| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4531428 | 250 (1.000) | 4 (0.020) | 4/260 | NT | 1.6% | coding (224/1122 nt) | sgcX | putative endoglucanase with Zn‑dependent exopeptidase domain |
| ? | NC_000913 | = 4531451 | 255 (1.100) | coding (201/1122 nt) | sgcX | putative endoglucanase with Zn‑dependent exopeptidase domain | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TCGTCGCCTTTGGCAAAGTGGTAGGACTTAATGCCGATACACCCCATGACTGGCCCTTTGTCCCCGGTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4531272‑4531428‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttttgcgcaTATGGATGAAGTCGGTTTTATGGTGCGCAAAATAGAGCCGTCTGGATTTTTACGCTTTGAACGCGTAGGCGGTCCTGCGCAGGTCACTATGGCTGGTTCCATCGTCACCCTCACCGGGGACAAAGGGCCAGTCATGGGGTGTATCGGC < NC_000913/4531451‑4531304 TCGTCGCCTTTGGCAAAGTGGTAGGACTTAATGCCGATACACCCCATGACTGGCCCTTTGTCCCCGGTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATT > 2:2630470/1‑150TCGTCGCCTTTGGCAAAGTGGTAGGACTTAATGCCGATACACCCCATGACTGGCCCTTTGTCCCCGGTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATT > 1:1719740/1‑150TCGTCGCCTTTGGCAAAGTGGTAGGACTTAATGCCGATACACCCCATGACTGGCCCTTTGTCCCCGGTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATT > 2:4035136/1‑150TCGTCGCCTTTGGCAAAGTGGTAGGACTTAATGCCGATACACCCCATGACTGGCCCTTTGTCCCCGGTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATT > 2:3199830/1‑150TCGTCGCCTTTGGCAAAGTGGTAGGACTTAATGCCGATACACCCCATGACTGGCCCTTTGTCCCCGGTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATT < 2:3059025/150‑1TCGTCGCCTTTGGCAAAGTGGTAGGACTTAATGCCGATACACCCCATGACTGGCCCTTTGTCCCCGGTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATT < 2:3058844/150‑1TCGTCGCCTTTGGCAAAGTGGTAGGACTTAATGCCGATACACCCCATGACTGGCCCTTTGTCCCCGGTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATT > 1:603101/1‑150TCGTCGCCTTTGGCAAAGTGGTAGGACTTAATGCCGATACACCCCATGACTGGCCCTTTGTCCCCGGTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATT > 2:2630501/1‑150 GTCGCCTTTGGCAAAGTGGTAGGACTTAATGCCGATACACCCCATGACTGGCCCTTTGTCCCCGGTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTT > 1:1980684/1‑150 GTCGCCTTTGGCAAAGTGGTAGGACTTAATGCCGATACACCCCATGACTGGCCCTTTGTCCCCGGTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTT < 1:2043913/150‑1 GTCGCCTTTGGCAAAGTGGTAGGACTTAATGCCGATACACCCCATGACTGGCCCTTTGTCCCCGGTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTT > 1:2305217/1‑150 GTCGCCTTTGGCAAAGTGGTAGGACTTAATGCCGATACACCCCATGACTGGCCCTTTGTCCCCGGTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTT > 2:2639623/1‑150 GTCGCCTTTGGAAATGTGGTAGGACTTAATGCCGATACACCCCATGACTGGCCCTTTGTCCCCGGTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTT < 1:588430/150‑1 GTCGCATTGGGAAATGTGTTAGGACTTAATGCCGATACACCCCATGACTGGCCCTTTGTCCCGGGTGTGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCTTAAAAATCCAGACGGCTCTATTTT < 1:876642/150‑1 TCGCCTTTGGCAATGTGTTAGTAATTAATGCCGATACACCCCATGACTGGCCCTTTGTCCCCGGTGTGGGTGACGTTGTAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTAAAAGCGTAAAAATCCAGACGGCTCTATTTTG < 1:1181237/150‑1 TCGCCTTTGGCAAAGTGTTAGGACTTAATGCCGATACACCCCATGACTGGCCCTTTGTCCCCGGTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTG < 2:1192152/150‑1 TCGCCTTTGGCAAAGTGGTAGGACTTAATGCCGATACACCCCATGACTGGCCCTTTGTCCCCGGTGAGGGTGACGATGGAACCAGCCATTGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTG < 2:1067929/150‑1 TCGCCTTTGGCAAAGTGGTAGGACTTAATGCCGATACACCCCATGACTGGCCCTTTGTCCCCGGTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTG < 2:84527/150‑1 TCGCCTTTGGCAAAGTGGTAGGACTTAATGCCGATACACCCCATGACTGGCCCTTTGTCCCCGGTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTG < 2:1192138/150‑1 TCGCCTTTGGCAAAGTGGTAGGACTTAATGCCGATACACCCCATGACTGGCCCTTTGTCCCCGGTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTG < 2:1192285/150‑1 TCGCCTTTGGCAAAGTGGTAGGACTTAATGCCGATACACCCCATGACTGGCCCTTTGTCCCCGGTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTG < 2:1192126/150‑1 CCTTTGGCAAAGTGGTAGGACTTAATGCCGATACACCCCATGACTGGCCCTTTGTCCCCGGTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGC < 2:941855/150‑1 CTTTGGCAAAGTGGTAGGACTTAATGCCGATACACCCCATGACTGGCCCTTTGTCCCCGGTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCA > 1:1032976/1‑150 CTTTGGCAAAGTGGTAGGACTTAATGCCGATACACCCCATGACTGGCCCTTTGTCCCCGGTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCA > 2:2209354/1‑150 CTTTGGCAAAGTGGTAGGACTTAATGCCGATACACCCCATGACTGGCCCTTTGTCCCCGGTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCA > 1:290294/1‑150 CAAAGTGGTAGGACTTAATGCCGATACACCCCATGACTGGCCCTTTGTCCCCGGTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCATATGGA < 1:1755527/150‑1 TGCCGATACACCCCATGACTGGCCCTTTGTCCCCGGTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCATACGCGTTCAAAGCGTAAAAATCCACACGGCTCTATTTTGCGCATATGGATGAAGTCGGTTTTATGGT < 1:827746/150‑1 CCATGACTGGCCCTTTGTCCCCGGTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCATATGGATGAAGTCGGTTTTATGGTGCGCAAAATAGA < 2:2596043/150‑1 CATGACTGGCCCTTTGTCCCCGGTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCATATGGATGAAGTCGGTTTTATGGTGCGCAAAATAGAG < 2:1546113/150‑1 TTTGCGCATAGGGATGAAGTCGGTTTTATGGTGCGCAAAATAGAGCCGTCTGGATTTTTACGCTTTGAACGCGTAGGCGGTCCTGCGCAGGTCACTATGGCTGGTTCCATCGTCACCCTCACCGGGGACAAAGGGCCAGTCATGGGGTGT < 1:1614274/150‑1 GCGCATATGGATGAAGTCGGTTTTATGGTGCGCAAAATAGAGCCGTCTGGATTTTTACGCTTTGAACGCGTAGGCGGTCCTGCGCAGGTCACTATGGCTGGTTCCATCGTCACCCTCACCGGGGACAAAGGGCCAGTCATGGGGTGTATC < 1:3514022/150‑1 CGCATATGGATGAAGTCGGTTTTATGGTGCGCAAAATAGAGCCGTCTGGATTTTTACGCTTTGAACGCGTAGGCGGTCCTGCGCAGGTCACTATGGCTGGTTCCATCGTCACCCTCACCGGGGACAAAGGGCCAGTCATGGGGTGTATCG > 2:3773908/1‑150 CGCATATGGATGAAGTCGGTTTTATGGTGCGCAAAATAGAGCCGTCTGGATTTTTACGCTTTGAACGCGTAGGCGGTCCTGCGCAGGTCACTATGGCTGGTTCCATCGTCACCCTCACCGGGGACAAAGGGCCAGTCATGGGGTGTATCG > 2:431449/1‑150 GCATATGGATGAAGTCGGTTTTATGGTGCGCAAAATAGAGCCGTCTGGATTTTTACGCTTTTAACGCGTAGGCGGTCCTGCGCAGGTCACTATGGCTGGTTCCATCGTCACCCTCACCGGGGACAAAGGGCCAGTCATGGGGTGTATCGG > 1:811038/1‑150 GCAGATGGATGAAGTCGGTTTTATGGTGCGCAAAATAGAGCCGTCTGGATTTTTACGCTTTGAACGCGTAGGCGGTCCTGCGCAGGTCACTATGGCTGGTTCCATCGTCACCCTCACCGGGGACAAAGGGCCAGTCATGGGGTGTATCGG < 1:1955612/150‑1 CATATGGATGAAGTCGGTTTTATGGTGCGCAAAATAGAGCCGTCTGGATTTTTACGCTTTGAACGCGTAGGCGGTCCTGCGCAGGTCACTATGACTGGTTCCATCGTCACCCTCACCGGGGACAAAGGGCCAGTCATGGGGTGTATCGGC > 2:2037448/1‑150 TCGTCGCCTTTGGCAAAGTGGTAGGACTTAATGCCGATACACCCCATGACTGGCCCTTTGTCCCCGGTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4531272‑4531428‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttttgcgcaTATGGATGAAGTCGGTTTTATGGTGCGCAAAATAGAGCCGTCTGGATTTTTACGCTTTGAACGCGTAGGCGGTCCTGCGCAGGTCACTATGGCTGGTTCCATCGTCACCCTCACCGGGGACAAAGGGCCAGTCATGGGGTGTATCGGC < NC_000913/4531451‑4531304 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |