New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 445266NA (NA)9 (0.020) 5/268 NT NA noncoding (67/87 nt) REP40 (repetitive extragenic palindromic) element; contains 2 REP sequences REP40 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 445281 NA (NA)noncoding (82/87 nt) REP40 (repetitive extragenic palindromic) element; contains 2 REP sequences REP40 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 510 total aligned reads displayed.

CGATCTCGGTCAGCCGTTCCAGTTCAAAAACTTCCGCGATTAATCGCGACTATGTGCGTTTTGTTCATGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTCACATAAGCTGAATGTTCTTCTTCTGCAATCAACACTTCTTTGATGCCTTCAGTTTCTAGCAAACGCAC  >  NC_000913/445132‑445430
                                                                                                                                                     |                                                                                                                                                     
 gATCTCGGTCAGCCGTTCCAGTTCAAAAACTTCCGCGATTAATCGCGACTATGTGCGTTTTGTTCATGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGc                                                                                                                                                      >  1:7167511‑M2/1‑149 (MQ=255)
  aTCTCGGTCAGCCGTTCCAGTTCAAAAACTTCCGCGATTAATCGCGACTATGTGCGTTTTGTTCATGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGca                                                                                                                                                     >  2:6286179‑M2/1‑148 (MQ=255)
  aTCTCGGTCAGCCGTTCCAGTTCAAAAACTTCCGCGATTAATCGCGACTATGTGCGTTTTGTTCATGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGca                                                                                                                                                     >  2:5271463‑M2/1‑148 (MQ=255)
     tcGGTCAGCCGTTCCAGTTCAAAAACTTCCGCGATTAATCGCGACTATGTGCGTTTTGTTCATGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGcaggc                                                                                                                                                  >  2:3715579‑M2/1‑145 (MQ=255)
       ggTCAGCCGTTCCAGTTCAAAAACTTCCGCGATTAATCGCGACTATGTGCGTTTTGTTCATGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCaa                                                                                                                                                <  2:3594208/150‑1 (MQ=255)
       ggTCAGCCGTTCCAGTTCAAAAACTTCCGCGATTAATCGCGACTATGTGCGTTTTGTTCATGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCaa                                                                                                                                                <  2:3867953/150‑1 (MQ=255)
          cAGCCGTTCCAGTTCAAAAACTTCCGCGATTAATCGCGACTATGTGCGTTTTGTTCATGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTc                                                                                                                                             <  2:5898535/150‑1 (MQ=255)
          cAGCCGTTCCAGTTCAAAAACTTCCGCGAGTAATCGCGACTATGTGCGTTTTGTTCATGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTc                                                                                                                                             <  2:7281373/150‑1 (MQ=255)
            gCCGTTCCAGTTCAAAAACTTCCGCGATTACTCGCGACTATGTGCGTTTTGTTCATGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTcgc                                                                                                                                           <  2:4291968/150‑1 (MQ=255)
            gCCGTTCCAGTTCAAAAACTTCCGCGATTAATCGCGACTATGTGCGTTTTGTTCATGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTcgc                                                                                                                                           <  1:1765914/150‑1 (MQ=255)
            gCCGTTCCAGTTCAAAAACTTCCGCGATTAATCGCGACTATGTGCGTTTTGTTCATGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTcgc                                                                                                                                           <  1:191514/150‑1 (MQ=255)
             ccGTTCCAGTTCAAAAACTTCCGCGATTAATCGCGACTATGTGCGTTTTGTTCATGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTcgcc                                                                                                                                          <  2:6852207/150‑1 (MQ=255)
                   cAGTTCAAACACTTCCGCGATTAATCGCGACTATGTGCGTTTTGTTCATGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGttt                                                                                                                                    <  2:4580784/150‑1 (MQ=255)
                   cAGTTCAAAAACTTCCGCGATTAATCGCGACTATGTGCGTTTTGTTCATGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGttt                                                                                                                                    >  1:4261686/1‑150 (MQ=255)
                     gTTCACAAACTTCCGCGATTAATCGCGACTATGTGCGTTTTGTTCATGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGttttt                                                                                                                                  <  1:7394234/150‑1 (MQ=255)
                     gTTCAAAAACTTCCGCGATTAATCGCGACTATGTGCGTTTTGTTCATGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGttttt                                                                                                                                  <  1:3291301/150‑1 (MQ=255)
                     gTTCAAAAACTTCCGCGATTAATCGCGACTATGTGCGTTTTGTTCATGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGttttt                                                                                                                                  <  2:4778241/150‑1 (MQ=255)
                      ttCAAAAACTTCCGCGATTAATCGCGACTATGTGCGTTTTGTTCATGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGtttttt                                                                                                                                 <  2:3818056/150‑1 (MQ=255)
                       tCAAAAACTTCCGCGATTAATCGCGACTATGTGCGTTTTGTTCATGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTa                                                                                                                                <  1:2595331/150‑1 (MQ=255)
                       tCAAAAACTTCCGCGATTAATCGCGACTATGTGCGTTTTGTTCATGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGAGCAGCAGGCAATTCGCCGCGTTTTTTa                                                                                                                                >  2:2354347/1‑150 (MQ=255)
                         aaaaaCTTCCGCGATTAATCGCGACTATGTGCGTTTTGTTCATGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATg                                                                                                                              >  2:1487642/1‑150 (MQ=255)
                         aaaaaCTTCCGCGATTAATCGCGACTATGTGCGTTTTGTTCATGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATg                                                                                                                              >  1:4383717/1‑150 (MQ=255)
                          aaaaCTTCCGCGATTAATCGCGACTATGTGCGTTTTGTTCATGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGc                                                                                                                             >  1:5405918/1‑150 (MQ=255)
                           acatagtcgcgATTAATCGCGACTATGTGCGTTTTGTTCATGTCAGATGCGGCATGAACGCCGGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGAGAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGcc                                                                                                                            >  2:183885/8‑150 (MQ=255)
                             aCTTCCGCGATTAATCGCGACTATGTGCGTTTTGTTCATGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTg                                                                                                                          >  1:6174556/1‑150 (MQ=255)
                              cTTCCGCGATTAATCGCGACTATGTGCGTTTTGTTCATGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGa                                                                                                                         <  1:3242924/150‑1 (MQ=255)
                                  cgcgATTAATCGCGACTATGTGCGTTTTGTTCATGTCAGATGCGGCATGAACGACTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGaa                                                                                                                     >  2:1040072/1‑150 (MQ=255)
                                      aTTAATCGCGACTATGTGCGTTTTGTTCATGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGc                                                                                                                 <  2:1199631/150‑1 (MQ=255)
                                      aTTAATCGCGACTATGTGCGTTTTGTTCATGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGc                                                                                                                 <  1:297442/150‑1 (MQ=255)
                                       ttAATCGCGACTATGTGCGTTTTGTTCATGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGcc                                                                                                                <  1:40185/150‑1 (MQ=255)
                                       ttAATCGCGACTATGTGCGTTTTGTTCATGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGcc                                                                                                                >  1:6030645/1‑150 (MQ=255)
                                           tCGCGACTATGTGCGTTTTGTTCATGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGtt                                                                                                            >  1:4093374/1‑150 (MQ=255)
                                               gACTATGTGCGTTTTGTTCATGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTAt                                                                                                        <  1:3855543/150‑1 (MQ=255)
                                                     gtgCGTTTTGTTCATGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCaaa                                                                                                  <  1:935664/150‑1 (MQ=255)
                                                      tgCGTTTTGTTCATGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAg                                                                                                 >  2:7639307/1‑150 (MQ=255)
                                                      tgCGTTTTGTTCATGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAg                                                                                                 >  2:5569550/1‑150 (MQ=255)
                                                              gTTCATGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGt                                                                                         >  2:2023582/1‑150 (MQ=255)
                                                              gTTCATGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGt                                                                                         >  2:6149561/1‑150 (MQ=255)
                                                              gTTCATGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGt                                                                                         <  1:7954500/150‑1 (MQ=255)
                                                               ttCATGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTc                                                                                        >  2:2808923/1‑150 (MQ=255)
                                                               ttCATGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTc                                                                                        >  2:7993346/1‑150 (MQ=255)
                                                               ttCATGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTc                                                                                        >  1:2425184/1‑150 (MQ=255)
                                                                tCATGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCa                                                                                       >  1:5783039/1‑150 (MQ=255)
                                                                  aTGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACt                                                                                     <  2:3220249/150‑1 (MQ=255)
                                                                   tGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACtt                                                                                    >  2:5017830/1‑150 (MQ=255)
                                                                    gTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACttt                                                                                   <  1:1121263/150‑1 (MQ=255)
                                                                     tCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTg                                                                                  >  1:763127/1‑150 (MQ=255)
                                                                     tCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTg                                                                                  <  2:4936492/150‑1 (MQ=255)
                                                                     tCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTg                                                                                  >  1:8251507/1‑150 (MQ=255)
                                                                      cAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGc                                                                                 <  1:7739915/150‑1 (MQ=255)
                                                                            cGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGa                                                                           <  2:2499848/150‑1 (MQ=255)
                                                                            cGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCATGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGa                                                                           <  2:2696055/150‑1 (MQ=255)
                                                                               cATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGAttt                                                                        <  1:6122293/150‑1 (MQ=255)
                                                                                aTGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGAtttt                                                                       >  2:5474106/1‑150 (MQ=255)
                                                                                 tGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTc                                                                      <  1:3149070/150‑1 (MQ=255)
                                                                                   aaCGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTcac                                                                    <  1:2067966/150‑1 (MQ=255)
                                                                                   aaCGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTcac                                                                    <  2:3382275/150‑1 (MQ=255)
                                                                                   aaCGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTcac                                                                    <  1:8083666/150‑1 (MQ=255)
                                                                                    aCGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTcaca                                                                   <  1:4489155/150‑1 (MQ=255)
                                                                                        cTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTCACATAAg                                                               >  1:5687911/1‑150 (MQ=255)
                                                                                            ttCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTCACATAAGCTGa                                                           <  1:100835/150‑1 (MQ=255)
                                                                                               ggCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGcaggcctacaaagtttctgaattacaaaccattgtaggccgaatcaggcgttcatgccgcatctgacatgaacaaaacgcacatagtcgcgatta                                                        <  2:8229760‑M2/150‑96 (MQ=255)
                                                                                               ggCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTCACATAAGCTGAATg                                                        >  2:4371852/1‑150 (MQ=255)
                                                                                               ggCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTCACATAAGCTGAATg                                                        >  1:780460/1‑150 (MQ=255)
                                                                                               ggCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTCACATAAGCTGAATg                                                        >  1:5322647/1‑150 (MQ=255)
                                                                                               ggCCTACAAAGGTTTGGAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTCACATAAGCTGAATg                                                        >  2:214665/1‑150 (MQ=255)
                                                                                                 ccTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGAAAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACTAAATGCCTGTTCTATCTCAAAGCGATACCTCACTTTGCTGTCGAATTTCACAAAAGCTGAATGtt                                                      >  1:1577974/1‑150 (MQ=255)
                                                                                                  cTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTCACATAAGCTGAATGttc                                                     <  2:5175178/150‑1 (MQ=255)
                                                                                                  cTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTCACATAAGCTGAATGttc                                                     >  1:5522409/1‑150 (MQ=255)
                                                                                                     cAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTCACATAAGCTGAATGttcttc                                                  >  1:48073/1‑150 (MQ=255)
                                                                                                      aaaGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTCACATAAGCTGAATGttcttct                                                 >  2:418128/1‑150 (MQ=255)
                                                                                                      aaaGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTCACATAAGCTGAATGttcttct                                                 >  2:7059675/1‑150 (MQ=255)
                                                                                                      aaaGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTCACATAAGCTGAATGttcttct                                                 >  1:1284336/1‑150 (MQ=255)
                                                                                                      aaaGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTCACATAAGCTGAATGttcttct                                                 >  2:4050428/1‑150 (MQ=255)
                                                                                                      aaaGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGCCAATTCGCCGCGTTATTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTCACATAAGCTGAATGttcttct                                                 >  1:4958561/1‑150 (MQ=255)
                                                                                                       aaGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTCACATAAGCTGAATGttcttctt                                                <  1:5904448/150‑1 (MQ=255)
                                                                                                       aaGGATTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTCACATAAGCTGAATGttcttctt                                                <  1:6585141/150‑1 (MQ=255)
                                                                                                         ggTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTCACATAAGCTGAATGTtcttcttct                                              <  1:6831586/150‑1 (MQ=255)
                                                                                                          gTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTCACATAAGCTGAATGTTCTTCTTCTg                                             <  2:6022890/150‑1 (MQ=255)
                                                                                                              gTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTCACATAAGCTGAATGTTCTTCTTCTGCAAt                                         <  1:5145651/150‑1 (MQ=255)
                                                                                                                aaTTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGcaggcctacaaagtttctgaattacaaacctttgtaggccgaatcaggcgttcatgccgcatctgacatgaacaaaacgcacatagtcgcgattaatcgcggaagtttttga                                       <  2:3076252‑M2/150‑113 (MQ=255)
                                                                                                                aaTTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCGTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTCTCATAAGGTGAATGTTCTTCTTCTGCAATCa                                       >  2:7458041/1‑150 (MQ=255)
                                                                                                                   tCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTCACATAAGCTGAATGTTCTTCTTCTGCAATCAaca                                    >  2:899677/1‑150 (MQ=255)
                                                                                                                     aGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTCACATAAGCTGAATGTTCTTCTTCTGCAATCAACAct                                  >  1:2283019/1‑150 (MQ=255)
                                                                                                                     aGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTCACATAAGCTGAATGTTCTCCTTCTGCAATCAACAct                                  >  2:5649987/1‑150 (MQ=255)
                                                                                                                       aaaCTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTCACATAAGCTGAATGTTCTTCTTCTGCAATCAACActtc                                >  1:1783334/1‑150 (MQ=255)
                                                                                                                         aCTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTCACATAAGCTGAATGTTCTTCTTCTGCAATCAACActtctt                              <  1:3685497/150‑1 (MQ=255)
                                                                                                                            ttGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTCACATAAGCTGAATGTTCTTCTTCTGCAATCAACACTTCTTTGa                           <  2:8096875/150‑1 (MQ=255)
                                                                                                                             tGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTCACATAAGCTGAATGTTCTTCTTCTGCAATCAACACTTCTTTGAt                          <  1:3404400/150‑1 (MQ=255)
                                                                                                                                 ggCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTCACATAAGCTGAATGTTCTTCTTCTGCAATCAACACTTCTTTGATGCCt                      >  1:6392344/1‑150 (MQ=255)
                                                                                                                                  gCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTCACATAAGCTGAATGTTCTTCTTCTGCAATCAACACTTCTTTGATGCCtt                     >  1:1455414/1‑150 (MQ=255)
                                                                                                                                  gCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTCACATAAGCTGAATGTTCTTCTTCTGCAATCAACACTTCTTTGATGCCtt                     <  1:6707154/150‑1 (MQ=255)
                                                                                                                                  gCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTCACATAAGCTGAATGTTCTTCTTCTGCAATCAACACTTCTTTGATGCCtt                     >  1:4320609/1‑150 (MQ=255)
                                                                                                                                      gATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTCACATAAGCTGAATGTTCTTCTTCTGCAATCAACACTTCTTTGATGCCTTCAGt                 <  1:7557799/150‑1 (MQ=255)
                                                                                                                                        tAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTCACATAAGCTGAATGTTCTTCTTCTGCAATCAACACTTCTTTGATGCCTTCAGttt               <  2:7747865/150‑1 (MQ=255)
                                                                                                                                           gCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTCACATAAGATGAATGTTCTTCTTCTGCAATCAACACTTCTTTGATGCCTTCAGTTTCTa            <  1:201444/150‑1 (MQ=255)
                                                                                                                                              tAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTCACATAAGCTGAATGTTCTTCTTCTGCAATCAACACTTCTTTGATGCCTTCAGTTTCTAGCa         <  1:2710935/150‑1 (MQ=255)
                                                                                                                                                gcgcAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTCACATAAGCTGAATGTTCTTCTTCTGCAATCAACACTTCTTTTATGACTTCAGTTTCTAGCaaa       >  1:6240219/1‑150 (MQ=255)
                                                                                                                                                gcgcAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTCACATAAGCTGAATGTTCTTCTTCTGCAATCAACACTTCTTTGATGCCTTCAGTTTCTAGCaaa       <  2:1665254/150‑1 (MQ=255)
                                                                                                                                                    agcagGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTCACATAAGCTGAATGTTCTTCTTCTGCAATCAACACTTCTTTGATGCCTTCAGTTTCTAGCAAACGCa   >  2:6484377/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
CGATCTCGGTCAGCCGTTCCAGTTCAAAAACTTCCGCGATTAATCGCGACTATGTGCGTTTTGTTCATGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTCACATAAGCTGAATGTTCTTCTTCTGCAATCAACACTTCTTTGATGCCTTCAGTTTCTAGCAAACGCAC  >  NC_000913/445132‑445430

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.