| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4578923 = | 437 (0.900) | 5 (0.010) | 3/266 | NT | 1.2% | coding (415/1380 nt) | mcrB | 5‑methylcytosine‑specific restriction enzyme McrBC, subunit McrB |
| ? | NC_000913 | 4579019 = | 377 (0.810) | coding (319/1380 nt) | mcrB | 5‑methylcytosine‑specific restriction enzyme McrBC, subunit McrB | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CCACATGCCCAATGGCAGTTCTCTTCAGACATACCTAAAACAATCGCAGAGTATTTTCAGGCAACTTCGGGTGTATATCCTAAAAAATACGGACAGTCCTATTACGCCTGTTCCCAAAAAGTCTCACAGGGTATTGATTACACCCGATTTGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4579076‑4578923‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgcctGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCATAAGCCAAAACCAACTCATCAAAATCTTTATAATAGAGAATAACGGGATATATACCGTTAGAAGCTTCC > NC_000913/4579019‑4579167 CCACATGCCCAATGGCAGTTCTCTTCAGACATACCTAAAACAATCGCAGAGTATTTTCAGGCAACTTCGGGTGTATATCCTAAAAAATACGGACAGTCCTATTACGCCTGTTCCCAAAAAGTCTCACAGGGTATTGATTACACCCGATTT > 2:2483170/1‑150CCACATGCCCAATGGCAGTTCTCTTCAGACATACCTAAAACAATCGCAGAGTATTTTCAGGCAACTTCGGGTGTATATCCTAAAAAATACGGACAGTCCTATTACGCCTGTTCCCAAAAAGTCTCACAGGGTATTGATTACACCCGATTT > 1:2689400/1‑150CCACATGCCCAATGGCAGTTCTCTTCAGACATACCTAAAACAATCGCAGAGTATTTTCAGGCAACTTCGGGTGTATATCCTAAAAAATACGGACAGTCCTATTACGCCTGTTCCCAAAAAGTCTCACAGGGTATTGATTACACCCGATTT < 1:4152861/150‑1CCACATGCCCAATGGCAGTTCTCTTCAGACATACCTAAAACAATCGCAGAGTATTTTCAGGCAACTTCGGGTGTATATCCTAAAAAATACGGACAGTCCTATTACGCCTGTTCCCAAAAAGTCTCACAGGGTATTGATTACACCCGATTT < 1:4153385/150‑1CCACATGCCCAATGGCAGTTCTCTTCAGACATACCTAAAACAATCGCAGAGTATTTTCAGGCAACTTCGGGTGTATATCCTAAAAAATACGGACAGTCCTATTACGCCTGTTCCCAAAAAGTCTCACAGGGTATTGATTACACCCGATTT < 1:7909059/150‑1CCACATGCCCAATGGCAGTTCTCTTCAGACATACCTAAAACAATCGCAGAGTATTTTCAGGCAACTTCGGGTGTATATCCTAAAAAATACGGACAGTCCTATTACGCCTGTTCCCAAAAAGTCTCACAGGGTATTGATTACACCCGATTT > 2:6103022/1‑150CCACATGCCCAATGGCAGTTCTCTTCAGACATACCTAAAACAATCGCAGAGTATTTTCAGGCAACTTCGGGTGTATATCCTAAAAAATACGGACAGTCCTATTACGCCTGTTCCCAAAAAGTCTCACAGGGTATTGATTACACCCGATTT > 2:4318717/1‑150CCACATGCCCAATGGCAGTTCTCTTCAGACATACCTAAAACAATCGCAGAGTATTTTCAGGCAACTTCGGGTGTATATCCTAAAAAATACGGACAGTCCTATTACGCCTGTTCCCAAAAAGTCTCACAGGGTATTGAGTACACCCGATTT > 2:3086071/1‑150 CACATGCCCAATGGCAGTTCTCTTCAGACATACCTAAAACAATCGCAGAGTATTTTCAGGCAACTTCGGGTGTATATCCTAAAAAATACGGACAGTCCTATTACGCCTGTTCCCAAAAAGTCTCACAGGGTATTGATTACACCCGATTTG > 2:7127118/1‑150 ACATGCCCAATGGCAGTTCTCTTCAGACATACCTAAAACAATCGCAGAGTATTTTCAGGCAACTTCGGGTGTATATCCTAAAAAATACGGACAGTCCTATTACGCCTGTTCCCAAAAAGTCTCACAGGGTATTGATTACACCCGATTTGC < 1:6301671/150‑1 ACATGCCCAATGGCAGTTCTCTTCAGACATACCTAAAACAATCGCAGAGTATTTTCAGGCAACTTCGGGTGTATATCCTAAAAAATACGGACAGTCCTATTACGCCTGTTCCCAAAAAGTCTCACAGGGTATTGATTACACCCGATTTGC < 2:3623878/150‑1 ACATGCCCAATGGCAGTTCTCTTCAGACATACCTAAAACAATCGCAGAGTATTTTCAGGCAACTTCGGGTGTATATCCTAAAAAATACGGACAGTCCTATTACGCCTGTTCCCAAAAAGTCTCACAGGGTATTGATTACACCCGATTTGC < 1:942766/150‑1 ACATGCCCAATGGCAGTTCTCTTCAGACATACCTAAAACAATCGCAGAGTATTTTCAGGCAACTTCGGGTGTATATCCTAAAAAATACGGACAGTCCTATTACGCCTGTTCCCAAAAAGTCTCACAGGGTATTGATTACACCCGATTTGC < 2:410131/150‑1 ACATGCCCAATGGCAGTTCTCTTCAGACATACCTAAAACAATCGCAGAGTATTTTCAGGCAACTTCGGGTGTATATCCTAAAAAATACGGACAGTCCTATTACGCCTGTTCCCAAAAAGTCTCACAGGGTATTGATTACACCCGATTTGC < 1:7647546/150‑1 ACATGCCCAATGGCAGTTCTCTTCAGACATACCTAAAACAATCGCAGAGTATTTTCAGGCAACTTCGGGTGTATATCCTAAAAAATACGGACAGTCCTATTACGCCTGTTCCCAAAAAGTCTCACAGGGTATTGATTACACCCGATTTGC > 1:7066449/1‑150 ACATGCCCAATGGCAGTTCTCTTCAGACATACCTAAAACAATCGCAGAGTATTTTCAGGCAACTTCGGGTGTATATCCTAAAAAATACGGACAGTCCTATTACGCCTGTTCCCAAAAAGTCTCACAGGGTATTGATTACACCCGATTTGC < 1:6154659/150‑1 ACATGCCCAATGGCAGTTCTCTTCAGACATACCTAAAACAATCGCAGAGTATTTTCAGGCAACTTCGGGTGTATATCCTAAAAAATACGGACAGTCCTATTACGCCTGTTCCCAAAAAGTCTCACAGGGTATTGATTACACCCGATTTGC < 2:4558161/150‑1 ACATGCCCAATGGCAGTTCTCTTCAGACATACCTAAAACAATCGCAGAGTATTTTCAGGCAACTTCGGGTGTATATCCTAAAAAATACGGACAGTCCTATTACGCCTGTTCCCAAAAAGTCTCACAGGGTATTGATTACACCCGATTTGC > 1:469996/1‑150 ACATGCCCAATGGCAGTTCTCTTCAGACATACCTAAAACAATCGCAGAGTATTTTCAGGCAACTTCGGGTGTATATCCTAAAAAATACGGACAGTCCTATTACGCCTGTTCCCAAAAAGTCTCACAGGGTATTGATTACACCCGATTTGC < 2:6547210/150‑1 ACATGCCCAATGGCAGTTCTCTTCAGACATACCTAAAACAATCGCAGAGTATCTTCAGGCAACTTCGGGTGTATATCCTAAAAAATACGGACAGTCCTATTACGCCTGTTCCCAAAAAGTCTCACAGGGTATTGATTACACCCGATTTGC < 2:4558154/150‑1 ACATCCCCAATCGCAGTACTCTTCAGACATACCTAAAACAATCGCAGAGTAATTTCAGGCAACATCGGGTGTATATCCTAAAAAATACGGACAGTCCTATTACGCCTGTTCCCAAAAAGTCTCACAGGGTATTGATTACACCCGATTTGC < 2:3828920/150‑1 ATGCCCAATGGCAGTTCTCTTCAGACATACCTAAAACAATCGCAGAGTATTTTCAGGCAACTTCGGGTGTATATCCTAAAAAATACGGACAGTCCTATTACGCCTGTTCCCAAAAAGTCTCACAGGGTATTGATTACACCCGATTTGCCT > 1:7169241/1‑150 TTTTCAGGCAACTTCGGGTGTATATCCTAAAAAATACGGACAGTCCTATTACGCCTGTTCCCAAAAAGTCTCACAGGGTATTGATTACACCCGATTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTG > 1:1516746/1‑150 TTTTCAGGCAACTTCGGGTGTATATCCTAAAAAATACGGACAGTCCTATTACGCCTGTTCCCAAAAAGTCTCACAGGGTATTGATTACACCCGATTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTG > 1:1516351/1‑150 GCAACTTCGGGTGTATATCCTAAAAAATACGGACAGTCCTATTACGCCTGTTCCCAAAAAGTCTCACAGGGTATTGATTACACCCGATTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGT > 1:2481565/1‑150 TCCCAAAAAGTCTCACAGGGTATTGATTACACCCGATTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCATAAGCCAAAACCAACTCATCAAAATCT < 2:1516746/150‑1 TCCCAAAAAGTCTCACAGGGTATTGATTACACCCGATTTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCATAAGCCAAAACCAACTCATCAAAATCT < 2:1516351/150‑1 TTGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCATAAGCCAAAACCAACTCATCAAAATCTTTATAATAGAGAATAACGGGATATATACCGTTAGAAG < 2:2244073/150‑1 TGCCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCATAAGCCAAAACCAACTCATCAAAATCTTTATAATAGAGAATAACGGTATATATCCCGTTAttctc < 2:3215532/150‑6 CCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCATAAGCCAAAACCAACTCATCAAAATCTTTATAATAGAGAATAACGGGATATATACCGTTAGAAGCTT < 2:1859087/150‑1 CCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCATAAGCCAAAACCAACTCATCAAAATCTTTATAATAGAGAATAACGGGATATATACCGTTAGAAGCTT < 2:7185154/150‑1 CCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCATAAGCCAAAACCAACTCATCAAAATCTTTATAATAGAGAATAACGGGATATATACCGTTAGAAGCTT < 1:492720/150‑1 CCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCATAAGCCAAAACCAACTCATCAAAATCTTTATAATAGAGAATAACGGGATATATACCGTTAGAAGCTT < 2:347588/150‑1 CCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCATAAGCCAAAACCAACTCATCAAAATCTTTATAATAGAGAATAACGGGATATATACCGTTAGAAGCTT < 2:347597/150‑1 CCTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCATAAGCCAAAACCAACTCATCAAAATCTTTATAATAGAGAATAACGGGATATATACCGTTAGAAGCTT < 1:7656420/150‑1 CTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCATAAGCCAAAACCAACTCATCAAAATCTTTATAATAGAGAATAACGGGATATATACCGTTCGAAGCTTC > 2:7033915/1‑150 CTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCATAAGCCAAAACCAACTCATCAAAATCTTTATAATAGAGAATAACGGGATATATACCGTTAGAAGCTTC < 2:2921781/150‑1 CTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCATAAGCCAAAACCAACTCATCAAAATCTTTATAATAGAGAATAACGGGATATATACCGTTAGAAGCTTC < 2:7349408/150‑1 CTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCATAAGCCAAAACCAACTCATCAAAATCTTTATAATAGAGAATAACGGGATATATACCGTTAGAAGCTTC > 1:5750726/1‑150 CTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCATAAGCCAAAACCAACTCATCAAAATCTTTATAATAGAGAATAACGGGATATATACCGTTAGAAGCTTC > 1:6836634/1‑150 CTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCATAAGCCAAAACCAACTCATCAAAATCTTTATAATAGAGAATAACGGGATATATACCGTTAGAAGCTTC < 1:7274588/150‑1 CTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCATAAGCCAAAACCAACTCATCAAAATCTTTATAATAGAGAATAACGGGATATATACCGTTAGAAGCTTC < 2:3288756/150‑1 CTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCATAAGCCAAAACCAACTCATCAAAATCTTTATAATAGAGAATAACGGGATATATACCGTTAGAAGCTTC > 1:1343267/1‑150 CTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCATAAGCCAAAACCAACTCATCAAAATCTTTATAATAGAGAATAACGGGATATATACCGTTAGAAGCTTC > 2:301949/1‑150 CTGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCAGGGGGTTCATTCGTGTCGCTTATACCATAAGCCAAAACCAACTCATCAAAATCTTTATAATAGAGAATAACGGGATATATACCGTTAGAAGCTTC > 2:1956751/1‑150 TGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCATAATCCAAAACCAACTCATCAAAATCTTTATAATAGAGAATAACGGGATATATACCGTTAGAAGCTTCC > 2:3143902/1‑150 TGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCATAAGCCAAAACCAACTCATCAAAATCTTTATAATAGAGAATAACGGGATATATACCGTTAGAAGCTTCC > 1:7946429/1‑150 TGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCATAAGCCAAAACCAACTCATCAAAATCTTTATAATAGAGAATAACGGGATATATACCGTTAGAAGCTTCC > 1:4477523/1‑150 TGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCATAAGCCAAAACCAACTCATCAAAATCTTTATAATAGAGAATAACGGGATATATACAGTTAGAAGCTTCC > 1:4656723/1‑150 CCACATGCCCAATGGCAGTTCTCTTCAGACATACCTAAAACAATCGCAGAGTATTTTCAGGCAACTTCGGGTGTATATCCTAAAAAATACGGACAGTCCTATTACGCCTGTTCCCAAAAAGTCTCACAGGGTATTGATTACACCCGATTTGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4579076‑4578923‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgcctGAAAATACTCTGCGATTGTTTTAGGTATGTCTGAAGAGAACTGCCATTGGGCATGTGGTTCATTCGTGTCGCTTATACCATAAGCCAAAACCAACTCATCAAAATCTTTATAATAGAGAATAACGGGATATATACCGTTAGAAGCTTCC > NC_000913/4579019‑4579167 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |