| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,074,691 | C→G | 6.5% | intergenic (+33/‑88) | flu → / → yeeR | CP4‑44 prophage; antigen 43 (Ag43) phase‑variable biofilm formation autotransporter/CP4‑44 prophage; putative membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,074,691 | 0 | C | G | 6.5% | 1030.9 / 48.4 | 293 | intergenic (+33/‑88) | flu/yeeR | CP4‑44 prophage; antigen 43 (Ag43) phase‑variable biofilm formation autotransporter/CP4‑44 prophage; putative membrane protein |
| Reads supporting (aligned to +/- strand): ref base C (147/126); new base G (5/14); total (152/141) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.04e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.42e-01 | |||||||||||
Only 100 of 309 total aligned reads displayed.
GAAGCCCGTGTCCGGGAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCAGGATTTGCCATTCTTCGCCTTTT > NC_000913/2074542‑2074840 | gAAGCCCGTGTCCGGGAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGtcatc > 2:1224080/1‑150 (MQ=255)gAAGCCCGTGTCCGGGAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGtcatc > 2:2520427/1‑150 (MQ=255) cccGTGTCCGGGAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGa < 2:2944030/150‑1 (MQ=255) cccGTGTCCGGGAAAATATCACCCGGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGa < 1:3747851/150‑1 (MQ=255) ccGTGTCCGGGAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGAc > 2:1443347/1‑150 (MQ=255) gtgtCCGGGAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCg > 2:3438094/1‑150 (MQ=255) tgtCCGGGAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCgg < 1:2251839/150‑1 (MQ=255) gtCCGGGAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATGATGACCggg < 1:2683420/150‑1 (MQ=255) tCCGGGAAAATATCACCCGGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATGATGACCGGGa < 1:3640933/150‑1 (MQ=255) cGGGAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGAcc < 2:2066652/150‑1 (MQ=255) aaaTATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGAc > 1:3442815/1‑150 (MQ=255) ccTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCacc > 1:4189416/1‑148 (MQ=255) ccTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCCGCGCAAc > 1:964486/1‑150 (MQ=255) cTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACg > 2:3372566/1‑150 (MQ=255) cTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACg > 1:769614/1‑150 (MQ=255) cTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCAAGACCGGGACC‑CGGACCGGCGCAACg > 1:1736895/1‑150 (MQ=255) cTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCAACGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACg > 1:3820624/1‑150 (MQ=255) tGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACgg > 2:3591021/1‑150 (MQ=255) gggCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGa > 2:4148718/1‑150 (MQ=255) gCGTTCCGGCCGGTTCTGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGCCAGAACCAGCGCCTCTGGGGGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATc < 2:3924966/150‑1 (MQ=255) gCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATc < 2:233089/150‑1 (MQ=255) gCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATc < 2:1302667/150‑1 (MQ=255) aGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAAc > 1:1428079/1‑150 (MQ=255) aGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAAc > 1:2332495/1‑150 (MQ=255) ggCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACg > 2:2603526/1‑150 (MQ=255) ccGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTAAACGcc > 1:3243714/1‑150 (MQ=255) ttATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACAt > 2:4197544/1‑150 (MQ=255) aTGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTc > 2:3278043/1‑150 (MQ=255) cccACAGCGTCAGCGGCAGCAGCGCTGAAGGGTCTAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGACCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGcg > 2:1083546/1‑149 (MQ=255) cccACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCt > 1:2105046/1‑150 (MQ=255) ccACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATTACCGGGACC‑CGGACCGGCGCAACGGATCTTCAAAGCCACATTCGCTg > 2:1608206/1‑150 (MQ=255) ccACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTg > 2:352166/1‑150 (MQ=255) cacaGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTgg > 1:3941403/1‑150 (MQ=255) cacaGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTgg > 2:2232293/1‑150 (MQ=255) cacaGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTgg > 2:615701/1‑150 (MQ=255) acaGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGc > 2:4065757/1‑150 (MQ=255) gTCAGCGGCAGCTGCGCTTATGGGTATAACGGTCTGGCCACACTGAATGTGACCTTCTGACACAACCATCGCATCTCTGTGGCCCCGGTCATAATGCCGGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTaa < 1:2577472/150‑1 (MQ=255) gTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTaa < 2:508221/150‑1 (MQ=255) gTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTaa < 2:672072/150‑1 (MQ=255) gTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTaa < 2:2273570/150‑1 (MQ=255) gTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTaa < 2:3034510/150‑1 (MQ=255) tCAGCGGCAGCTGCGATGAAGGTTATAAGGTTCCGGCCACACTGATTGTGACCTTCTGACATAACCATCGCCTCTCTGTGGTCCGGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAAc < 1:3367025/150‑1 (MQ=255) tCAGCGGCAGCCGCTCTTATGGGTATAACGGTCTGGCAACACTTAATGTGACCTTCTTAAAGAACCATCCCCTATCTGTGGTCCCGGTCAACTGGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAAc < 1:1669492/150‑1 (MQ=255) tCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAAc > 2:3096742/1‑150 (MQ=255) gCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAAt > 1:2948338/1‑150 (MQ=255) cGGCAGCAGCGCTGAAGGGTATAACGGTCTGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATa < 2:3953212/150‑1 (MQ=255) ggCAGCTGCGCTGATGGGTATACGGGTCAGGCCACAGTGAATGTGACATTCTGACAGAACAACCGCCTCTCTGTGTTCCGGGACATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATaa < 1:3792617/150‑1 (MQ=255) ggCAGCAGCGGTTATGGTTATACGGTTCAGGCCACACTTATTGTGACCTTCTTACACACCCATCGCCTCTGTGTGGTCCGGGTAATCTTGACGGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATaa < 1:1171728/150‑1 (MQ=255) gcagcaGCGCTGAAGGTTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAAc < 1:3139843/150‑1 (MQ=255) gcagcaGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAAc < 2:2420519/150‑1 (MQ=255) cagcagCGCTGACGGGTATAACGGTCCGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACa < 1:1283338/150‑1 (MQ=255) cagcagCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACa < 2:2689988/150‑1 (MQ=255) gcagcGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATg > 2:1623810/1‑150 (MQ=255) cagcGCTGATGGGTATAAGGGTCTGGCCACACTGATTGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGGCCCGGTCATCTTGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGa < 1:2473972/150‑1 (MQ=255) cagcGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGCCC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCAGTAACAATAACATGa > 2:3454992/1‑150 (MQ=255) agcGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGat < 2:2920816/150‑1 (MQ=255) tGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCTTGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATtca < 2:936202/150‑1 (MQ=255) tataACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGa > 1:1063496/1‑150 (MQ=255) taACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGCGt > 1:2910369/1‑150 (MQ=255) taACGGTCAGGCCACACTCAATGTGACCTTCTCACACAACCATCGCCACTCTGTGGTCCCGGTCATCATGACCGGCACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGt < 1:3036215/150‑1 (MQ=255) aaCGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGGCC‑CGGACCGGCGCAACGGATCTTAAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTg > 1:667481/1‑150 (MQ=255) aCGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGa < 2:1878200/150‑1 (MQ=255) cGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGAc < 1:3083130/150‑1 (MQ=255) cGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGAc < 2:3133674/150‑1 (MQ=255) gTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGGCC‑CGGACCGGCGCAACGGATCTTCAACGCCACAATCGCTGGCATTAACAATAACATGATATTAATCACGGAGTGACTa > 1:1444807/1‑150 (MQ=255) ggCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGtt > 2:2877986/1‑150 (MQ=255) gCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTa > 2:761093/1‑150 (MQ=255) cacaCTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCCTGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACa < 2:839189/150‑1 (MQ=255) acacTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTACAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAg > 2:3822262/1‑150 (MQ=255) cacTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGa < 2:1142378/150‑1 (MQ=255) cTGATTGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATa < 1:2116356/150‑1 (MQ=255) cTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATa < 1:1795177/150‑1 (MQ=255) cTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATa > 2:1509744/1‑150 (MQ=255) aTGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCg < 1:4115199/150‑1 (MQ=255) gtgACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGgc > 2:2857320/1‑150 (MQ=255) gACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGgcgc > 2:2804287/1‑150 (MQ=255) ttCTGACAGAACCATCGCCTCTCTGTGGTTCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTg > 2:1954123/1‑150 (MQ=255) ttCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTAAACGCCACATTCGCTGGCCTTAACAATAACATTATATTCATCACGGAGTGACTATGTTACAGATAGTCGgcgcgcgg > 1:589999/1‑148 (MQ=255) tGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATc < 2:4162510/150‑1 (MQ=255) caaCCATCGCCTCTCTGTGGTCCCGTTCATCATGACCGGTACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCctgct < 1:1608206/149‑1 (MQ=255) aTCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCg > 2:1007824/1‑150 (MQ=255) aTCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCg > 2:3112332/1‑150 (MQ=255) aTCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCg > 2:365978/1‑150 (MQ=255) gCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCAg > 2:858236/1‑150 (MQ=255) ccTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCAgg > 2:1773589/1‑150 (MQ=255) tctctGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCAGGAt < 1:3494370/150‑1 (MQ=255) ctGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCAGGATTTg < 1:186591/150‑1 (MQ=255) tgtgGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCAGGATTTGc < 2:170508/150‑1 (MQ=255) gtgGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCAGGATTTGcc > 2:273287/1‑150 (MQ=255) tCCCGGTCATGATGACCGGGACCACAGAGAGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCAGGATTTGCCAtt > 2:2767440/1‑150 (MQ=255) tCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACCCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATCTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCAGGATTTGCCAttc > 2:3570143/1‑150 (MQ=255) ccGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCAGGATTTGCCAttctt < 1:517847/150‑1 (MQ=255) ccGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCAGGATTTGCCAgtctt > 1:912384/1‑150 (MQ=255) cGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCAGGATTTGCCAttcttc < 2:3745966/150‑1 (MQ=255) cGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCAGGATTTGCCAttcttc < 2:371580/150‑1 (MQ=255) cGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCAGGATTTGCCAttcttc > 2:577713/1‑150 (MQ=255) ggacatcatGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACCCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCAGGATTTGCCATTCTTCg < 1:191208/147‑1 (MQ=255) gTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCAGGATTTGCCATTCTTCGc < 2:2871447/150‑1 (MQ=255) tcatcaTGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCAGGATTTGCCATTCTTCGcc > 1:1241650/1‑150 (MQ=255) catGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCAGGATTTGCCATTCTTCGCCtttt < 1:3600157/150‑1 (MQ=255) | GAAGCCCGTGTCCGGGAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCAGGATTTGCCATTCTTCGCCTTTT > NC_000913/2074542‑2074840 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |