| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,830,060 | G→C | 8.2% | R236G (CGC→GGC) | astA ← | arginine succinyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,830,060 | 0 | G | C | 8.2% | 288.1 / 16.8 | 98 | R236G (CGC→GGC) | astA | arginine succinyltransferase |
| Reads supporting (aligned to +/- strand): ref base G (45/45); new base C (5/3); total (50/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.15e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.24e-01 | |||||||||||
Only 100 of 104 total aligned reads displayed.
GCCCTGCGCAGGCTGCCCTTCTGCCACTTCCACCAGCCGACTTTTACGGATGGCGCGCACGCGGTCGATGTCACACTCAAGCGTCGGCCCACCGTCAAAGATGTCGATATAGTTACGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGTTTGCGGATGTACCTGACCGATGACGTCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGATCGGATGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCGCAGAGAAAATCGGCGCGGCTAAAATCCA > NC_000913/1829911‑1830209 | gCCCTGCGCAGGCTGCCCTTCTGCCACTTCCACCAGCCGACTTTTACGGATGGCGCGCACGCGGTCGATGTCACACTCAAGCGTCGGCCCACCGTCAAAGATGTCGATATAGTTACGGTAGCGAAAACCTTCTTTCTCCAGCACcgcgcg > 1:1835413/1‑150 (MQ=255)gCCCTGCGCAGGCTGCCCTTCTGCCACTTCCACCAGCCGACTTTTACGGATGGCGCGCACGCGGTCGATGTCACACTCAAGCGTCGGCCCACCGTCAAAGATGTCGATATAGTTACGGTAGCGAAAACCTTCTTTCTCCAGCACcgcgcg > 1:4521/1‑150 (MQ=255) cTGCGCAGGCTGCCCTTCTGCCACTTCCACCAGCCGACTTTTACGGATGGTGCGCACGCGGTCGATGTCACACTCAAGCGTCGGCCCACCGTCAAAGATGTCGATATAGTTACGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGc < 1:1705738/150‑1 (MQ=255) cTGCGCAGGCTGCCCTTCTGCCACTTCCACCAGCCGACTTTTACGGATGGCGCGCACGCGGTCGATGTCACACTCAAGCGTCGGCCCACCGTCAAAGATGTCGATATAGTTACGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGc > 1:696575/1‑150 (MQ=255) gcgcAGGCTGCCCTTCTGCCACTTCCACCCGCCGACTTTTACGGATGGCGCGCACGCGGTCGATGTCACACTCAAGCGTCGGCCCACCGGCAAAGATGTCGATAGAGTTTCGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAg > 2:1202098/1‑150 (MQ=255) cAGGCTGCCCTTCTGCCACTTCCACCAGCCGACTTTTACGGATGGCGCGCACGCGGTCGATGTCACACTCAAGCGTCGGCCCACCGTCAAAGATGTCGATATAGTTACGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGgcg > 1:748300/1‑150 (MQ=255) acgCCCTTCTGCCACTTCCACCAGCCGACTTTTACGGATGGCGCGCACGCGGTCGATGTCACACTCAAGCGTCGGCCCACCGTCAAAGATGTCGATATAGTTACGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCggg > 2:1754129/3‑149 (MQ=255) ggCCCTTCTGCCACTTCCACCAGCCGACTTTTACGGATGGCGCGCACGCGGTCGATGTCACACTCAAGCGTCGGCCCACCGTCAAAGATGTCGATATAGTTACGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCCTGCCCGCGCGGtg < 1:1864856/149‑2 (MQ=255) gCCCTTCTGCCACTTCCACCCGCCGACTTTTACGGATGGCGCGCACGCGGTCGATGTCACACTCAAGCGTCGGCCCACCGTCAAAGATGTCGATATCGTTACGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGttt < 2:1380485/150‑1 (MQ=255) gCCCTTCTGCCACTTCCACCAGCCGACTTTTACGGATGGCGCGCACGCGGTCGATGTCACACTCAAGCGTCGGCCCACCGTCAAAGATGTCGATATAGTTACGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGttt < 1:248613/150‑1 (MQ=255) cccTTCTGCCACTTCCACCAGCCGACTTTTACGGATGGCGCGCACGCGGTCGATGTCACACTCAAGCGTCGGCCCACCGTCAAAGATGTCGATATAGTTACGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCCTGCCCGCGCGGtgct < 2:32436/150‑4 (MQ=255) ccTTCTGCCACTTCCACCAGCCGACTTTTACGGATTGCGCGCACGAGGTCGATGTCACACTCAAGCGTCGGCCCACCGGCAAAGATGTCGATATAGTTACGGTAGCGAAAACCTTCTTTCTCCCGCACCGCGAGGGCAGGCGCGGTTTGc < 2:1253201/150‑1 (MQ=255) ccTTCTGCCACTTCCACCAGCCGACTTTTACGGATGGCGCGCACGCGGTCGATGTCACACTCAAGCGTCGGCCCCCCGTCAAAGATGTCGATATAGTTACGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGTTTGc > 2:466025/1‑150 (MQ=255) cTTCTGCCACTTCCACCAGCCGACTTTTACGGATGGCGCGCCCGCGGTCGCTGTCACACTCAAGCGTCGGCCCACCGTCGAAGATGTCGCTATAGTTACGGTAGCGAAAACGTGCTTTCTCCAGCACACCGCGGGCAGGCGCGGGTTGCg > 1:1799409/1‑150 (MQ=255) cTTCTGCCACTTCCACCAGCCGACTTTTACGGATGGCGCGCACGCGGTCGATGTCACACTCAAGCGTCGGCCCACCGTCAAAGATGTCGATATAGTTACGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCCTGCCCGCGCGGtgctgg < 2:1879688/150‑6 (MQ=255) ttCTGCCACTTCCACCAGCCGACTTTTACGGATGGCGCGCACGCGGTCGATGTCACACTCAAGCGTCGGCCCACCGTCAAAGATGTCGATATAGTTACGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGTTTGCgg < 2:1854648/150‑1 (MQ=255) ttCTGCCACTTCCACCAGCCGACTTTTACGGATGGCGCGCACGCGGTCGATGTCACACTCAAGCGTCGGCCCACCGTCAAAGATGTCGATATAGTTACGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGTTTGCgg < 1:1324828/150‑1 (MQ=255) tCTGCCACTTCCACCAGCCGACTTTTACGGATGGCGCGCACGCGGTCGATGTCACACTCAAGCGTCGGCCCACCGTCAAAGATGTCGATATAGTTACGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGTTTGCGGa < 2:737946/150‑1 (MQ=255) tGCCACTTCCAGCAGCCGACTTTTACGGATGGCGCGCACGCGGTCGATGTCACACTCAAGCGTAGGGCCACCTTCAAAGATGTCGATATAGTTAAGGTAGCGAATACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGTTTGCGGATg < 2:123745/150‑1 (MQ=255) gCCACTTCCCCCAGCCGACTTTTACGGATGGCGCGCACGCGGTCGATGTCACACTCAAGCGTCGGCCCACCGTCAAAGATGTCGATATAGTTACGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGTTTGCGGATGt < 1:860062/150‑1 (MQ=255) gCCACTTCCACCAGCCGACTTTTACGGATGGCGCGCACGCGGTCGATGTCACACTCAAGCGTCGGCCCACCGTCAAAGATGTCGATATAGTTAGGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGTTTGCGGATGt > 1:956782/1‑150 (MQ=255) gCCACTTCCACCAGCCGACTTTTACGGATGGCGCGCACGCGGTCGATGTCACACTCAAGCGTCGGCCCACCGTCAAAGATGTCGATATAGTTACGGTAGCGAAAACCTTCTTTCTCCAGCGCCGCGCGGGCAGGCGCGGTTTGCGGATGt > 2:362338/1‑150 (MQ=255) gCCACTTCCACCAGCCGACTTTTACGGATGGCGCGCACGCGGTCGATGTCACACTCAAGCGTCGGCCCACCGTCAAAGATGTCGATATAGTTACGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGTTTGCGGATGt > 1:61871/1‑150 (MQ=255) ccACTTCCACCAGCCGACTTTTACGGATGGCGCGCACGCGGTCGATGTCACACTCAAGCGTCGGCCCACCGTCAAAGATGTCGATATAGTTACGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGAGCAGGCGCGGTTTGCGGATGTa > 2:1630812/1‑150 (MQ=255) aCTTCCACCAGCCGACTTTTACGGATGGCGCGCACGCGGTCGATGTCACACTCAAGCGTCGGCCCACCGTCAAAGATGTCGATATAGTTACGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGTTTGCGGATGTAcc < 2:1741135/150‑1 (MQ=255) aCTTCCACCAGCCGACTTTTACGGATGGCGCGCACGCGGTCGATGTCACACTCAAGCGTCGGCCCACCGTCAAAGATGGCGATATAGTTACGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGTTTGCGGATGTAcc < 2:1526032/150‑1 (MQ=255) tCCACCAGCCGACTTTTACGGATGGCGCGCACGCGGTCGATGTCACACTCAAGCGTCGGCCCACAGTCAAAGATGTCGATATAGTTACGGTAGCGAAAACCTTCTGTCTCCAGCACCGCGCGGGCAGGCGCGGGTTGCGGATGTACCTGa > 1:1540383/1‑150 (MQ=255) ccaccaGCCGACTTTTACGGATGGCGCGCACGCGGTCGATGTCACACTCAAGCGTCGGCCCACCGTCAAAGATGTCGATATAGTTACGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGTTTGCGGATGTACCTGAc < 2:65992/150‑1 (MQ=255) ccaccaGCCGACTTTTACGGATGGCGCGCACGCGGTCGATGTCACACTCAAGCGTCGGCCCACCGTCAAAGATGTCGATATAGTTACGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGTTGGCGGGTGTACCGGAc > 1:154599/1‑150 (MQ=255) tttACGGATGGCGCGCACGCGGTCGATGTCACACTCAAGCGTCGGCCCACCGTCAAAGATGTCGATATAGTTACGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGTTTGCGGATGTACCTGACCGATGACGTCCTg < 2:1116036/150‑1 (MQ=255) ttACGGATGGCGAGCAAGCGGTCGTTGTCACACTCAAGCGTCGGCCCACCGTCAAAGATGTCGATATAGTTACGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGTTTGCGGATGTACCTGACCGTTGACGTCCTgg < 2:1670751/150‑1 (MQ=255) cGGATGGCGCGCACGCGGTCGATGTCACACTCAAGCGTCGGCCCACCGTCAAAGATGTCGATATAGTTACGGTAGCGAAAACCTTCATTCTCCAGCACCGCGCGGGCAGGCGCGGTTTGCGGATGTACCTGACCGATGACGTCCTGGGCt > 2:1888646/1‑150 (MQ=255) aTGGCGCGCACGCGGTCGATGTCACACTCAAGCGTCGGCCCACCGTCAAAGATGTCGATATAGTTACGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGTTTGCGGAGGTACCTGACCGATGACGTCCTGGGCTTcc > 2:133380/1‑150 (MQ=255) tGGCGCGCACGCGGTCGATGTCACACTCAAGCGTCGGCCCACCGTCAAAGATGTCGATATAGTTACGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGTTTGCGGATGTTCCTGCCCGATGACGTCCTGGGCTTCCt > 2:1033860/1‑150 (MQ=255) gcgcgcACGCGGTCGATGTCACACTCAAGCGTCGGCCCACCGTCAAAGATGTCGATATAGTTACGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGTTTGCGGATGTACCTGACCGATGACGTCCTGGGCTTCCTgg < 2:1461256/150‑1 (MQ=255) cACGCGGTCGATGTCACACTCAAGCGTCGGCCCACCGTCAAAGATGTCGATATAGTTACGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGTTTGCGGATGTACCTGACCGATGCCGTCCTGGGCTTCCTGGGATaa > 1:709126/1‑150 (MQ=255) cgGTCGATGTCACACTCAAGCGTCGGCCCACCGTCAAAGATGTCGATATAGTTACGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGTTTGCGGAGGTACCTGACCGATGACGGCCTGGGCTTCCTGGGATTAAAAg > 1:245425/1‑150 (MQ=255) tCGATGTCACACTCAAGCGTCGGCCCACCGTCAAAGATGTCGATATAGTTACGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGTTTGCGGATGTACCTGACCGATGACGTCCTGGGCTTCCTGGGATAAAAAGTgg < 2:863848/150‑1 (MQ=255) gcGATGTCACACTCAAGCGTCGGCCCACCGTCAAAGATGTAGATATAGTTACGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGTTTGCGGATGTACCTGACCGATGACGTCCTGGGCTTCCTGGGATAAAAAGTgg < 2:1460885/149‑1 (MQ=255) cgctGTCACACTCAAGCGTCGGCCCACCGTCAAAGAAGTCGCTATAGTTACGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGTTTGCGGATGTACCTGACCGATGACGTCCTGGGCTTCCTGGGATAAAAAGTggg < 2:754958/147‑1 (MQ=255) cgctGTCACACGCAAGCGTCGGCCCACCGTCAAAGATGGCGATATAGGTTCGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGTTTGCGGAGGTACCTGACCGATGACGTCCTGGGCTTCCTGGGATAAAAAGTggg < 1:791986/147‑1 (MQ=255) cGATGTCACACTCAAGCGTCGGCCCACCTTCAAAGATGTCGATATAGATACGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGTTTGCGGATGTACCTGACCGATGACGTCCTGGGCTTCCTGGGATAAAAAGTggg > 2:1888749/1‑150 (MQ=255) cGATGTCACACTCAAGCGTCGGCCCACCGTCAAAGATGTCGATATAGTTACGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGTTTGCGGATGTACCTGACCGATGACGTCCTGGGCTTCCTGGGATAAAAAGTggg < 2:449534/150‑1 (MQ=255) gaagTCACACTCAAGCGTCGGCCCACCGTCAAAGATGTCGATATAGTTACGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGTTTGCGGATGTACCTGACCGATGACGTCCTGGGCTTCCTGGGATAAAAAGTGGGt < 1:1798681/147‑1 (MQ=255) gATCTCACACTCAAGCGTCGGCCCACCGTCAAAGAAGTCGATATAGTAACGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGTTTGCGGATGTACCTGACCGATGACGTCCTGGGCTTCCTGGGATAAAAAGTGGGt < 1:154045/150‑1 (MQ=255) tGTCACACTCATGCGTCGGCCCACCGTCAATGATGTCGATATAGTTAAGGTAGCGAAAACCTTCTTTCTCCAGCTCCGCGCGGGCAGGCGCGGTTTGCGGATGTACCTGACCGATGACGTCCTTGGCTTCCTGGGATAAAAAGTGGGtat < 2:1204267/150‑1 (MQ=255) tCACACTCAAGCGTCGGCCCACCGTCAAAGATGTCGATATAGTTACGGTAGCGAAACCCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGGTTGCGGATGTACCTGAACGATGCAGTCCTCGGCTTCCTGGGATAAAAAGGGGGTATAg > 2:361085/1‑150 (MQ=255) tCACACTCAAGCGTCGGCCCACCGTCAAAGATGTCGATATAGTTACGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGTTTGCGGATGTACCTGACCGATGACGTCCTGGGCTTCCTGGGATTAAAAGTGGGTATAg > 2:251738/1‑150 (MQ=255) tCACACTCAAGCGTCGGCCCACCGTCAAAGATGTCGATATAGTTACGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGTTTGCGGATGTACCTGACCGATGACGTCCTGGGCTTCCTGGGATAAAAAGTGGGTATAg > 2:1721682/1‑150 (MQ=255) cTCAAGCGTCGGCCCACCGTCAAAGATGTCGATATAGTTACGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGTTTGCGGATGTACCTGACCGATGACGTCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGATCgg > 1:438720/1‑150 (MQ=255) cTCAAGCGTCGGCCCACCGTCAAAGATGTCGATATAGTTACGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGTTTGCGGATGTACCTGACCGATGACGTCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGATCgg < 2:713415/150‑1 (MQ=255) cTCAAGCGTCGGCCCACCGTCAAAGATGTCGATATAGTTACGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGTTTGCGGATGTACCTGACCGATGACGTCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGATCgg < 1:235119/150‑1 (MQ=255) tCAAGCGTCGGCCCACCGTCAAAGATGTCGATATAGTTACGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGTTTGCGGATGTACCTGACCGATGACGTCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGATCGGa < 1:1355107/150‑1 (MQ=255) cAAGCGTCGGCCCACCGTCAAAGATGTCGATATAGTTACGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGTGTGCGGATGTACCTGACCGATGACGTCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGATCGGAt > 1:978995/1‑150 (MQ=255) aGCGTCGGCCCACCGTCAAAGATGTCGATATAGTTACGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGTTTGCGGATGTACCTGACCGATGACGTCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGATCGGATGt < 1:1490792/150‑1 (MQ=255) gTCGGCCCACCGTCAAAGATGTCGATATAGTTACGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGTTTGCGGATGTACCTGACCGATGACGTCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGATCGGATGTTTc > 1:725612/1‑150 (MQ=255) cGGCCCACCGTCAAAGATGTCGATATAGTTACGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGTTTGCGGATGTACCTGACCGATGACGTCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGATCGGATGTTTCgg < 1:4905/150‑1 (MQ=255) ggCCCACCGTCAAAGAGGTCGATTTAGATACGGGAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGTTTGCTGATGTACCTGACCAATGACGGCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGATCGGATGTTTCGGc < 2:1047368/150‑1 (MQ=255) gCCCACCGTCAAAGATGTCGATATAGTTACGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGTTTGCGGATGTACCTGACCGATGACGTCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGATCGGATGTTTCGGCa < 1:1474559/150‑1 (MQ=255) cccACCGTCAAAGATGTCGATATAGTTACGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGTTTGCGGATGTACCTGACCGATGACGTCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGATCGGATGTTTCGGCAt > 1:1528046/1‑150 (MQ=255) ccACCGTCATAGAGGTCGATATAGTTACGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGTTTGCGGATGTACCTGACCGATGACGTCCTTGGCTTCATGGGATAAAAAGTGGGTATATATCGGATGTTTCGGCATc < 1:322201/150‑1 (MQ=255) cACCGTCAAAGAGGTCGATATAGTTACGGTAGCGAAAACCTTCTTTCTCCAGCAACGCGCGGGCAGGCGCGGTTTGCGGATGTACCTGACCGATGACGTCCTGGGCTTCCTGGGATAAAAAGTGGTTATAGATCGGATGTATCGGCATCa > 2:1723487/1‑150 (MQ=255) tCAAAGATGTCGATATAGTTACGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGTTTGCGGATGTACCTGACCGATGACGTCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGATCGGATGTTTCGGCATCAGTTCt > 1:1322615/1‑150 (MQ=255) aaaGCTGTCGAATTAGTTACTGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGTTTGCGGATGTACCTGACCGATGACGTCCTGGGCTTCCTGGGATAAAACGTGGGTATAGATCGGATGTTTCGGCATCAGTTCTGc < 2:1752031/150‑1 (MQ=255) aaaGATGTCGATATAGTTACGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGTTTGCGGATGTACCTGACCGCTGACGTCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGATCGGATGTTTCGGCATCAGTTCTGc < 2:334528/150‑1 (MQ=255) aaaGATGTCGATATAGTTACGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGTTTGCGGATGTACCTGACCGATGACGTCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGATCGGATGTTTCGGCATCAGTTCTGc < 2:475122/150‑1 (MQ=255) aaaGATGTCGATATAGTGACGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGGAGGCGCGGTTTGCGGATTTACCTGACCGATGACGTCCTGGGCTTCCTGGGATAAATAGTGGGTATAGATCGGATGTTTCGGCATCAGTTCTGc < 2:681541/150‑1 (MQ=255) taGTTACGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGTTTGCGGATGTACCTGACCGATGACGTCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGATCGGATGTTTCGGCATCAGTTCTGCAATAAATGCCttt < 1:71771/150‑1 (MQ=255) gTTACGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGTTTGCGGATGTACCTGACCGATGACGTCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGATCGGATGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTg > 1:667963/1‑150 (MQ=255) ggTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGTTTGCGGATGTACCTGACCGATGACGTCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGAACGGATGTTTCGGCATCAGTTCTGCAATAAATGACTTTTGCCCgg > 1:594678/1‑150 (MQ=255) gCGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGTTTGCGGATGTACCTGACCGATGACGTCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGATCGGATGTTTCGGCATCAGTTCTGCCATAAATGCCTTTTGCCCGGTGcc > 1:1563483/1‑150 (MQ=255) gCGAAAACCTTCTTTCTCCAGCACCGCGAGGGCAGGCGCGGTTTGCGGATGTACCTGACCGATGACGTCCTGGGCTTCCTTGGATAAAAAGTGGGTATAGATAGGATGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTGCCAGGTGcc > 1:591074/1‑150 (MQ=255) cGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGTTTGCGGATGTACCTGACCGATGACGTCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGATCGGATGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTGCCCGGTGcag > 1:1434423/1‑148 (MQ=255) cGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGTTTGCGGATGTACCTGACCGATGACGTCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGATCGGATGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCg > 1:1442471/1‑150 (MQ=255) gAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGTTTGCGGATGTACCTGACCGATGACGTCCTGGGCTTCCTGGGATAAAGAGTGGGTATAGATCGGATGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCGc > 1:407889/1‑150 (MQ=255) ccTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGTTTGCGGATGTACCTGACCGATGACGTCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGATCGGATGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCGCAgaga > 1:1399775/1‑150 (MQ=255) tctttctCCAGCACCGCGCGGGCAGGCGCGGTTTGCGGATGTACCTGACCGATGACGTCGTGGGCTTCGTGGGATAAAAAGTGGGTATAGATCGGATGTTTCGTCATCAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCGCAGAGaaaa < 1:1327673/150‑1 (MQ=255) tctttctCCAGCACCGCGCGGGCAGGCGCGGTTTGCGGATGTACCTGACCGATGACGTCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGATCGGATGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCGCAGAGaaaa > 2:478522/1‑150 (MQ=255) tctttctCCAGCACCGCGCGGGCAGGCGCGGTTTGCGGATGTACCTGACCGATGACGTCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGATCAGATGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCGCAGAGaaaa > 2:1668327/1‑150 (MQ=255) tcatgctcCCGCCCCGGGCGTGCTTGTGCGGTTTTCGTTTTTAGCTGACGGTTGACGTCCTGGTCTTCGTGTGATAAAACGTGGGTATTGTTGGGATGTTTCGGCATCAGTTCTGCAATAACTGCCTTTTGCCCGGTGCCGCAGAGaaaa < 2:1040434/145‑1 (MQ=255) ttctCCAGCACCGCGCGGGCAGGCGCGGTTTGCGGATGTACCTGACCGATGACGTCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGATCGGATGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCGCAGAGAAAATCg > 1:168302/1‑150 (MQ=255) tctcCAGCACCGCGCGGGCAGGCGCGGTTTGCGGATGTACCTGACCGATGACGTCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGATCGGATGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCGCAGAGAAAATCgg < 1:703442/150‑1 (MQ=255) tcCAGCACCGCGCGGGCAGGCGCGGTTTGCGGATGTACCTGACCGATGACGTCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGATCGGATGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCGCAGAGAAAATCGgcg > 2:23171/1‑150 (MQ=255) tcCAGCACCGCGCGGGCAGGCGCGGTTTGCGGATGTACCTGACCGATGACGTCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGATCGGATGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCGCAGAGAAAATCGgcg > 2:438562/1‑150 (MQ=255) tcCAGCACCGCGCGGGCAGGCGCGGTTTGCGGATGTACCTGACCGATGACGTCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGATCGGATGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCGCAGAGAAAATCGgcg > 1:1653209/1‑150 (MQ=255) ccgcaaaCCGCGCCTGCCCGCGCGGTTTGCGGATGTACCTGACCGCTGACGTCCTGGGCGTCCTGGGATAAAAAGGGGGTTTAGAGCGGATGTTTCGGCATCAGTTCTGCAATAAATGCCTGTTGCCCGGTGCCGCAGAGAAAATCGgcg > 1:283132/7‑150 (MQ=255) cgcaaaCCGCGCCTGCCCGCGCGGTTTGCGGATGTACCTGACCGATGACGTCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGATCGGATGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCGCAGAGAAAATCGgcgc > 1:402921/6‑150 (MQ=255) ccAGCACCGCGCGGGCAGGCGCGGTTTGCGGATGTACCTGACCGATGACGTCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGATCGGATGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCGCAGAGAAAATCGgcgc > 1:692191/1‑150 (MQ=255) ccAGCACCGCGCGGGCAGGCGCGGTTTGCGGATGTACCTGACCGATGACGTCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGATCGGATGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCGCAGAGAAAATCGgcgc > 2:1084510/1‑150 (MQ=255) gcaaaCCGCGCCTGCCCGCGCGGTTTGCGGATGTACCTGACCGATGACGTCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGATCGGATGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCGCAGAGAAAATCGGcgcg > 2:1786093/5‑150 (MQ=255) gcgccGCGCGGGCAGGCGCGGGTTGCGGATGTACCTGACCGATGACGTCCTGGGCTTCCAGGGATAAAAAGTGGGGATAGATCGGATGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCGCAGAGAAAATCGGCGCGGc < 1:362338/147‑1 (MQ=255) gCACCGCGCGGGCAGGCGCGGTTTGCGGATGTTCCTGACCGATGACGTCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGATCGGAGGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCGCAGAGATAATCGGCGCGGc > 1:1679010/1‑150 (MQ=255) gCACCGCGCGGGCAGGCGCGGTTTGCGGATGTACCTGACCGATGACGTCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGATCGGATGTTTCGTCATCAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCGCAGAGAAAATCGGCGCGGc < 1:1196441/150‑1 (MQ=255) gCACCGCGCGGGCAGGCGCGGTTTGCGGATGTACCTGACCGATGACGGCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGATCGGATGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCGCAGAGAAAATCGGCGCGGc < 1:1557990/150‑1 (MQ=255) ccACCGCGCGGGCAGGCGCGGTTTGCGGATGTACCTGACCGATGACGTCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGATCGGATGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCGCAGAGAAAATCGGCGCGGc < 2:774332/149‑1 (MQ=255) aaaCCGCGCCTGCCCGCGCGGTTTGCGGATGTACCTGACCGATGACGTCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGATCGGATGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCGCAGAGAAAATCGGCGCGGc > 2:750126/3‑150 (MQ=255) cgcgcgGGCAGGCGCGGTTTGCGGATGTACCTGACCGATGACGTCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGATCGGATGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTGACCGGTGCCGCAGAGAAAATCGGCGCGGCTaaa > 2:477483/1‑150 (MQ=255) gggCAGGCGCGGTTTGCGGATGTACCTGACCGATGACGTCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGATCGGATGTTTCGGCATCAGTTCTGCAATTAATGCCTTTTGCCCGGTGCCGCAGAGAAAATCGGCGCGGCTAAAATCCa > 1:544033/1‑150 (MQ=255) gggCAGGCGCGGTTTGCGGATGTACCTGACCGATGACGTCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGATCGGATGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCGCAGAGAAAATCGGCGCGGCTAAAATCCa < 1:1022340/150‑1 (MQ=255) gggCAGGCGCGGATTGCGGATGTACCTGACCGATGACGTCATGGGCTTCCTGGGATAAAAAGTGGGTATAGATCGGATGTTTCGGCATCAGTTCTGCAATAACTGCCTTTTGCCCGGTGCCGCAGAGAAAATCGGCGCGGCTAAAATCCa < 2:301477/150‑1 (MQ=255) | GCCCTGCGCAGGCTGCCCTTCTGCCACTTCCACCAGCCGACTTTTACGGATGGCGCGCACGCGGTCGATGTCACACTCAAGCGTCGGCCCACCGTCAAAGATGTCGATATAGTTACGGTAGCGAAAACCTTCTTTCTCCAGCACCGCGCGGGCAGGCGCGGTTTGCGGATGTACCTGACCGATGACGTCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGATCGGATGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCGCAGAGAAAATCGGCGCGGCTAAAATCCA > NC_000913/1829911‑1830209 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |