGGGCGGCAGCCTGACCATTATCGCGCCGGCGCTTATCGAAACCGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACGGGCAACATGGAACTGCACttc                                                                                                                                                  >  1:1563847/1‑150 (MQ=255)

 gTCCGAAACGCTTCTTTGGTGCGGCGCGTAACGTGGAAGAGGGCGGCAGCCTGACCATTATCGCGACGGCGCTTATCGATACCGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACttct                                                                                                                                                 >  1:661704/1‑150 (MQ=255)

   ccGAAACGCTTCTTTGGTTCGTCGCGTAACGTGGAAGAGGGCGGCAGCCTGACCATTATCGCGACGGCGCTTATCGATACCGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACttctct                                                                                                                                               <  2:182414/150‑1 (MQ=255)

   ccGAAACGCTTCTTTGGTGCGGCGCGTAACGTGGAAGAGGGCGGCAGCCTGACCATTATCGCGACGGCGCTTATCGATACCGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTTTAAATGTACCGGCAACATGGAACTGCACttctct                                                                                                                                               >  2:203518/1‑150 (MQ=255)

   ccGAAACGCTCCTTTGGTGCGGCGCGTAACGTGGAAGAGGGCGGCAGCCTGACCATTATCGCGACGGCGCTTATCGATACCGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACttctct                                                                                                                                               >  2:1603295/1‑150 (MQ=255)

    cGAAACGCTTCTTTGGTGCGGCGCGTAACGTGGAAGAGGGCGGCAGCCTGACCATTATCGCGACGGCGCTTATCGATACCGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTtctctc                                                                                                                                              >  2:1713908/1‑150 (MQ=255)

       aaCGCTTCTTTGGTGCGGCGCGTAACGTGGAAGAGGGCGGCAGCCTGACCATTATCGCGACGGCGCTTATCGATACCGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTa                                                                                                                                           <  1:964653/150‑1 (MQ=255)

       aaCGCTTCTTTGGTGCGGCGCGTAACGTGGAAGAGGGCGGCAGCCAGACCATTATCGAGAAGGCGCTTATATATACCGGTTCTAAAATTGACGATGTTATCTACGAATATTTTAAAGGTACATGCAACATGGATCTGCACTTCTCTCGTa                                                                                                                                           >  1:1093021/1‑150 (MQ=255)

         cGCTTCTTTGGTGCGGCGCGTAACGTGGAAGAGGGCGGCAGCCTGACCATTATCGCGACGGCGCTTATCGATACCGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTaat                                                                                                                                         >  2:1150967/1‑149 (MQ=255)

         cGCTTCTTTGGTGCGGCGCGTAACGTGGAAGAGGGCGGCAGCCTGACCATTATCGCGACGGCGCTTATCGATACCGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAg                                                                                                                                         <  2:1296827/150‑1 (MQ=255)

          gCTTCTTTGGTGCGGCGCGTAACGTGGAAGAGGGCGGCAGCCTGACCATTATCGCGACGGCGCTTATCGATACCGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGa                                                                                                                                        >  1:468180/1‑150 (MQ=255)

           cttcttTGGTGCGGCGCGTAACGTGGAAGAGGGCGGCAGCCTGACCATTATCGCGACGGCGCTTATCGATACCGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGAt                                                                                                                                       >  2:1977216/1‑150 (MQ=255)

              cttTGGTGCGGCGCGTAACGTGGAAGAGGGCGGCAGCCTGACCATTATCGCGACGGCGCTTATCGATACCGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGc                                                                                                                                    >  2:426796/1‑150 (MQ=255)

                   gggcggcgCGTAACGTGGAAGAGGGCGGCAGCCTGACCATTATCGCGACGGCGCTTATCGATACCGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGaaa                                                                                                                               <  1:1941874/148‑1 (MQ=255)

                   gTGCGGCGCGTAACGTGGAAGAGGGCGGCAGCCTGACCATTATCGCGACGGCGCTTATCGATACCGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGaaa                                                                                                                               >  2:1153731/1‑150 (MQ=255)

                   gTGCGGCGCGTAACGTGGAAGAGGGCGGCAGCCTGACCATTATCGCGACGGCGCTTATCGATACCGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGaaa                                                                                                                               <  2:536627/150‑1 (MQ=255)

                     gcggcgCGTAACGTGGAAGAGGGCGGCAGCCTGACCATTATCGCGACGGCGCTTATCGATACCGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTg                                                                                                                                  <  1:1000185/145‑1 (MQ=255)

                      cggcgCGTAACGTGGAAGAGGGCGGCAGCCTGACCATTATCGCGACGGCGCTTATCGATACCGGTTCT‑AAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAAcg                                                                                                                           <  1:459440/150‑1 (MQ=255)

                       ggcgCGTTACGTGGAAGAGGGCGGCAGCCTGACCATTATCGCGACGGCGCTTATCGATACCGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAAcg                                                                                                                           <  1:219199/150‑1 (MQ=255)

                       ggcgCGTAACGTGGAAGAGGGCGGCAGCCTGACCATTATCGCGACGGCGCTTATCGATACCGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGTCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAAcg                                                                                                                           <  1:319375/150‑1 (MQ=255)

                       ggcgCGTAACGTGGAAGAGGGCGGCAGCCTGACCATTATCGCGACGGCGCTTATCGATACCGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAAcg                                                                                                                           >  1:1876524/1‑150 (MQ=255)

                             tAACGTGGAAGAGGGCGGCAGCCTGACCATTATCGCGACGGCGCTTATCGATACCGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCtt                                                                                                                     >  2:1761128/1‑150 (MQ=255)

                                cGTGGAAGAGGGCGGCAGCCTGACCATTATCGCGACGGCGCTTATCGATACCGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTccc                                                                                                                  >  2:510448/1‑150 (MQ=255)

                                cGTGGAAGAGGGCGGCAGCCTGACCATTATCGCGACGGCGCTTATCGATACCGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTccc                                                                                                                  >  2:1026382/1‑150 (MQ=255)

                                  tGGAAGAGGGCGGCAGCCTGACCATTATCGCGACGGCGCTTATCGATACCGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCgg                                                                                                                >  2:679803/1‑150 (MQ=255)

                                   ggAAGAGGGCGGCAGCCTGACCATTATCGCGACGGCGCTTAGCGATACGGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGc                                                                                                               <  1:1340396/150‑1 (MQ=255)

                                    gAAGAGGGCGGCAGCCTGACCATTATCGCGACGGCGCTTATCGATACCGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCt                                                                                                              <  1:126141/150‑1 (MQ=255)

                                         gggCGGCAGCCTGACCATTATCGCGACGGCGCTTATCGATACCGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGa                                                                                                         >  2:1193073/1‑150 (MQ=255)

                                          ggcggcAGCCTGACCATTATCGCGACGGCGCTTATCGATACCGGTTATAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGAc                                                                                                        <  2:1734956/150‑1 (MQ=255)

                                           gcggcAGCCTGACCATTATCGCGACGGCGCTTATCGATACCGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACt                                                                                                       >  2:700652/1‑150 (MQ=255)

                                           gcggcAGCCTGACCATTATCGCGACGGCGCTTATCGATACCGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACt                                                                                                       >  2:208222/1‑150 (MQ=255)

                                              gcAGCCTGACCATTATCGCGACGGCGCTTATCGATACCGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACa                                                                                                    >  2:1492478/1‑150 (MQ=255)

                                              gcAGCCTGACCATTATCGCGACGGCGCTTATCGATACCGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACa                                                                                                    >  1:1235336/1‑150 (MQ=255)

                                              gcAGCCTGACCATTATCGCGACGGCGCTTATCGATACCGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACa                                                                                                    <  2:760478/150‑1 (MQ=255)

                                                aGCCTGACCATTATCGCGACGGCGCTTATCGATACCGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAAc                                                                                                  <  2:1267522/150‑1 (MQ=255)

                                                  ccTGACCATTATCGCGACGGCGCTTATCGATACCGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCg                                                                                                >  2:1269689/1‑150 (MQ=255)

                                                  ccTGACCATTATCGCGACGGCGCTTATCGATACCGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCg                                                                                                <  2:1998156/150‑1 (MQ=255)

                                                   cTGACCATTATCGCGACGGCGCTTATCGATACCGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCGt                                                                                               >  1:1900095/1‑150 (MQ=255)

                                                     gACCATTATCGCGACGGCGCTTATCGATACCGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCGTTc                                                                                             <  2:299257/150‑1 (MQ=255)

                                                     gACCATTATCGCGACGGCGCTTATCGATACCGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCGTTc                                                                                             <  1:1844956/150‑1 (MQ=255)

                                                     gACCATTATCGCGACGGCGCTTATCGATACCGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCGTTc                                                                                             <  2:805581/150‑1 (MQ=255)

                                                      aCCATTATCGCGACGGCGCTTATCGATACCGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCGTTCt                                                                                            <  2:1055268/150‑1 (MQ=255)

                                                       ccATTATCGCGACGGCGCTTATCGATACCGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCGTTCTg                                                                                           <  2:224216/150‑1 (MQ=255)

                                                         aTTATCGCGACGGCGGTTATCGATACCGGTGCTTAAATGTACGAAGTTATCTTCGAAGAGTTTATAGGTACAGGTAACATTGACCTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTCCAACCGTTCTGGt                                                                                         <  1:12928/150‑1 (MQ=255)

                                                         aTTATCGCGACGGCGCTTATCGATACCGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCGTTCTGGt                                                                                         <  1:290657/150‑1 (MQ=255)

                                                            aTCGCGACGGCGCTTATCGATACCGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCGTTCTGGTAcc                                                                                      <  2:871823/150‑1 (MQ=255)

                                                              cgcgACGGCGCTTATCGATACCGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCGTTCTGGCACCCg                                                                                    <  2:827205/150‑1 (MQ=255)

                                                                   cGGCGCTTATCGAGACCGGTTCTAAAATGGACGAAGTGATCTACTAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCACGTAAGATCGCGTAAACACGCGTCTTCACGGCTTTCGACTACAACCGTACAGGTTCCCGTAtag                                                                               >  2:308896/1‑150 (MQ=255)

                                                                    ggCGCTTATCGATACCGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCGTTCTGGTACCCGTAaaga                                                                              <  1:208222/150‑1 (MQ=255)

                                                                         ttATCGATACCGGTTCTAATATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCGTTCTGGTACCCGTAAAGAAGAgc                                                                         <  1:153503/150‑1 (MQ=255)

                                                                         ttATCGATACCGGTTCTAAAATGTACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCGTTCTGGTACCCGTAAAGAAGAgc                                                                         <  1:407687/150‑1 (MQ=255)

                                                                          tATCGATACCGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACACCCGTTCTGGTACCCGTAAAGAAGAgcg                                                                        >  2:1684426/1‑149 (MQ=255)

                                                                           aTCGATACCGGGTCTTAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTTATCGCGGCTATGGTCTACATCCGTTCTGGTACCCGTAAAGTAGAgctg                                                                       <  2:1579907/150‑1 (MQ=255)

                                                                            tCGATACCGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCGTGCTGGTACCCGTAAAGAAGAgctgc                                                                      <  1:309549/150‑1 (MQ=255)

                                                                             cGATACCGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCGTTCTGGTACCCGTAAAGAAGAgctgct                                                                     >  1:997634/1‑150 (MQ=255)

                                                                             cGATACCGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTGTAAAGGTACAGGCAACATTGATCTGCACTTCTCTCGTAAGAGCACTGAAAAACGCGAGTTCCAGGCAATCGACTAACACCGTTCTGGTCCCCGTAATGAAGAgcttct                                                                     >  1:301999/1‑150 (MQ=255)

                                                                               aTACCGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCGTTCTGGTACCCGTAAAGAAGAGCTGCTCa                                                                   <  1:1997508/150‑1 (MQ=255)

                                                                                tACCGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACACCCGTTCTGGTACCCGTAAAGACGAgctgcgccc                                                                  >  1:265155/1‑146 (MQ=255)

                                                                                tACCGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCGTTCTGGTACCCGTAAAGAAGAGCTGCTCAc                                                                  <  1:634983/150‑1 (MQ=255)

                                                                                        ttAAAATGTAGGATGTTATCTTCTATGAGTTTAATGGTACAGGCAACTTGGAACTGCAGTTATCTATTAATATCGATGAAAAACGGTTCTTCCCGTCTATCGACTACAACCGTTGTGGTACCCGTAAAGAAGAGCTGCTCACGACTCAgg                                                          <  2:591858/149‑1 (MQ=255)

                                                                                        cTAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCGTTCTGGTACCCGTAAAGAAGAGCTGCTCACGACTCAgg                                                          <  1:1317998/150‑1 (MQ=255)

                                                                                        atAAAATGTACTAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCGTTCTGGTACCCGTAAAGAATAGCTGCTCACGACTCAgg                                                          <  1:1604138/149‑1 (MQ=255)

                                                                                              tGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCGTTCTGGTACCCGTAAAGAAGAGCTGCTCACGACTCAGGAAGAAc                                                    >  1:1014533/1‑150 (MQ=255)

                                                                                                gACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCGTTCTGGTACCCGTAAAGAAGAGCTGCTCACGACTCAGGAAGAACTg                                                  <  2:1896894/150‑1 (MQ=255)

                                                                                                gACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTATCGTAAGATATCTGAAAAACTCGTCTTACAGGCTATCGACTACAACCGTTCTGGTACCAGTAAAGAAGAGCTGCTCACGACTCAGGAAGAACta                                                  >  1:212362/1‑149 (MQ=255)

                                                                                                         aTCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCGTTCTGGTACCCGTAAAGAAGAGCTGCTCACGACTCAGGAAGAACTGCAGAAAAtg                                         >  1:27186/1‑150 (MQ=255)

                                                                                                           cTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATTGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCGTTCTGGTACCCGTAAAGAAGAGCTGCTCACGCCTCAGGAAGAACTGCAGAAAAtgtg                                       >  2:1731490/1‑150 (MQ=255)

                                                                                                           cTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCGTTCTGGTACCCGTAAAGAAGAGCTGCTCACGACTCAGGAAGAACTGCAGAAAAtgtg                                       <  2:1876524/150‑1 (MQ=255)

                                                                                                            tACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCGTTCTGGTACCCGTAAAGAAGAGCTGCTCACGACTCAGGAAGAACTGAAGaaaaggggg                                      >  2:608712/1‑145 (MQ=255)

                                                                                                             aCGATGAGTTTAAAGGTACAGGCAACATTGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCGTTCTTGTACCCGTAAAGAAGAGCTGCTCACGACTCAGGAAGAACTGCAGAAAATGTGGa                                     <  1:557422/150‑1 (MQ=255)

                                                                                                               gAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCGTTCTGGTACCCGTAAAGAAGAGCTGCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATc                                   >  1:899857/1‑150 (MQ=255)

                                                                                                               gAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCGTTCTGGTACCCGTAAAGAAGAGCTGCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATc                                   <  1:426796/150‑1 (MQ=255)

                                                                                                                aaGAGTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCGTTCTGGTACCCGTAAAGAAGAGCTGCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATcc                                  >  2:459811/1‑150 (MQ=255)

                                                                                                                    gTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCGTTCTGGTACCCGTAAAGAAGAGCTGCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTgcg                              >  1:877201/1‑150 (MQ=255)

                                                                                                                    gTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCGTTCTGGTACCCGTAAAGAAGAGCTGCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTgcg                              >  1:1695753/1‑150 (MQ=255)

                                                                                                                    gTTTAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCGTTCAGGTACCCGTAAAGAAGAGCTGCTCACGACTCAGGAAGCACTGCAGAAAATGTGGATCCTgcg                              >  1:806188/1‑150 (MQ=255)

                                                                                                                      ttAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCGTACAGGTACCCGTAAAGAAGAGCTGCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCa                            >  2:91823/1‑150 (MQ=255)

                                                                                                                       tAAAGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCGTTCTGGTACCCGTAAAGAAGAGCTGCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCaa                           >  1:1667693/1‑150 (MQ=255)

                                                                                                                        aaaGGTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCGTTCTGGTACCCGTAAAGAAGAGCTGCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCaaa                          >  2:851011/1‑150 (MQ=255)

                                                                                                                          ccgTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCGGAAAAACGCGTCTTCCCGGCTATCGACTACAACCGTTCTGGTACCCGTAAAGAAGAGCTGCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAAt                        <  1:828072/148‑1 (MQ=255)

                                                                                                                           ggTACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCGTTCTGGTACCCGTAAAGAAGAGCTGCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATc                       >  1:329563/1‑150 (MQ=255)

                                                                                                                             tACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACACCCGTTCTGGTACACGTAAAGAAGAGCTGCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCAt                     >  2:1345427/1‑150 (MQ=255)

                                                                                                                             tACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCGTTCTGGTACCCGTAAAGAAGAGCTGCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCAt                     >  1:1717968/1‑150 (MQ=255)

                                                                                                                             tACAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCGTTCTGGTACCCGTAAAGAAGAGCTGCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCAt                     <  1:1437854/150‑1 (MQ=255)

                                                                                                                              aCAGGCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCGTTCTGGTACCCGTAAAGAAGAGCTGCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCAtt                    <  1:1977216/150‑1 (MQ=255)

                                                                                                                               cAGGCAACATGCAACTGAACTTCTCTAGTAAGATCGCTGAAAAACGAGTATTCCCGGCTATCGACTACAACCTTTATGGTACCCGTAAAGAAGAGCTGCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTc                   <  1:998401/150‑1 (MQ=255)

                                                                                                                                 ggCAACATGTAACTGAACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCTGCTATCGACTACAACCGTTCTGGTACCCGTAAATAAGAGCTGCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCAc                 <  2:1861919/150‑1 (MQ=255)

                                                                                                                                 ggCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCGTTCTGGTACCCGTAAAGAAGAGCTGCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCAc                 >  2:238322/1‑150 (MQ=255)

                                                                                                                                 ggCAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCGTTCTGATACCCGTAAAGAAGAGCTGCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCAc                 >  2:1225208/1‑150 (MQ=255)

                                                                                                                                   cAACATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCAAGCGACTACACCCGTGCTGGAACCCGAAAAGAAGAGCTCCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCAccc               >  2:1274829/1‑150 (MQ=255)

                                                                                                                                    aaCATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCGTTCTGGTACCCGTAAAGAAGAGCTGCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCg              >  1:1418377/1‑150 (MQ=255)

                                                                                                                                      cATGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCGTTCTGGTACCCGTAAAGAAGAGCTGCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGAt            <  1:1191556/150‑1 (MQ=255)

                                                                                                                                       aTGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCGTTCTGGTACCCGTAAAGAAGAGCTGCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATg           <  1:679803/150‑1 (MQ=255)

                                                                                                                                        tGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCGTTCTGGTACCCGTAAAGAAGAGCTGCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTTCGCAAAATCATTCACCCGAggg          >  2:975032/1‑150 (MQ=255)

                                                                                                                                        tGGAACTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCGTTCTGGTACCCGTAAAGAAGAGCTGCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATgg          >  2:1584054/1‑150 (MQ=255)

                                                                                                                                             cTGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCGTTCTGGTACCCGTAAAGAAGAGCTGCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGaa     >  1:731900/1‑150 (MQ=255)

                                                                                                                                              tGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCGTTCTGGTACCCGTAAAGACGAGCTGCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGaaa    <  1:1805537/150‑1 (MQ=255)

                                                                                                                                              tGCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCGTTCTGGTACCCGTAAAGAAGAGCTGCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGCTGGGCGaaa    >  1:804300/1‑150 (MQ=255)

                                                                                                                                               gCACTTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCGTTCTGGTACCCGTAAAGAAGAGCTGCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAAt   >  2:1364333/1‑150 (MQ=255)

CGTCCGAAACGCTTCTTTGGTGCGGCGCGTAACGTGGAAGAGGGCGGCAGCCTGACCATTATCGCGACGGCGCTTATCGATACCGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACCTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCGTTCTGGTACCCGTAAAGAAGAGCTGCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATC  >  NC_000913/3967302‑3967595

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`