| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 781,668 | C→T | 5.1% | intergenic (+16/‑417) | lysQ → / → nadA | tRNA‑Lys/quinolinate synthase, subunit A |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 781,668 | 0 | C | T | 5.1% | 737.1 / 19.2 | 234 | intergenic (+16/‑417) | lysQ/nadA | tRNA‑Lys/quinolinate synthase, subunit A |
| Reads supporting (aligned to +/- strand): ref base C (120/101); new base T (10/2); total (130/104) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.11e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 244 total aligned reads displayed.
AGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAA > NC_000913/781522‑781817 | acctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccacttcGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTaa < 2:1566107‑M1/95‑1 (MQ=255) cctcccttacatggagggggtcggcggttcgatcccgtcatcacccaccacttgGGGTCTTTAGCTCAGTTGGTAGAGCTGTTGACTTTTAATCATTTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTaaa > 1:1402431‑M1/55‑150 (MQ=255) tCATCCTGCACGACCCACCATCCTTAATTATTAAGGCAGCATAATCCCGCTAGGGGTCGTTAGCTCAGTTGGTAGAGCTGTTTACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAAAAGCGCCCTAAAG < 1:869226‑M1/150‑1 (MQ=255) tCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAG < 2:3468492‑M1/150‑1 (MQ=255) ctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccacttcGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCTGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAg > 1:2255645‑M1/54‑150 (MQ=255) tCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAATCGCCCTAAAGGCG > 1:133093‑M1/1‑150 (MQ=255) ccttacaaggaggggggcggcggttcgatcccgtcatcacccaccacttcGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGgcg < 2:3387684‑M1/100‑1 (MQ=255) cttacaaggagggggtcggcggttcgatcccgtcatcacccaccacttcGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGgcgc > 2:116049‑M1/50‑150 (MQ=255) cttacaaggagggggtcggcggttcgatcccgtcatcacccaccacttcGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGgcgc > 2:2459683‑M1/50‑150 (MQ=255) aCGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTT < 2:2618338‑M1/150‑1 (MQ=255) aCGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTT > 1:2265761‑M1/1‑150 (MQ=255) gACCCACCATCCTTAATGATTACGGCAGCATAATCCCGCTTGGGGTGGTTTGCTCTGTTGTTAGTGCTGTTGACTTTTAATCTTTTGGTCGCTGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCTTTAGGGCGCtttttta < 1:711946/150‑2 (MQ=17) gACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTG > 1:3976726‑M1/1‑150 (MQ=255) gACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTG < 2:1892196‑M1/150‑1 (MQ=255) aCCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGC > 1:2210344‑M1/1‑150 (MQ=255) caccaTCCTTAATGATTAAGGAAGCTTAAGCCCCGAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTAT < 1:3073243‑M1/150‑1 (MQ=255) caccaTCCTGAATGATTAAGGCAGCATAATCCTGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTAT < 1:928927‑M1/150‑1 (MQ=255) ccaTCCTGAATGATTAAGGCATCATAAGGCCGCTTGGGGTCTTTAGCTCAGTGGGTAGTGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCt < 1:2090834/150‑1 (MQ=17) tCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGC‑TTTTTGCTATCTGCGa < 1:122045/150‑1 (MQ=255) ccTGAATGATTAAGGCAGCCTAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTACAGGCGCTTTTTTGCTATCTGCGa < 2:2852943/150‑1 (MQ=255) ccTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGa < 1:1332306/150‑1 (MQ=255) tGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATa < 1:3410550/150‑1 (MQ=255) aTTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCaaa > 2:2812544/1‑150 (MQ=255) ggCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTc < 2:144751/150‑1 (MQ=255) agcaTAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGaa < 2:1623154/150‑1 (MQ=255) gcaTAATCCCGCCAGGGGTCGTGAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAAc < 1:813411/150‑1 (MQ=255) aTCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttgtaaa < 2:2265761‑M1/150‑29 (MQ=255) ccGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCGATCTGCGATACTCAAAGATTCGAACCTgcagcc > 2:1314419/1‑149 (MQ=38) gCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAgg > 2:752396/1‑150 (MQ=35) gCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAgg > 2:3269927/1‑150 (MQ=35) aGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGttt < 1:2812544/150‑1 (MQ=33) cGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTttgagttg < 1:3823218/150‑1 (MQ=32) gTTAGCTCAGTTGGTAGAGCAGTTGACTTTTACTCACTTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTttgagttga < 2:3914020/150‑1 (MQ=17) gTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTttgagttga > 1:190506/1‑150 (MQ=32) cTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttgtcaacctgatgacatcgtcagagc > 2:3342215‑M1/1‑102 (MQ=255) cTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCa < 1:2939113/150‑1 (MQ=32) tCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAg > 1:3495449/1‑150 (MQ=32) tCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAg < 1:1130399/150‑1 (MQ=32) gTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGAAGCTGGTTTGAGATGAGCTCAgaga > 2:2339446/1‑150 (MQ=11) gTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATAATCGATACACAAATATAAGTAACTGAACCTGGTTTGAGGTGAtcgccgaga > 2:1638709/1‑145 (MQ=11) tGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGaaa < 1:100831/150‑1 (MQ=32) ggTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAaac > 2:1935175/1‑150 (MQ=32) ggTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAaac > 2:1936220/1‑150 (MQ=32) gTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAaaca > 2:2397446/1‑150 (MQ=32) tcAGTTGACTTTTAATCTATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGa < 2:649537/149‑1 (MQ=17) gCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAAACTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGa > 1:4011027/1‑150 (MQ=17) gTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGcc > 2:1419961/1‑150 (MQ=32) gACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCt > 1:797510/1‑150 (MQ=32) gACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCt > 1:250784/1‑150 (MQ=32) aCTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGCTACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTc > 1:3116736/1‑150 (MQ=17) ttttAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCCAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAACCAACGGAGCCGCTcgc > 2:457177/1‑150 (MQ=17) ttttAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAAACTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTcgc > 1:335600/1‑150 (MQ=17) ttttAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATATGCGATACACAAAGATACGAACCTGAACCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTcgc > 1:4148115/1‑150 (MQ=11) tCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGAc > 1:1068126/1‑150 (MQ=32) tCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATATGCGAAACACAAATATTCGAACCTGAAGCAGGTTTGAGTTGAGCGCAGCGAGACAACGGAGCCGCTAGCGTCGAc > 2:4116163/1‑150 (MQ=11) aaTTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACGACGGAGCCGCTCGCGGCGACgg > 2:2539358/1‑150 (MQ=17) aaTTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGATATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACgg < 2:3699353/150‑1 (MQ=17) tCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCAGCGATACTAAAATATACGATACTGCAGCAGGTTTGATGTGATCGCAGCGAAGCTACGGCGCCGCTCGCGGCGACGGCCAGaa > 1:16934/1‑150 (MQ=11) ggTTCGAATCCTGCACGACCCACCAATGTAAAAATGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGgcg < 2:2359324/150‑1 (MQ=17) ttCGACTCCGGCACCCCCCACCAATTAAAAAAAGCGCCCTAACGGCGCTTTTTTGCTATCTGCGATACACAAAGATTCGACCCTGCCGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGgcgag < 2:1917591/150‑1 (MQ=11) aaTCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTGTTTTGCTATCTGCGATACTCAAAGATGCGAACCTGCAGCAGGTGGGAGGTGAGCGCAGCGAACCAACGGAGCCGCTCGCGGCGACGGCCCGCCGGgcgcgcgcc > 2:326169/1‑148 (MQ=11) tCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttgtaaacctgatgacatcgtcagagcttactgtgcaagcaactctatgtcggtggaattaggcgtaaaatgacgc > 2:2197783‑M1/1‑53 (MQ=255) tCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGagcgaagc > 1:1433461/1‑150 (MQ=32) tCCTGCACGACCCACCAATGTAAAAAAGCGCCATAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCTGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGagcgaagc < 2:1237932/150‑1 (MQ=17) cTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttgtaaacctgatgacatcgtcagagcttactgtgcaagcaactctatgtcggtggaattaggcgtaaaatgacgcat > 1:1151334‑M1/1‑51 (MQ=255) gCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttgtaaacctgatgacatcgtcagagcttactgtgcaagcacctctatgtcggtggaattaggcgtaaaatgacgcatcc > 1:547393‑M1/1‑49 (MQ=255) aCGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttttaaacctgatgacatcgtcagagcttactgtgcaagcaactctatgtcggtggaattaggcgtaaaatgacgcatcctg < 2:133093‑M1/150‑104 (MQ=255) gACCCACCCATGTAAAAAAGCGCCCTACAGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttgtaaacctgatgacatcgtcagagcttactgtgcaagcacctctctggcggtggacttaggcgtaaaatgacgcatcctgca > 2:8948‑M1/1‑45 (MQ=255) gACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttgtaaacctgatgacatcgtcagagcttactgtgcaagcaactctatgtcggtggaattaggcgtaaaatgacgcatcctgca > 2:2067872‑M1/1‑45 (MQ=255) gACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGCGTCATc > 1:2896384/1‑150 (MQ=17) ccaccaATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAATGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGACGGGCGAGCGAAGCGAGTCATCCTg > 2:1213749/1‑150 (MQ=17) ccaccaATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGATCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGGCATCCTg > 1:1263686/1‑150 (MQ=17) accaATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttgtaaacctgatgacatcgtcagagcttactgtgcaagcaactctatgtcggtggaattaggcgtaaaatgacgcatcctgcacatta > 2:876263‑M1/1‑40 (MQ=255) accaATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttgtaaacctgatgacatcgtcagagcttactgtgcaagcaactctatgtcggtggaattaggcgtaaaatgacgcatcctgcacatta < 2:465347‑M1/150‑111 (MQ=255) caATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttgtaaacctgatgacatcgtcagagcttactgtgcaagcaactctatgtcggtggaattaggcgtaaaatgacgcatcctgcacattagg < 1:1180044‑M1/150‑113 (MQ=255) caATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttgtaaacctgatgacatcgtcagagcttactgtgcaagcaactctatgtcggtggaattaggcgtaaaatgacgcatcctgcacattagg < 1:1912375‑M1/150‑113 (MQ=255) caATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttgtaaacctgatgacatcgtcagagcttactgtgcaagcaactctatgtcggtggaattaggcgtaaaatgacgcatcctgcacattagg > 2:1803038‑M1/1‑38 (MQ=255) tGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttgtaaacctgatgacatcgtcagagcttactgtgcaagcaactctatgtcggtggaattaggcgtaaaatgacgcatcctgcacattaggcgt > 2:2699197‑M1/1‑35 (MQ=255) gTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttgtaaacctgatgacatcgtcagagcttactgtgcaagcaactctatgtcggtggaattaggcgtaaaatgacgcatcctgcacattaggcgta > 2:2677642‑M1/1‑34 (MQ=255) tAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttgtaaacctgatgacatagtcagagcttactgtgcaagcaactctatgtcggtggaattaggcgtaaaatgatgcatcctgcacattaggcgtaa > 1:3931232‑M1/1‑33 (MQ=255) aaaaaaGCGCCTTTAGGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttgtaaacctgatgacatcgtcagagcttactgtgcaagcaactctatgtcggtggaattaggcgtaaaatgacgcatcctgcacattaggcgtaat > 2:3527394‑M1/1‑32 (MQ=255) aaaaaaGCGCCCTAAAGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttgtaaacctgatgacatcgtcagagcttactgtgcaagcaactctatgtcggtggaattaggcgtaaaatgacgcatcctgcacattaggcgtaat < 2:2127333‑M1/150‑119 (MQ=255) aaaaaaGCGCCCTAAAGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttgtaaacctgatgacatcgtcagagcttactgtgcaagcaactctatgtcggtggaattaggcgtaaaatgacgcatcctgcacattaggcgtaat < 2:1390104‑M1/150‑119 (MQ=255) aaaaaaGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACccac > 2:3348217/1‑150 (MQ=32) aaaaaGCGCCTTTAGGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTAGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACccacc > 1:959622/1‑150 (MQ=255) aaaaGCGCCTTTAGGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACccacca > 1:2988487/1‑150 (MQ=12) aaaaGCGCCCTAAAGGCGCTTTTTTTCTATtaaggcatcctcaatttcactttgtaaaactgattacatcgtcagagcttacagtgcaagcaactctatgtcggtggaattaggcgtaaaatgacgcatcctgcacattaggcgtaattc > 1:2018167‑M1/1‑30 (MQ=255) aaaaGCGCCCTAAAGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttgtaaacctgatgacatcgtcagagcttactgtgcaagcaactctatgtcggtggaattaggcgtaaaatgacgcatcctgcacattaggcgtaattc > 1:2568710‑M1/1‑30 (MQ=255) aaaaGCGCCCTAAAGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttgtaaacctgatgacatcgtcagagcttactgtgcaagcaactctatgtcggtggaattaggcgtaaaatgacgcatcctgcacattaggcgtaattc > 2:4003504‑M1/1‑30 (MQ=255) aaaGCGCCTTTAGGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCaa > 2:3064301/1‑150 (MQ=12) aaGCGCCCTCAAGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttgtaaacctgatgacatcgtcagagcttactgtgcaagcaacactatgtcggtggaattaggcgtaaaatgacgcatcctgcacattaggcgtaattcga < 2:3116736‑M1/150‑123 (MQ=255) aaGCGCCCTAAAGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttgtaaacctgatgacatcgtcagagcttactgtgcaagcaactctatgtcggtggaattaggcgtaaaatgacgcatcctgcacattaggcgtaattcga < 2:4011027‑M1/150‑123 (MQ=255) aaGCGCCCTAAAGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttgtaaacctgatgacatcgtcagagcttactgtgcaagcaactctatgtcggtggaattaggcgtaaaatgacgcatcctgcacattaggcgtaattcga < 2:571005‑M1/150‑123 (MQ=255) aaGCGCCCTAAAGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttgtaaacctgatgacatcgtcagagcttactgtgcaagcaactctatgtcggtggaattaggcgtaaaatgacgcatcctgcacattaggcgtaattcga < 2:805274‑M1/150‑123 (MQ=255) aaGCGCCCTAAAGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttgtaaacctgatgacatcgtcagagcttactgtgcaagcaactctatgtcggtggaattaggcgtaaaatgacgcatcctgcacattaggcgtaattcga < 2:2022156‑M1/150‑123 (MQ=255) aGCGCCCTAAAGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttgtaaacctgatgacatcgtcagagcttactgtgcaagcaactctatgtcggtggaattaggcgtaaaatgacgcatcctgcacattaggcgtaattcgag < 2:3197824‑M1/150‑124 (MQ=255) ccTAAAGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttgtaaacctgatgacatcgtcagagcttactgtgcaagcaactctatgtcggtggaattaggcgtaaaatgacgcatcctgcacattaggcgtaattcgagtgact > 2:140512‑M1/1‑22 (MQ=255) cTAAAGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttgtaaacctgatgacatcgtcagagcttactgtgcaagcaactctatgtcggtggaattatgcgtaaaatgacgcatcctgcacattaggcgtaattcgagtgactt > 1:3716493‑M1/1‑21 (MQ=255) cTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTAGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTaaaaa > 1:429789/1‑150 (MQ=17) cTAAAGGCGCTATTTTGCTATCTGCGATACTCAAAGATACGAACCTGCAGCAGCTTTGAGTTGAGCGCAGCGAAACAAAGCAGCCGCTCGCGGCGACGGCACGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTaaaaa > 2:1065951/1‑150 (MQ=11) | AGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAA > NC_000913/781522‑781817 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |