| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 781,670 | A→T | 5.1% | intergenic (+18/‑415) | lysQ → / → nadA | tRNA‑Lys/quinolinate synthase, subunit A |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 781,670 | 0 | A | T | 5.1% | 722.8 / 27.6 | 237 | intergenic (+18/‑415) | lysQ/nadA | tRNA‑Lys/quinolinate synthase, subunit A |
| Reads supporting (aligned to +/- strand): ref base A (124/97); new base T (10/2); total (135/102) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.62e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.06e-01 | |||||||||||
Only 100 of 244 total aligned reads displayed.
AGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAA > NC_000913/781522‑781818 | acctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccacttcGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTaa < 2:1566098‑M1/95‑1 (MQ=255)acctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccacttcGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTaa < 2:3104501‑M1/95‑1 (MQ=255)acctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccacttcGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTaa < 2:1006350‑M1/95‑1 (MQ=255)aGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAA > 1:1917591‑M1/1‑150 (MQ=255) cctcccttacatggagggggtcggcggttcgatcccgtcatcacccaccacttgGGGTCTTTAGCTCAGTTGGTAGAGCTGTTGACTTTTAATCATTTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTaaa > 1:1402431‑M1/55‑150 (MQ=255) cctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccacttcGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTaaa > 2:1266894‑M1/55‑150 (MQ=255) tCATCCTGCACGACCCACCATCCTTAATTATTAAGGCAGCATAATCCCGCTAGGGGTCGTTAGCTCAGTTGGTAGAGCTGTTTACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAAAAGCGCCCTAAAG < 1:869226‑M1/150‑1 (MQ=255) tCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAG < 2:3468492‑M1/150‑1 (MQ=255) tCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAATCGCCCTAAAGGCG > 1:133093‑M1/1‑150 (MQ=255) tCCTGCACGACCCACCAACCTGAATGAGAAACGCAGCATAAACCCTCAAGGGTTCGTAAGCTCAGTTGGTAGAGCAGTTGACATTTAATCAATAGGTCGCAGGATCGAAACCTTCACGACCCACCAATGTAAAAAAGCGCCCTATAGgcg > 2:2816753/1‑150 (MQ=17) ccttacaaggagggggtcggcggttcgatcccgtcatcacccaccacttcGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGgcg < 2:1881023‑M1/100‑1 (MQ=255) cttacaaggagggggtcggcggttcgatcccgtcatcacccaccacttcGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGgcgc > 2:2420897‑M1/50‑150 (MQ=255) ttacaaggagggggtcggcggttcgatcccgtcatcacccaccacttcGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCt < 1:2248657‑M1/102‑1 (MQ=255) aCGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTT > 1:2265760‑M1/1‑150 (MQ=255) gACCCACCATCCTTAATGATTACGGCAGCATAATCCCGCTTGGGGTGGTTTGCTCTGTTGTTAGTGCTGTTGACTTTTAATCTTTTGGTCGCTGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCTTTAGGGCGCtttttta < 1:711946/150‑2 (MQ=17) gACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTG > 1:3976726‑M1/1‑150 (MQ=255) aCCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGAAGGTTCTAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGC < 2:3286498‑M1/150‑1 (MQ=255) caccaTCCTTAATGATTAAGGAAGCTTAAGCCCCGAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTAT < 1:3073243‑M1/150‑1 (MQ=255) accaTCCTGTATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTACTCAATTGGTCGCCGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATc < 1:1873091/150‑1 (MQ=255) acaTCCTGAATGATTAATGCAGCATATTCCCGCATGGGGTCTTTAGCTAAGTTGGTAGTGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCt < 1:2298426/149‑1 (MQ=17) tCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGC‑TTTTTGCTATCTGCGa < 1:122045/150‑1 (MQ=255) ccTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGa < 1:1332306/150‑1 (MQ=255) tGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATa < 1:3410550/150‑1 (MQ=255) tGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATa > 2:256512/1‑150 (MQ=255) aTTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTACAGGCGCTTTTTTGCTATCGGCGATACTCaac > 2:2621204/1‑149 (MQ=255) aTTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATgcaggcatcaaaaa > 2:1581212‑M1/1‑136 (MQ=255) tAAGGCAGCATACTCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGa < 2:1936550/150‑1 (MQ=255) gcaTAATCCCGCCAGGGGTCGTGAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAAc < 1:813411/150‑1 (MQ=255) gCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAgg > 2:752396/1‑150 (MQ=35) aGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGttt < 1:2812544/150‑1 (MQ=33) gggTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTttga < 2:1625983/150‑1 (MQ=32) gggTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTttga < 2:1181263/150‑1 (MQ=32) cGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTttgagttg < 1:3823218/150‑1 (MQ=32) gTTAGCTCAGTTGGTAGAGCAGTTGACTTTTACTCACTTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTttgagttga < 2:3914020/150‑1 (MQ=17) gtAGCTCAGTGGGTAGCGCAGTTGACTTGTAATCTATGGGGCGCAGGTTCGAATCCTGCACGACCCACCAAGGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTttgagttgag < 2:2184005/149‑1 (MQ=11) cTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCa > 2:3343200/1‑150 (MQ=32) cTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCa < 1:2939113/150‑1 (MQ=32) tCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAg < 1:1130399/150‑1 (MQ=32) tCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAg < 2:2234059/150‑1 (MQ=32) tCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAg > 1:3495449/1‑150 (MQ=32) tGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGaaa < 1:100831/150‑1 (MQ=32) ggTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAaac > 2:1905051/1‑150 (MQ=32) ggTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTAAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAaac > 2:1936002/1‑150 (MQ=17) tcAGTTGACTTTTAATCTATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGa < 2:649537/149‑1 (MQ=17) gCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAAACTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGa > 1:4011027/1‑150 (MQ=17) gCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGAAACTCAAAGATTAGAAACTGCAGCAGGTTTGATATTAGCGCAGAGAAACAACAGa > 1:2022156/1‑150 (MQ=11) gACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCt > 1:250784/1‑150 (MQ=32) gACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCt > 1:797510/1‑150 (MQ=32) aCTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGCTACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTc > 1:3116736/1‑150 (MQ=17) ttttAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCCAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAACCAACGGAGCCGCTcgc > 2:457177/1‑150 (MQ=17) ttttAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAAACTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTcgc > 1:335600/1‑150 (MQ=17) ttttAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATATGCGATACACAAAGATACGAACCTGAACCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTcgc > 1:4148115/1‑150 (MQ=11) tCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGAc > 1:1438062/1‑150 (MQ=32) tCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGAc > 1:1068126/1‑150 (MQ=32) tCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATATGCGAAACACAAATATTCGAACCTGAAGCAGGTTTGAGTTGAGCGCAGCGAGACAACGGAGCCGCTAGCGTCGAc > 2:4116163/1‑150 (MQ=11) aaTTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACgg < 2:1327029/150‑1 (MQ=32) aaTTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGATATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACgg < 2:3699353/150‑1 (MQ=17) tCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTAGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGaa > 2:3387034/1‑150 (MQ=17) cAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTACAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAggg < 2:2276884/150‑1 (MQ=17) ggTTCGACTCCTGCCCGACCCACCAATGTAAAAAAGGGCCCTAAAGGCGCTTTTTTGCTATCTGCTATACTCATAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGTAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGgcg < 2:2359318/150‑1 (MQ=11) ttCGACTCCTGCACGCCCCACCCATGTAAAAACGCGCCCTCCCGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGACCCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGgcgag < 2:1917632/150‑1 (MQ=11) ttCGAATCCTGCACGACCCACCATTGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGgcgag < 2:3057072/150‑1 (MQ=17) ttCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGgcgag < 2:2067346/150‑1 (MQ=32) tgcGAATCCTGCACGACCCACCTATTTAAAAACGCGCCCTAAAGGCGATTTTTTGCTATATGCGATACTCAAAGATTCGAACCTGCAGCCGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCTGCGACGGCCCGAAGGgcgag < 2:2477464/148‑1 (MQ=11) aaTCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGAAACTCAAAGATAAGAACCTGAAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGagcgaa > 2:1409741/1‑150 (MQ=255) aTCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttgtaaacctgatgacatcgtcagagcttactgtgcaagcaactctatgtcggtggaattaggcgtaaaatgacg > 2:326919‑M1/1‑54 (MQ=255) tCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttgtaaacctgatgacatcgtcagagcttactgtgcaagcaactctatgtcggtggaattaggcgtaaaatgacgc > 2:3228281‑M1/1‑53 (MQ=255) cTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttgtaaacctgatgacatcgtcagagcttactgtgcaagcaactctatgtcggtggaattaggcgtaaaatgacgcat > 1:1151334‑M1/1‑51 (MQ=255) gCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttgtaaacctgatgacatcgtcagagcttactgtgcaagcacctctatgtcggtggaattaggcgtaaaatgacgcatcc > 1:547393‑M1/1‑49 (MQ=255) cACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGATTGAGATGAGCGCAGCGAAACAACGCACCCGCACGCGGCGACGGCCCGAAGGGCGACCGAAGCCAgac > 2:2712995/1‑148 (MQ=11) aCGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCATTTTTGCTATtcaggcatcctcaatttcactttgtaaacctgatgacatcgtcagagcttactgtgcaagcaactctatgtcggtggaattaggcgtaaaatgacgcatcctg < 2:133099‑M1/150‑104 (MQ=255) gACCCACCCATGTAAAAAAGCGCCCTACAGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttgtaaacctgatgacatcgtcagagcttactgtgcaagcacctctctggcggtggacttaggcgtaaaatgacgcatcctgca > 2:8948‑M1/1‑45 (MQ=255) gACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGCGTCATc > 1:2896384/1‑150 (MQ=17) ccaccaATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttgtaaacctgatgacatcgtcagagcttactgtgcaagcaactctatgtcggtggaattaggcgtaaaatgacgcatcctgcacat > 2:318861‑M1/1‑42 (MQ=255) ccaccaATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACGTGCAGCAGGTTTGAGTTGAGCGCAGCGATACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTg > 2:1213800/1‑150 (MQ=17) ccaccaATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGATCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGGCATCCTg > 1:1263686/1‑150 (MQ=17) accaATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttgtaaacctgatgacatcgtcagagcttactgtgcaagcaactctatgtcggtggaattaggcgtaaaatgacgcatcctgcacctta > 2:2393802‑M1/1‑40 (MQ=255) accaATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttgtaaacctgatgacatcgtcagagcttactgtgcaagcaactctatgtcggtggaattaggcgtaaaatgacgcatcctgcacatta > 2:876263‑M1/1‑40 (MQ=255) accaATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttgtaaacctgatgacatcgtcagagcttactgtgcaagcaactctatgtcggtggaattaggcgtaaaatgacgcatcctgcacatta < 2:465347‑M1/150‑111 (MQ=255) caATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttgtaaacctgatgacatcgtcagagcttactgtgcaagcaactctatgtcggtggaattaggcgtaaaatgacgcatcctgcacattagg < 1:1180044‑M1/150‑113 (MQ=255) caATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttgtaaacctgatgacatcgtcagagcttactgtgcaagcaactctatgtcggtggaattaggcgtaaaatgacgcatcctgcacattagg < 1:1908355‑M1/150‑113 (MQ=255) actgtAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttgtaaacctgatgacatcgtcagagcttactgtgcaagcaactctatgtcggtggaattaggcgtaaaatgacgcatcctgcacattaggc < 1:2093773‑M1/148‑114 (MQ=255) gTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttgtaaacctgatgacatcgtcagagcttactgtgcaagcaactctatgtcggtggaattaggcgtaaaatgacgcatcctgcacattaggcgta > 2:2677644‑M1/1‑34 (MQ=255) tAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttgtaaacctgatgacatagtcagagcttactgtgcaagcaactctatgtcggtggaattaggcgtaaaatgatgcatcctgcacattaggcgtaa > 1:3931232‑M1/1‑33 (MQ=255) aaaaaaGCGCCTTTAGGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttgtaaacctgatgacatcgtcagagcttactgtgcaagcaactctatgtcggtggaattaggcgtaaaatgacgcatcctgcacattaggcgtaat > 2:3527394‑M1/1‑32 (MQ=255) aaaaaaGCGCCTTTAGGGCGCTTTTTTGCTATtaaggcatcctcaatttcactttgtaaacctgatgacatcgtcagagcttactgtgcaagcaactctatgtcggtggaattaggcgtaaaatgacgcatcctgcacattaggcgtaat > 1:92976‑M1/1‑32 (MQ=255) aaaaaaGCGCCCTAAAGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttgtaaacctgatgacatcgtcagagcttactgtgcaagcaactctatgtcggtggaattaggcgtaaaatgacgcatcctgcacattaggcgtaat < 2:1390143‑M1/150‑119 (MQ=255) aaaaGCGCCTTTAGGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACccacca > 1:2988487/1‑150 (MQ=12) aaaaGCGCCCTAAAGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttgtaaacctgatgacatcgtcagagcttactgtgcaagcaactctatgtcggtggaattaggcgtaaaatgacgcatcctgcacattaggcgtaattc > 2:4003504‑M1/1‑30 (MQ=255) aaaaGCGCCCTAAAGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttgtaaacctgatgacatcgtcagagcttactgtgcaagcaactctatgtcggtggaattaggcgtaaaatgacgcatcctgcacattaggcgtaattc > 1:2568710‑M1/1‑30 (MQ=255) aaGCGCCCTAAAGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttgtaaacctgatgacatcgtcagagcttactgtgcaagcaactctatgtcggtggaattaggcgtaaaatgacgcatcctgcacattaggcgtaattcga < 2:3402053‑M1/150‑123 (MQ=255) aaGCGCCCTAAAGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttgtaaacctgatgacatcgtcagagcttactgtgcaagcaactctatgtcggtggaattaggcgtaaaatgacgcatcctgcacattaggcgtaattcga < 2:1701345‑M1/150‑123 (MQ=255) aaGCGCCCTAAAGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttgtaaacctgatgacatcgtcagagcttactgtgcaagcaactctatgtcggtggaattaggcgtaaaatgacgcatcctgcacattaggcgtaattcga < 2:805274‑M1/150‑123 (MQ=255) aaGCGCCCTAAAGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttgtaaacctgatgacatcgtcagagcttactgtgcaagcaactctatgtcggtggaattaggcgtaaaatgacgcatcctgcacattaggcgtaattcga < 2:571005‑M1/150‑123 (MQ=255) aaGCGCCCTAAAGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttgtaaacctgatgacatcgtcagagcttactgtgcaagcaactctatgtcggtggaattaggcgtaaaatgacgcatcctgcacattaggcgtaattcga < 2:4011027‑M1/150‑123 (MQ=255) gcgcCCTAAAGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttgtaaacctgatgacatcgtcagagcttactgtgcaagcaactctatgtcggtggaattaggcgtaaaatgacgcatcctgcacattaggcgtaattcgagt > 2:2078280‑M1/1‑26 (MQ=255) gcCCTAATGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttgtaaacctgatgacatcgtcagagcttactgtgcaagcaactctatgtcggtggaattaggcgtaaaatgacgcatcctgcacattaggcgtaattcgagtga < 2:1433421‑M1/150‑127 (MQ=255) cccTAAAGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttgtaaacctgatgacatcgtcagagcttactgtgcaagcaactctatgtcggtggaattaggcgtaaaatgacgcatcctgcacattaggcgtaattcgagtgac < 2:110308‑M1/150‑128 (MQ=255) cTAAAGGCGCTTTTTTGCTATtcaggcatcctcaatttcactttgtaaacctgatgacatcgtcagagcttactgtgcaagcaactctatgtcggtggaattatgcgtaaaatgacgcatcctgcacattaggcgtaattcgagtgactt > 1:3716493‑M1/1‑21 (MQ=255) cTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTAGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTaaaaa > 1:429789/1‑150 (MQ=17) | AGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAA > NC_000913/781522‑781818 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |