New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4497499309 (1.240)5 (0.020) 3/266 NT 1.7% pseudogene (825/1266 nt) intB pseudogene, integrase homology;IS, phage, Tn; Phage‑related functions and prophages; KpLE2 phage‑like element; P4‑like integrase
?NC_000913 = 4497525 290 (1.220)pseudogene (851/1266 nt) intB pseudogene, integrase homology;IS, phage, Tn; Phage‑related functions and prophages; KpLE2 phage‑like element; P4‑like integrase
Rejected: Frequency below/above cutoff threshold.

Only 100 of 369 total aligned reads displayed.

CGATGGGCGATAGAACTCACTTTGCTGATCTTTATTCGGTCCAGTGAGCTGCGTTTTGCTCGTTGGTCAGAGATCGATTTCGAAGCGTCTATATGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTAAAGCAGATAAAACAGTTTTATGGGGCCCATGACTTGATATTTATTGGTGATCACGATTCGCACAAACCCATGAGTGAGAATACGGTAAATAG  >  NC_000913/4497350‑4497648
                                                                                                                                                     |                                                                                                                                                     
       cGATAGAACTCACTTTGCTGATCTTTATTCGGTCCAGTGAGCTGCGTTTTGCTCGTTGGTCAGAGATCGATTTCGAAGCGTCTATATGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCaaaaa                                                                                                                                                <  1:3437959/150‑1 (MQ=255)
        gATAGAACTCACTTTGCTGATCTTTATTCGGTCCAGTGAGCTGCGTTTTGCTCGTTGGTCAGAGATCGATTTCGAAGCGTCTATATGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAAt                                                                                                                                               >  1:374254/1‑150 (MQ=255)
        gATAGAACTCACTTTGCTGATCTTTATTCGGTCCAGTGAGCTGCGTTTTGCTCGTTGGTCAGAGATCGATTTCGAAGCGTCTATATGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAAt                                                                                                                                               <  2:256323/150‑1 (MQ=255)
         aTAGAACTCACTTTGCTGATCTTTATTCGGTCCAGTGAGCTGCGTTTTGCTCGTTGGTCAGAGATCGATTTCGAAGCGTCTATATGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATg                                                                                                                                              >  1:3482627/1‑150 (MQ=255)
          tAGAACTCTCTTTGCTGATCTTTAGTCGGTCCAGTGAGTTGCGTTTTGCTCGTTGGTCAGAGATCGTTTTCGAAGCGTCTATATGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGc                                                                                                                                             <  2:3850865/150‑1 (MQ=255)
          tAGAACTCACTTTGCTGATCTTTATTCGGTCCAGTGAGCTGCGTTTTGCTCGTTGGTCAGAGATCGATTTCGAAGCGTCTATATGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGc                                                                                                                                             <  2:3470671/150‑1 (MQ=255)
          tAGAACTCACTATGCTGAACATTATTCGGTCCAGAGAGCTGCGTTTTGCTCGTTGGTCAGAGAACGATTTCGAAGCGTCAATATGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCACAAAAATGc                                                                                                                                             <  2:2425559/150‑1 (MQ=255)
               cTCACTTTGCTGATCTTTATTCGGTCCAGTGAGCTGCGTTTTGCTCGTTGGTCAGAGATCGATTTCGAAGCGTCTATATGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACa                                                                                                                                        >  1:2540703/1‑150 (MQ=255)
                tCACTTTGCTGATCTTTATTCGGTCCAGTGAGCTGCGTTTTGCTCGTTGGTCAGAGATCGATTTCGAAGCGTCTATATGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACaa                                                                                                                                       >  1:2409246/1‑150 (MQ=255)
                tCACTTTGCTGATCTTTATTCGGTCCAGTGAGCTGCGTTTTGCTCGTTGGTCAGAGATCGATTTCGAAGCGTCTATATGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACaa                                                                                                                                       >  1:3639901/1‑150 (MQ=255)
                tCACTTTGCTGATCTTTATTCGGTCCAGTGAGCTGCGTTTTGCTCGTTGGTCAGAGATCGATTTCGAAGCGTCTATATGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACaa                                                                                                                                       >  2:3257070/1‑150 (MQ=255)
                tCACTTTGCTGATCTTTATTCGGTCCAGTGAGCTGCGTTTTGCTCGTTGGTCAGAGATCGATTTCGAAGCGTCTATATGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACaa                                                                                                                                       <  1:1074659/150‑1 (MQ=255)
                    tttGCTGATCTTTAATCGGTCCAGTGAGCTGCGGTTTGCACGTTGGTCAGATATCGATAACGAACCGACTATATGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCa                                                                                                                                   >  2:1270331/1‑150 (MQ=255)
                           aTCTTTATTCGGTCCAGTGAGCTGCGTTTTGCTCGTTGGTCAGAGATCGATTTCGAAGCGTCTATATGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTg                                                                                                                            >  1:2464750‑M2/1‑149 (MQ=255)
                           aTCTTTATTCGGTCCAGTGAGCTGCGTTTTGCTCGTTGGTCAGAGATCGATTTCGAAGCGTCTATATGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTg                                                                                                                            <  1:3769201‑M2/150‑2 (MQ=255)
                           aTCTTTATTCGGTCCAGTGAGCTGCGTTTTGCTCGTTGGTCAGAGATCGATTTCGAAGCGTCTATATGGACTATCCCACCGGAGCGGAAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTg                                                                                                                            >  2:2516935‑M2/1‑149 (MQ=255)
                              tttATTCGGTCCAGTGAGCTGCGTTTTGCTCGTTGGTCAGAGATCGATTTCGAAGCGTCTATATGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTgcct                                                                                                                         <  1:4163035‑M2/150‑5 (MQ=255)
                               ttATTCGGTCCAGTGAGCTGCGTTTTGCTCGTTGGTCAGAGATCGATTTCGAAGCGTCTATATGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTgcctc                                                                                                                        >  1:3235094‑M2/1‑145 (MQ=255)
                                  ttCGGTCCAGTGAGCTGCGTTTTGCTCGTTGGTCAGAGATCGATTTCGAAGCGTCTATATGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCttt                                                                                                                     <  1:1576177/150‑1 (MQ=255)
                                  ttCGGTCCAGTGAGCTGCGTTTTGCTCGTTGGTCAGAGATCGATTTCGAAGCGTCTATATGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCttt                                                                                                                     >  1:3020176/1‑150 (MQ=255)
                                   tCGGTCCAGTGAGCTGCGTTTTGCTCGTTGGTCAGAGATCGATTTCGAAGCGTCTATATGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTc                                                                                                                    <  1:1329111/150‑1 (MQ=255)
                                    cGGTCCAGTGAGCTGCGTTTTGCTCGTTGGTCAGAGATCGATTTCGAAGCGTCTATATGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATATAGGCactagattcgttgtacgcatttttgagcctctatgg                                                                                                                   <  1:2967873‑M1/150‑37 (MQ=255)
                                     ggTCCAGTGAGCTGCGTTTTGCTCGTTGGTCAGAGATCGATTTCGAAGCGTCTATATGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCaa                                                                                                                  <  1:3081896/150‑1 (MQ=255)
                                     ggTCCAGTGAGCTGCGTTTTGCTCGTTGGTCAGAGATCGATTTCGAAGCGTCTATATGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCaa                                                                                                                  <  1:549774/150‑1 (MQ=255)
                                     ggTCCAGTGAGCTGCGTTTTGCTCGTTGGTCAGAGATCGATTTCGAAGCGTCTATATGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCaa                                                                                                                  >  2:236568/1‑150 (MQ=255)
                                     ggTCCAGTGAGCTGCGTTTTGCTCGTTGGTCAGAGATCGATTTCGAAGCGTCTATATGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCaa                                                                                                                  <  2:2892588/150‑1 (MQ=255)
                                      gTCCAGTGAGCTGCGTTTTGCTCGTTGGTCAGAGATCGATTTCGAAGCGTCTATATGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAAc                                                                                                                 <  2:797158/150‑1 (MQ=255)
                                          aGTGAGCTGCGTTTTGCTCGTTGGTCAGAGATCGATTTCGAAGCGTCTATATGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCaa                                                                                                             <  1:682750/150‑1 (MQ=255)
                                            tGAGCTGCGTTTTGCTCGTTGGTCAGAGATCGATTTCGAAGCGTCTATATGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGc                                                                                                           <  1:1489485/150‑1 (MQ=255)
                                            tGAGCTGCGTTTTGCTCGTTGGTCAGAGATCGATTTCGAAGCGTCTATATGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGc                                                                                                           >  2:2516593/1‑150 (MQ=255)
                                                cTGCGTTTTGCTCGTTGGTCAGAGATCGATTTCGAAGCGTCTATATGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCtt                                                                                                       >  2:3979803/1‑150 (MQ=255)
                                                cTGCGTTTTGCTCGTTGGTCAGAGATCGATTTCGAAGCGTCTATATGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCtt                                                                                                       >  2:1190085/1‑150 (MQ=255)
                                                cTGCGTTTTGCTCGTTGGTCAGAGATCGATTTAGAAGCGTCTATATGGACTATACAACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATACCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCtt                                                                                                       >  2:3768292/1‑150 (MQ=255)
                                                  gCGTTTTGCTCGTTGGTCAGAGATCGATTTCGAAGCGTCTATATGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGc                                                                                                     >  2:1404031/1‑150 (MQ=255)
                                                     ttttGCTCGTTGGTCAGAGATCGATTTCGAAGCGTCTATATGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAAt                                                                                                  >  1:4013097/1‑150 (MQ=255)
                                                     ttttGCTCGTTGGTCAGAGATCGATTTCGAAGCGTCTATATGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAAt                                                                                                  >  1:1929382/1‑150 (MQ=255)
                                                     ttttGCTCGTTGGTCAGAGATCGATTTCGAAGCGTCTATATGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAAt                                                                                                  >  2:1074073/1‑150 (MQ=255)
                                                           tCGTTGGTCAGAGATCGATTTCGAAGCGTCTATATGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTaaa                                                                                            <  2:696315/150‑1 (MQ=255)
                                                           tCGTTGGTCAGAGATCGATTTCGAAGCGTCTATATGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTaaa                                                                                            <  1:997251/150‑1 (MQ=255)
                                                           tCGTTGGTCAGAGATCGATTTCGAAGCGTCTATATGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTaaa                                                                                            <  2:1598025/150‑1 (MQ=255)
                                                                  tCAGAGATCGATTTCGAAGCGTCTATATGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTAAAGCAGATa                                                                                     >  1:513906/1‑150 (MQ=255)
                                                                    agagATCGATTTCGAAGCGTCTATATGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTAAAGCAGATaaa                                                                                   >  1:1812418/1‑150 (MQ=255)
                                                                    agagATCGATTTCGAAGAGTCTATATGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCACGCTCTTGCAATTTTAAAGCAGATaaa                                                                                   >  2:2042211/1‑150 (MQ=255)
                                                                      agaTCGATTTCGAAGCGTCTATATGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTAAAGCAGATAAAAc                                                                                 >  2:2298355/1‑150 (MQ=255)
                                                                           gATTTCGAAGCGTCTATATGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTAAAGCAGATAAAACAGttt                                                                            >  2:3577288/1‑150 (MQ=255)
                                                                               tCGAAGCGTCTATATGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTAAAGCAGATAAAACAGTTTTATg                                                                        <  1:3814942/150‑1 (MQ=255)
                                                                                  aaGCGTCTATATGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTAAAGCAGATAAAACAGTTTTATgggg                                                                     <  1:2814108/150‑1 (MQ=255)
                                                                                   aGCGTCTATCTGGACTCTCCCACCGGAGCGGGAGCCTATTACTTGAGTGACACATTCCAATAGAGGCTCAAAAATGCGTACAAAGCATCTAGTGCGTCTGTGAACGCAAGCTCTTTCATTTTTAAAGCATTTAAATCAGTTTTATGGGGc                                                                    <  1:2761875/150‑1 (MQ=255)
                                                                                     cGTCTATATGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTAAAGCAGATAAAACAGTTTTATGGGGccc                                                                  >  1:139192/1‑150 (MQ=255)
                                                                                      gTCTATATGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTAAAGCAGATAAAACAGTTTTATGGGGCCCa                                                                 >  1:2984276/1‑150 (MQ=255)
                                                                                      gTCTATATGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTAAAGCAGATAAAACAGTTTTATGGGGCCCa                                                                 >  1:3361290/1‑150 (MQ=255)
                                                                                         tataTGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAGCATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTAAAGCAGATAAAACAGTTTTATGGGGCCCATGa                                                              >  1:3170510/1‑150 (MQ=255)
                                                                                            atGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGTAATTTTAAAGCAGATAAAACAGTTTTATGGGGCCCATGACtt                                                           <  2:294023/150‑1 (MQ=255)
                                                                                             tGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTAAAGCAGATAAAACTGTTTTATGGGGCCCATGACTTg                                                          >  2:1710809/1‑150 (MQ=255)
                                                                                             tGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTAAAGCAGATAAAACAGTTTTATGGGGCCCATGACtgg                                                          >  2:1821728/1‑148 (MQ=255)
                                                                                             tGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTAAAGCAGATAAAACAGTTTTATGGGGCCCATGACTTg                                                          >  2:520871/1‑150 (MQ=255)
                                                                                             tGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTAAAGCAGATAAAACAGTTTTATGGGGCCCATGACTTg                                                          >  1:3339821/1‑150 (MQ=255)
                                                                                             tGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTAAAGCAGATAAAACAGTTTTATGGGGCCCATGACTTg                                                          >  1:2318009/1‑150 (MQ=255)
                                                                                             tGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAAGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTAAAGCAGATAAAACAGTTTTATGGGGCCCATGACTTg                                                          >  1:1240402/1‑150 (MQ=255)
                                                                                                aCTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTAAAGCAGATAAAACAGTTTTATGGGGCCCATGACTTGata                                                       <  2:1302247/150‑1 (MQ=255)
                                                                                                aCTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTAAAGCAGATAAAACAGTTTTATGGGGCCCATGACTTGata                                                       <  2:3345746/150‑1 (MQ=255)
                                                                                                 cTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTAAAGCAGATAAAACAGTTTTATGGGGCCCATGACTTGatat                                                      >  1:1857400/1‑150 (MQ=255)
                                                                                                  tATCCCACCGGCGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTCAAGCAGATAAAACCGTGTTATGGGGCCCAGGACTGGAtctt                                                     >  2:4053903/1‑150 (MQ=255)
                                                                                                    tCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTAAAGCAGATAAAACAGTTTTATGGGGCCCATGACTTGAtattta                                                   <  1:354321/150‑1 (MQ=255)
                                                                                                      ccACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTAAAGCAGATAAAACAGTTTTATGGGGACCATGACTTGAtagttatt                                                 >  2:3378852/1‑150 (MQ=255)
                                                                                                       cACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTAAAGCAGATAAAACAGTTTTATGGGGCCCATGACTTGATATTTATTg                                                >  2:3014121/1‑150 (MQ=255)
                                                                                                       cACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTAAAGCAGATAAAACAGTTTTATGGGGCCCATGACTTGATATTTATTg                                                <  1:950309/150‑1 (MQ=255)
                                                                                                       cACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTAAAGCAGATAAAACAGTTTTATGGGGCCCATGACTTGATATTTATTg                                                >  1:742604/1‑150 (MQ=255)
                                                                                                        aacGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTAAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAAAGAAAGCTATTGCAATTTTAAAGCATATAAAACAGTTTTATGTGGCCCATGACTTGATATTTATTgg                                               >  1:2152827/3‑150 (MQ=255)
                                                                                                        aCCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTAAAGCAGATAAAACAGTTTTATGGGGCCCATGACTTGATATTTATTgg                                               >  2:2651431/1‑150 (MQ=255)
                                                                                                         ccGGAGCGTGAGCCTATTCCTGGAGTGAAACAGTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTAAAGCAGATAAAACAGTTTTATGGGGCCCATGACTTGATATTTATTGGt                                              <  1:874897/150‑1 (MQ=255)
                                                                                                         ccGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTAAAGCAGATAAAACAGTTTTATGGGGCCCATGACTTGATATTTATTGGt                                              <  2:2863181/150‑1 (MQ=255)
                                                                                                            gAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTAAAGCAGATAAAACAGTTTTATGGGGCCCATGACTTGATATTTATTGGTGAt                                           <  2:1479703/150‑1 (MQ=255)
                                                                                                            gAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTAAAGCAGATAAAACAGTTTTATGGGGCCCATGACTTGATATTTATTGGTGAt                                           >  1:4086916/1‑150 (MQ=255)
                                                                                                                  gAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTAAAGCAGATAAAACAGTTTTATGGGGCCCATGACTTGATATTTATTGGTGATCACGAt                                     >  1:492052/1‑150 (MQ=255)
                                                                                                                  gAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTAAAGCAGATAAAACAGTTTTATGGGGCCCATGACTTGATATTTATTGGTGATCACGAt                                     >  1:1552228/1‑150 (MQ=255)
                                                                                                                      cTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTAAAGCAGATAAAACAGTTTTATGGGGCCCATGACTTGATATTTATTGGTGATCACGATTCGc                                 >  2:4139873/1‑150 (MQ=255)
                                                                                                                        aTTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTAAAGCAGATAAAACAGTTTTATGGGGCCCATGACTTGATATTTATTGGTGATCACGATTCGcac                               <  1:2632165/150‑1 (MQ=255)
                                                                                                                             tGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTAAAGCAGATAAAACAGTTTTATGGGGCCCATGACTTGATATTTATTGGTGATCACGATTCGCACAAAcc                          >  1:225844/1‑150 (MQ=255)
                                                                                                                             tGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTAAAGCAGATAAAACAGTTTTATGGGGCCCATGACTTGATATTTATTGGTGATCACGATTCGCACAAAcc                          >  1:2014202/1‑150 (MQ=255)
                                                                                                                                  tGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTAAAGCAGATAAAACAGTTTTATGGGGCCCATGACTTGATATTTATTGGTGATCACGATTCGCACAAACCCAtga                     >  2:2746726/1‑150 (MQ=255)
                                                                                                                                  tGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTAAAGCAGATAAAACAGTTTTATGGGGCCCATGACTTGATATTTATTGGTGATCACGATTCGCACAAACCCAtga                     >  2:2098629/1‑150 (MQ=255)
                                                                                                                                  tGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTAAAGCAGATAAAACAGTTTTATGGGGCCCATGACTTGATATTTATTGGTGATCACGATTCGCACAAACCCAtga                     >  2:1797012/1‑150 (MQ=255)
                                                                                                                                   gAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTTCAATTTTATAGCAGATATAACAGTTTTATGGGGCCCATTACTTGATATTTATTGGTGATCACGATTCGCACAAACCCAtgag                    <  2:3954271/150‑1 (MQ=255)
                                                                                                                                   gAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTAAAGCAGATAAAACAGTTTTATGGGGCCCATGACTTGATATTTATTGGTGATCACGATTCGCACAAACCCAtgag                    >  2:1546862/1‑150 (MQ=255)
                                                                                                                                   gAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTAAAGCAGATAAAACAGTTTTATGGGGCCCATGACTTGATATTTATTGGTGATCACGATTCGCACAAACCCAtgag                    <  1:4145718/150‑1 (MQ=255)
                                                                                                                                     aaCATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTAAAGCAGATAAAACAGTTTTATGGGGCCCATGACTTGATATTTATTGGTGATCACGATTCGCACAAACCCAtgagtg                  >  2:453079/1‑150 (MQ=255)
                                                                                                                                      aCATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTAAAGCAGATAATACAGTTTTATGGGGCCCATGACTTGATATTTATTGGTGATCACGATTCGCACAAACCCAtgagtga                 <  1:2893120/150‑1 (MQ=255)
                                                                                                                                      aCATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTAAAGCAGATAAAACAGTTTTATGGGGCCCATGACTTGATATTTATTGGTGATCACGATTCGCACAAACCCAtgagtga                 <  1:1874047/150‑1 (MQ=255)
                                                                                                                                         ttCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTAAAGCAGATAAAACAGTTTTATGGGGCCCATGACTTGATATTTATTGGTGATCACGATTCGCACAAACCCATGAGTGAGaa              >  1:1120733/1‑150 (MQ=255)
                                                                                                                                          tCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTAAAGCAGATAAAACAGTTTTATGGGGCCCATGACTTGATATTTATTGGTGATCACGATTCGCACAAACCCATGAGTGAGAAt             >  2:252646/1‑150 (MQ=255)
                                                                                                                                              aTAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTAATGCAGTTAAAACTGTTTTATGGGGCCGATGAGTTGTTTTTTATTGGTGATGACGATTCGCACAATCCGATGTGTGTGAATAggg         >  2:268369/1‑150 (MQ=255)
                                                                                                                                                 gagGCactagatgcgttgtacgcatttttgagcctctatgggaatgtttcactccaggaataggctcccgctccggtgggatagtccatatagacgcttcgaaatcgatctctgaccaacgagcaaaacgcagctcactggaccgaataa      >  1:1924675‑M1/1‑5 (MQ=255)
                                                                                                                                                  agGCactagatgcgttgtacgcatttttgagcctctatgggaatgtttcactccaggaataggctcccgctccggtgggatagtccatatagacgcttcgaaatcgatctctgaccaacgagcaaaacgcagctcactggaccgaataaa     <  2:3163261‑M1/150‑147 (MQ=255)
                                                                                                                                                  agGCactagatgcgttgtacgcatttttgagcctctatgggaatgtttcactccaggaataggctcccgctccggtgggatagtccatatagacgcttcgaaatcgatctctgaccaacgagcaaaacgcagctcactggaccgaataaa     <  1:2062979‑M1/150‑147 (MQ=255)
                                                                                                                                                   ggCactagatgcgttgtacgcatttttgagcctctatgggaatgtttcactccaggaataggctcccgctccggtgggatagtccatatagacgcttcgaaatcgatctctgaccaacgagcaaaacgcagctcactggaccgaataaag    <  1:130032‑M1/150‑148 (MQ=255)
                                                                                                                                                    gCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTAAAGCAGATAAAACAGTTTTATGGGGCCCATGACTTGATATTTATTGGTGATCACGATTCGCACAAACCCATGAGTGAGAATACGGTAAATa   >  1:1660473/1‑150 (MQ=255)
                                                                                                                                                    gCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTAAAGCAGATAAAACAGTTTTATGGGGCCCATGACTTGATATTTATTGGTGATCACGATTCGCACAAACCCATGAGTGAGAATACGGTAAATa   >  1:1716/1‑150 (MQ=255)
                                                                                                                                                    gCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTAAAGCAGATAAAACAGTTTTATGGGGCCCATGACTTGATATTTATTGGTGATCACGATTCGCACAAACCCATGAGTGAGAATACGGTAAATa   >  1:2430989/1‑150 (MQ=255)
                                                                                                                                                     cactagatgcgttgtacgcatttttgagcctctatgggaatgtttcactccaggaataggctcccgctccggtgggatagtccatatagacgcttcgaaatcgatctctgaccaacgagcaaaacgcagctcactggaccgaataaagat  <  2:2096081‑M1/150‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
CGATGGGCGATAGAACTCACTTTGCTGATCTTTATTCGGTCCAGTGAGCTGCGTTTTGCTCGTTGGTCAGAGATCGATTTCGAAGCGTCTATATGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTAAAGCAGATAAAACAGTTTTATGGGGCCCATGACTTGATATTTATTGGTGATCACGATTCGCACAAACCCATGAGTGAGAATACGGTAAATAG  >  NC_000913/4497350‑4497648

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.