| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,792,241 | A→T | 6.3% | intergenic (‑221/+26) | ydiV ← / ← nlpC | anti‑FlhD4C2 factor, inactive EAL family phosphodiesterase/putative C40 clan peptidase lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,792,241 | 0 | A | T | 6.3% | 316.2 / 6.0 | 110 | intergenic (‑221/+26) | ydiV/nlpC | anti‑FlhD4C2 factor, inactive EAL family phosphodiesterase/putative C40 clan peptidase lipoprotein |
| Reads supporting (aligned to +/- strand): ref base A (46/55); new base T (3/5); total (49/61) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.28e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 116 total aligned reads displayed.
TACAGAAGGAGTAACTTTCATTTGTTCCATGTTAACCACTTTTTCAGGGGTCCTTTTTTTAGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGAGGAACGCATCACTCCCTTGCTGGTAGAGGCGTGGATAAATTGGTTGTTGGTATCGTAAATACCTACA > NC_000913/1792092‑1792387 | tACAGAAGGAGTAACTTTCATTTGTTCCATGTTAACCACTTTTTCAGGGGTCCTTTTTTTAGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTa > 2:1171188/1‑150 (MQ=255)tACAGAAGGAGTAACTTTCATTTGTTCCATGTTAACCACTTTTTCAGGGGTCCTTTTTTTAGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTa > 2:1598540/1‑150 (MQ=255)tACAGAAGGAGTAACTTTCATTTGTTCCATGTTAACCACTTTTTCAGGGGTCCTTTTTTTAGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTa < 2:1510983/150‑1 (MQ=255) aCAGAAGGAGTAACTTTCATTTGTTCCATGTTAACCACTTTTTCAGGGGTCCTTTTTTTAGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTat < 1:815802/150‑1 (MQ=255) gAAGGAGTAACTTTCATTTGTTCCATGTTAACCACTTTTTCAGGGGTCCTTTTTTTAGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTatcat < 2:1368084/150‑1 (MQ=255) ggAGTAAGTTTCATTTGTTCCATGTTAACCACTTTTTCAGGGGTCCTTTTTTTAGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGc < 2:947182/150‑1 (MQ=255) ggAGTAACTTTCATTTGTTCCATGTTAACCACTTTTTCAGGGGTCCTTTTTTTAGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGc < 2:1874778/150‑1 (MQ=255) aGTAACTTTCATTTGTTCCATGTTAACCACTTTTTCAGGGGTCCTTTTTTTAGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATTGACGGCGATGTATCATCGCCg > 2:439740/1‑150 (MQ=255) tAACTTTCATTTGTTCCATGTTAACCACTTTTTCAGGGGTCCTTTTTTTAGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGATACATCGCCGTc < 1:1467624/150‑1 (MQ=255) tAACTATCATTTGTTCCATGTTAACCACTTTTTCAGGGGTCCTTTTTTTAGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTc < 1:888298/150‑1 (MQ=255) aaaCTTTCATTTGTTCCATGAGAACCACTTTTTCAGGGGTCCTTTTTTTAGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTc < 1:1207497/149‑1 (MQ=255) aaCTTTCATTTGTTCCATGTTAACCACTTTTTCAGGGGTCCTTTTTTTAGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTcc > 1:729768/1‑150 (MQ=255) cTTTCATTTGTTCCATGTTAACCACTTTTTCAGGGGTCCTTTTTTTAGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCAt > 1:414868/1‑150 (MQ=255) cTTTCATTTGTTCCATGTTAACCACTTTTTCAGGGGTCCTTTTTTTAGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGATACATCGCCGTCCAt < 2:1380714/150‑1 (MQ=255) tttCATTTGTTCCATGTTAACCACTTTTTCAGGGGTCCTTTTTTTAGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCAtt < 2:18770/150‑1 (MQ=255) ttCATTTGTTCCATGTTAACCACTTTTTCAGGGGTCCTTTTTTTAGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCAttt > 2:1685419/1‑150 (MQ=255) ttCATTTGTTCCATGTTAACCACTTTTTCAGGGGTCCTTTTTTTAGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGAGATGTATCATCGCCCTCCAttt > 1:853810/1‑150 (MQ=255) aTTTGTTCCATGTTAACCACTTTTTCAGGGGTCCTTTTTTTAGATTATCATTATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTc < 1:808568/150‑1 (MQ=255) tttGTTCCATGTTAACCACTTTTTCATGTGTCCTTTTTTTAGATTATCCTGATTATACACGCATAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTCCTGTCTTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCg < 1:219357/150‑1 (MQ=255) ttGTTCCATGTTAACCACTTTTTCAGGGTTCCTTTTTTTAGTTTATCCTGATTATAAACGAATAATCCATTTACGTAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGa < 1:746178/150‑1 (MQ=255) tGTTCCATGTTAACCACTTTTTCAGGGGTCCTTTTTTTAGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGAc < 2:1224315/150‑1 (MQ=255) tGTTCCATGTTAACCACTTTTTCAGGGGTCCTTTTTTTAGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGAc < 2:477003/150‑1 (MQ=255) gTTCCATGTTAACCACTTTTTCAGGGGTTCTTTTTTTAGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACa > 2:27418/1‑150 (MQ=255) ccATGTTAACCACTTTTTCAGGGGTCCTTTTTTTAGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGCCATAc > 2:959296/1‑150 (MQ=255) aTGTTAACCACTTTTTCAGGGGTCCTTTTTTTCGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTa < 1:138319/150‑1 (MQ=255) aTGTTAACCACTTTTTCAGGGGTCCTTTTTTTAGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTa < 1:1367154/150‑1 (MQ=255) tAACCACTTTTTCAGGGGTCCTTTTTTTAGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGAtt > 2:1606213/1‑150 (MQ=255) aaCCACTTTTTCAGGGGTCCTTTTTTTAGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTc > 2:1748671/1‑150 (MQ=255) aaCCACTTTTTCAGGGGTCCTTTTTTTAGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTc > 2:1592349/1‑150 (MQ=255) aCCACTTTTTCAGGGGTCCTTTTTTTAGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCg < 1:1558827/150‑1 (MQ=255) cACTTTTTCAGGGGTCCTTTTTTTAGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGtc < 2:1617006/150‑1 (MQ=255) cACTTTTTCAGGGGTCCTGTTTTTAGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGACTGCAAAAT‑ACTACTGTATTAAGGAGTAAATGGACGGCGATGTATCATCGCAGTCCATATTTCGACATACTAGATTCGtc > 2:8055/1‑150 (MQ=255) cTTTTTCAGGGGTCCTTTTTTTAGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTAT‑CAAAATAAGTCGTGTTTTCAGGATTAATTGGACGGCGATGTTGCATCTCAGTCCATTTTTGGCCATACTAGATTCGtctc > 2:76528/1‑150 (MQ=255) tttCAGGGGTCCTTTTTTTAGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGcc < 2:199113/150‑1 (MQ=255) ttCAGGGTTCCTTTTTTTAGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCt < 2:562670/150‑1 (MQ=255) tCAGGGGTCCTTTTTTTAGATTATCCTGATTATAAACGAAAAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTg > 2:1125938/1‑150 (MQ=255) aGGGGTCCTTTTTTTAGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGcc < 2:1624338/150‑1 (MQ=255) aGGGGTCCTTTTTTTAGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGcc < 2:1072668/150‑1 (MQ=255) tgggTCCTTTTTTTAGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCa < 1:240517/149‑1 (MQ=255) ggggTCCTTTTTTTAGATTATCCTGATTATAAACGAATAAT‑CATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAg > 2:1547258/1‑150 (MQ=255) gggTCCTTTTTTTAGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAg < 1:1834002/150‑1 (MQ=255) gggTCCTTTTTTTAGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAg < 2:663666/150‑1 (MQ=255) tCCTTTTTTTAGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGaaa > 2:1044152/1‑150 (MQ=255) tCCTTTTTTTAGATTATCCTGATTATAAACGAATAATCCATTTAAGGAATTTTTGTCTGCTAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCTTTTTTCGACATACTAGATTCGTCTCGCCTGCCAGaaa < 2:916857/150‑1 (MQ=255) cTTTTTTTAGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAAtt > 2:103539/1‑150 (MQ=255) tttttttAGAGTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAAttt > 1:1007841/1‑150 (MQ=255) ttAGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTg < 2:916334/150‑1 (MQ=255) ttAGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTg < 1:952126/150‑1 (MQ=255) aGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGcc < 2:918055/150‑1 (MQ=255) ccTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGAc < 1:453851/150‑1 (MQ=255) cTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACa < 1:20266/150‑1 (MQ=255) atGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACa < 2:1010012/149‑1 (MQ=255) tGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACAt < 2:452134/150‑1 (MQ=255) gATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACAtt < 2:356778/150‑1 (MQ=255) taAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCaa > 2:791787/1‑150 (MQ=255) aaaCGAATACTCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATTGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAg < 2:919051/150‑1 (MQ=255) aaaCGAATAATCCATTTACGGAATTTTTGTCTTCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAg < 1:425546/150‑1 (MQ=255) aaaCGAATAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGTTTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAg > 1:1729382/1‑150 (MQ=255) aaCGAATAATCCATTTACGGAATTTTTGTCTGTAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATAAAGt > 2:837129/1‑150 (MQ=255) aaCGAATAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGt > 2:1348632/1‑150 (MQ=255) aCGAATAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTg > 2:1089384/1‑150 (MQ=255) aCGAATAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTg < 1:1054835/150‑1 (MQ=255) aataatCCATTTACGGAATTTTTGTCTGAAAATT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGAgg < 1:358440/150‑1 (MQ=255) ccATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGAGGAACGCa < 1:1838748/150‑1 (MQ=255) cATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGACCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGAGGAACGCAt > 2:505755/1‑150 (MQ=255) aaTTTACGGAATTTTTGTCTGAAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGAGGAACGCAt < 1:1594699/149‑1 (MQ=255) aTTTACGGTATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCTCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGACAGAAATTTTTCTGCCAATAGACATTATCAAGTGAGGAACGCATc < 1:79977/150‑1 (MQ=255) tttACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGAGGAACGCATCa > 2:270271/1‑150 (MQ=255) ggAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCGAATAGACATTATCAAGTGAGGAACGCATCACTccc > 1:1003940/1‑150 (MQ=255) ggAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTAGTCTCGCCTGCCAGAAATTTTTCTGCCAATTGACATTATCAATTGATGAACGCATCaaaccc > 1:1834649/1‑145 (MQ=255) tGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGAGGAACGCATCACTCCCTTGCTGGt < 2:274116/150‑1 (MQ=255) gCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTTCCAATAGACATTATCAAGTGATGAACGCATCAATCCCTTGCTTGTAGAgg > 1:1677111/1‑150 (MQ=255) gCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGAGGAACGCATCACTCCCTTGCTTGTAGAgg > 2:215050/1‑150 (MQ=255) aaaT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGAGGAACGCATCACTCCCGTGCTGGTAGAGGCGt > 2:1430746/1‑150 (MQ=255) aaT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGAGGAACGCATCACTCCCTTGCTGGTAGAGGCGTg < 2:1418230/150‑1 (MQ=255) t‑actacTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGAGGAACGCATCACTCCCTTGCTGGTAGAGGCGTGGa > 2:405687/1‑150 (MQ=255) actactGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGAGGAACGCATCACTCCCTTGCTGGTAGAGGCGTGGAt < 1:103539/150‑1 (MQ=255) actGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGAGGAACGCATCACTCCCTTGCTGGTAGAGGCGTGGATaaa > 1:318052/1‑150 (MQ=255) actGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGAGGAACGCATCACTACCTTGCTGGTAGAGGCGTGGATaaa > 2:1425504/1‑150 (MQ=255) ctGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGAGGAATGCATCACTCCCTTGCTGGTAGAGGCGTGGATAAAt > 2:236257/1‑150 (MQ=255) tATTCAGGAGTATATGGACGGCGATGTTTCATCGCCGTCCATTTTTCGACATACTATATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGAGGAACGCATCACTCCCTTGCTGGTAGAGGCGTGGATAAATTgg < 2:567689/150‑1 (MQ=255) aTTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGAGGAACGCATCACTCCCTTGCTGGTAGAGGCGTGGATAAATTGgt < 1:570968/150‑1 (MQ=255) aTTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGAGGAACGCATCACTCCCTTGCTGGTAGAGGCGTGGATAAATTGgt < 2:1905561/150‑1 (MQ=255) tCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGAGGAACGCATCACTCCCTTGCTGGTAGAGGCGTGGATAAATTGgttg > 2:1325261/1‑150 (MQ=255) cAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGAGGAACGCATCACTCCCTTGCTGGTAGAGGCGTGGATAAATTGgttgt > 1:524115/1‑150 (MQ=255) aGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGAGGAACGCATCACTCCCTTGCTGGTAGAGGCGTGGATAAATTGgttgtt < 2:1871743/150‑1 (MQ=255) tAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGAGGAACGCATCACTCCCTTGCTGGTAGAGGCGTGGATAAATTGGTTGTTGGTAt > 2:728993/1‑150 (MQ=255) aaaTGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGAGGAACGCATCACTCCCTTGCTGGTAGAGGCGTGGATAAATTGGTTGTTGGTATc > 2:1000079/1‑150 (MQ=255) aaTGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGAGGAACGCATCACTCCCTTGCTGGTAGAGGCGTGGATAAATTGGTTGTTGTTATCg > 1:1680577/1‑150 (MQ=255) aaTGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGAGGAACGCATCACTCCCTTGCTGGTAGAGGCGTGGATAAATTGGTTGTTGGTATCg < 1:1125938/150‑1 (MQ=255) aTGGACGGCGATGATACATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGAGGAACGCATCACTCCCTTGCTGGTAGAGGCGTGGATAAATTGCTTGTTGGTATCGt > 1:1620910/1‑150 (MQ=255) tttaaggCGATTTATCATCGCCGTCCTTTTTTCGACATACTAGATTCTTCTCGCATGCAAGATTTTTTTCTGCAAATAGACATTTTCAAGGGAGGAACTCATCACTCCCTTGCTGGTAGAGGATTGTATAAATTGTTTGTTTGTATCTTa < 2:1148167/145‑1 (MQ=255) ggACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGAGGAACGCATCACTCCCTTGATGGTAGAGGCGTGGATAAATTGGTTGTTGGTATAGTaa > 2:1077290/1‑150 (MQ=255) aCGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGAGGAACGCATCACTCCCTTGCTGGTAGAGGCGTGGATAAATTGGTTGTTGGTATCGTAAAt < 1:209808/150‑1 (MQ=255) aCGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGAGGAACGCATCACTCCCTAGCTGGTAGAGGCGTGGATAAATTGGTTGTTGGTATCGTAAAt > 2:1520715/1‑150 (MQ=255) gCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGAGGAACGCATCACTCCCTTGCTGGTAGAGGCGTGGATAAATTGGTTGTTGGTATCGTAAATAcc > 2:1384910/1‑150 (MQ=255) gCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGAGGAACGCATCACTCCCTTGCTGGTAGAGGCGTGGATAAATTGGTTGTTGGTATCGTAAATAca > 1:614194/1‑149 (MQ=255) cGATGTCTCATCGCCGTCCATTTTTGGACATACTAGATTCGTCTCGCCTGCCTGAAATTTTTCTGGCAATAGACATTATCAAGGGAGGAACGGATCACTCCCTTGCTGGTAGAGGCGTGGATAAATTGGTTGTTGGTATCGTAAATACCt < 1:1239075/150‑1 (MQ=255) cGATGTATCATCGCCGTCCATTTTTCGACATACAAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGAGGAACGCATCACTCCCTTGCTGGTAGAGGCGTGGATAAATTGGTTGTTGGTATCGTAAATACCt < 1:473624/150‑1 (MQ=255) tGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGAGGAACGCATCACTCCCTTGCTGGTAGAGGCGTGGATAAATTGGTTGTTGGTATCGTAAATACCTACa > 2:1276260/1‑150 (MQ=255) | TACAGAAGGAGTAACTTTCATTTGTTCCATGTTAACCACTTTTTCAGGGGTCCTTTTTTTAGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAAT‑ACTACTGTATTCAGGAGTAAATGGACGGCGATGTATCATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGAGGAACGCATCACTCCCTTGCTGGTAGAGGCGTGGATAAATTGGTTGTTGGTATCGTAAATACCTACA > NC_000913/1792092‑1792387 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |