New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4443459	96 (0.860)	3 (0.030)	3/262	NT	3.2%	coding (1078/1734 nt)	tamA	translocation and assembly module for autotransporter export, outer membrane subunit
	?	NC_000913	= 4443482	91 (0.860)					coding (1101/1734 nt)	tamA	translocation and assembly module for autotransporter export, outer membrane subunit
Rejected: Frequency below/above cutoff threshold.

CAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4443306‑4443459 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctccagcgCAGGTTAATGGCACGCTGCCAGCCGCTGGAGAGATCCCAGTAGCGAGAAGCCACCAGCGTAGTGGAGTCAGATTCGGTATCGTTCAGGTCAGTGCGCTTAAAACCGCCCTGCACCAAATAATATTGTTCCAGTGGATTCTTCAGCAGC  <  NC_000913/4443482‑4443335                                                                                                                                                                                                                                                                                                                CAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACCGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCC                                                                                                                                                          <  1:566540/150‑1    cCCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACATTATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGC                                                                                                                                                       <  2:1183669/149‑1     CCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCG                                                                                                                                                      >  1:1259657/1‑150                                 GCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTG‑‑GGCTTCTCGCTACTGGGATCTCTCCAGCGCAGGTTAATGGCACGCTGCCAGCCGCTGGA                                                                                                                        <  2:1876689/150‑1                                    tAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGCAGGTTAATGGCACGCTGCCAGCCGCTGGAG                                                                                                                       <  1:1904863/149‑1                                       GAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGCTACCGATTCTGCCTCCACTCCGCTGGGGGCTTCTCGCTACTGGGCTCTCTCCAGCGCAGGTTAATGGCACGCTGCCAGCCGCTGGAGAGA                                                                                                                    <  1:752128/150‑1                                                                                                                                                   CTCCAGCGCAGGTTAATGGCACGCTGCCAGCCGCTGGAGAGATCCCAGTAGCGAGAAGCCACCAGCGTAGTGGAGTCAGATTCGGTATCGTTCAGGTCAGTGCGCTTAAAACCGCCCTGCACCAAATAATATTGTTCCAGTGGATTCTTC        >  1:1763538/1‑150                                                                                                                                                   CTCCAGCGCAGGTTAATGGCACGCTGCCAGCCGCTGGAGAGATCCCAGTAGCGAGAAGCCACCAGCGTAGTGGAGTCAGATTCGGTATCGTTCAGGTCAGTGCGCTTAAAACCGCCCTGCACCAAATAATATTGTTCCAGTGGATTCTTC        >  1:1864555/1‑150                                                                                                                                                    TCCAGCGCAGGTTAATGGCACGCTGCCAGCCGCTGGAGAGATCCCAGTAGCGAGAAGCCACCAGCGTAGTGGAGTCAGATTCGGTATCGTTCAGGTCAGTGCGCTTAAAACCGCCCTGCACCAAATAATATTGTTCTAGTGGATTCTgcc       >  2:355961/1‑147                                                                                                                                                     CCAGCGCAGGTTAATGGCACGCTGCCAGCCGCTGGAGAGATCCCAGTAGCGAGAAGCCACCAGCGTAGTGGAGTCAGATTCGGTATCGTTCAGGTCAGTGCGCTTAAAACCGCCCTGCACCAAATAATATTGTTCCAGTGGATTCTTCAG      >  1:1079934/1‑150                                                                                                                                                         CGCAGGTTAATGGCACGCTGCCAGCCGCTGGAGAGATCCCAGTAGCGAGAAGCCACCAGCGTAGTGGAGTCAGATTCGGTATCGTTCAGCTCAGTGCGCTTAAAACCGCCCTGCACCAAATAATATTGTTCCAGTGGATTCTTCAGCAGC  <  1:908723/150‑1                                                                                                                                                         CGCAGGGTCATGGCACGCATCCAGCCGCTGGAGAGTTCCCAGTTGCGAGAAGCCACCAGCGTAGTGGAGTCAGATTCTGTATCGTTCAGGTCAGTGCGCTTAAAACCGCCCTGCACCAATTAATATTGTTCCAGTGGATTCTTCAGCAGC  <  2:239285/150‑1                                                                                                                                                                                                                                                                                                                CAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4443306‑4443459 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctccagcgCAGGTTAATGGCACGCTGCCAGCCGCTGGAGAGATCCCAGTAGCGAGAAGCCACCAGCGTAGTGGAGTCAGATTCGGTATCGTTCAGGTCAGTGCGCTTAAAACCGCCCTGCACCAAATAATATTGTTCCAGTGGATTCTTCAGCAGC  <  NC_000913/4443482‑4443335

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.