| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,912,751 | C→A | 5.1% | intergenic (‑175/+17) | htpX ← / ← prc | putative endopeptidase/carboxy‑terminal protease for penicillin‑binding protein 3 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,912,751 | 0 | C | A | 5.1% | 395.3 / 7.6 | 135 | intergenic (‑175/+17) | htpX/prc | putative endopeptidase/carboxy‑terminal protease for penicillin‑binding protein 3 |
| Reads supporting (aligned to +/- strand): ref base C (60/67); new base A (5/3); total (65/70) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.81e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.38e-01 | |||||||||||
Only 100 of 135 total aligned reads displayed.
AAACGCAATATGCGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATCGAGTGCGATATTCACCGTCTCATCCAGATAAGGATCCGGCTCCTGGTAATCTTTCGGTAGATCATCCAGTTTCTT > NC_000913/1912603‑1912899 | aaaCGCAATATGCGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCt < 2:613962/150‑1 (MQ=255) gCAATATGCGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTtgtg > 1:1003061/1‑150 (MQ=255) gCAATATGCGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTtgtg < 2:1156248/150‑1 (MQ=255) gCAATATGCGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTtgtg < 1:1052486/150‑1 (MQ=255) cAATATGCGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATATACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGc < 2:726647/150‑1 (MQ=255) atatGCGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAAGAAATTGTGCCt < 2:680279/150‑1 (MQ=255) tGCGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAAGTTCTTGTGCCtgat > 1:1444730/1‑150 (MQ=255) tGCGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAAGAAATTGTGCCtgat < 2:844082/150‑1 (MQ=255) gCGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCtgatt < 2:508721/150‑1 (MQ=255) cGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCATGCACAATTTCTTGTGCCtgattg > 2:605453/1‑150 (MQ=255) gATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTATACATTTTGTAGCATCTGATTTACGGCATCTTGCCGCTGTT‑AAAAAATCAGGCACAAGAAATTGTGCCtgatttt < 1:81481/150‑3 (MQ=255) cccACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATAtt > 1:1063889/1‑150 (MQ=255) cccACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATAtt > 2:469735/1‑150 (MQ=255) cccACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCCCTGTT‑AAAAAATCAGGCACAATTTCTAGTGCCTGATTGATAtt > 2:1615230/1‑150 (MQ=255) ccACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTa > 1:549877/1‑150 (MQ=255) acaTCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACt < 1:1052725/150‑1 (MQ=255) cGTATGGGTTACGCGACTATTTTCAATTCTGGCTAGTGCGTAAGTCAGCAGAAAGACACAACTTTAATTTTTGTAGCATCTGATTTACGGCATGTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGAc < 2:315155/150‑1 (MQ=255) cGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGAc < 1:910816/150‑1 (MQ=255) cGTATGGGATACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGAc < 1:890777/150‑1 (MQ=255) tATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACgg > 1:800478/1‑150 (MQ=255) aCGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCATAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGgt < 1:1241334/150‑1 (MQ=255) aCGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGgt < 2:794246/150‑1 (MQ=255) aCTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACTGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTc < 1:1658217/150‑1 (MQ=255) cTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTcc > 2:843209/1‑150 (MQ=255) cTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGA‑TTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCATGATTGATATTACTTGACGGGAGCGGGTTGTTCcg > 2:338484/1‑150 (MQ=255) aTTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCcgc < 1:1805356/150‑1 (MQ=255) ttttCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACGTTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCcgcg > 1:1535266/1‑150 (MQ=255) ttCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCggg > 1:230992/1‑150 (MQ=255) ttCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCggg > 1:1601452/1‑150 (MQ=255) cAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTc > 1:1344164/1‑150 (MQ=255) aGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTg > 1:1208257/1‑150 (MQ=255) gTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTgg > 2:794938/1‑150 (MQ=255) ggATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCttt > 1:1003252/1‑150 (MQ=255) aGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCa > 1:304955/1‑150 (MQ=255) gTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCACGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCaa < 1:21910/150‑1 (MQ=255) tGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAg > 2:1900479/1‑150 (MQ=255) tGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAg < 1:162080/150‑1 (MQ=255) gTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGCCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCtt < 1:1019776/150‑1 (MQ=255) aGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGc < 1:666566/150‑1 (MQ=255) gTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTc < 2:516069/140‑1 (MQ=255) gTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTc > 1:516069/1‑140 (MQ=255) gTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGcc < 1:1277385/150‑1 (MQ=255) gTCACCAGAAAGACACAACTTTACATTATGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATAATACTTGACGGCAGCGGGATGTTCCGCGGGTCTGCCTTTTTCAAGCTTCGcc > 2:1212104/1‑150 (MQ=255) tCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCa < 2:544492/150‑1 (MQ=255) cAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATc > 2:1545667/1‑150 (MQ=255) aaGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATCGAGt > 1:978110/1‑150 (MQ=255) aGACACAACTTTACATTTTTTAGCATCTGAATTACTGCATCATGTCGCTGTT‑AAAATATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATCGAGTg < 1:1287199/150‑1 (MQ=255) aGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATCGAGTg < 1:1095456/150‑1 (MQ=255) aGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATCGAGTg < 1:1901661/150‑1 (MQ=255) gACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGATCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATCGAGTGc > 1:1687201/1‑150 (MQ=255) gACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATCGAGTGc > 1:596662/1‑150 (MQ=255) gACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTATTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATCGAGAGc > 2:1680906/1‑150 (MQ=255) cacacacCTATACATTTTGTACCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAACTCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTGGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATCGAGTGc < 2:74982/149‑1 (MQ=255) cacaACTTTACTTTTTTTATCATCTGATTTACGGCTTCTTGTCGCTGTT‑AAAACATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGGTGTTCCGCGGGTCTTGCTTTTTCAAGCTTCGCCAGATCTAGTGCgt < 1:1093784/150‑2 (MQ=255) cacaACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATCGAGTGCGa > 2:1460612/1‑150 (MQ=255) cacaACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATCGAGTGCGa > 1:1314909/1‑150 (MQ=255) caACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATCGAGTGCGata < 1:1619227/150‑1 (MQ=255) caACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATCGAGTGCGata > 2:1689859/1‑150 (MQ=255) aCTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATCGAGTGCGATAtt < 2:965571/150‑1 (MQ=255) cTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATCGAGTGCGATATTc < 2:794743/150‑1 (MQ=255) tttACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATCGAGTGCGATATTCa > 2:1640118/1‑150 (MQ=255) ttACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCAGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATCGAGTGCGATATTCAc > 1:263271/1‑150 (MQ=255) tACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATCGAGTGCGATATTCAcc < 2:1389168/150‑1 (MQ=255) aCATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATCGAGTGCGATATTCACCg < 2:1067248/150‑1 (MQ=255) ttttGTAGCATCTGATTTACGGCTTCTTGTCGCTGTT‑AAAAATTCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGTGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATCGAGTGCGATATTCACCGtct < 1:1026763/150‑1 (MQ=255) ttttGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATCGAGTGCGATATTCACCGtct < 2:1063889/150‑1 (MQ=255) aGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATCGAGTGCGATATTCACCGTCTCATCCa < 2:1003252/150‑1 (MQ=255) aTCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATCGAGTGCGATATTCACCGTCTCATCCAGAt < 2:196038/150‑1 (MQ=255) aTCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATCGAGTGCGATATTCACCGTCTCATCCAGAt > 1:1568256/1‑150 (MQ=255) tCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATCGAGTGCGATATTCACCGTCTCATCCAGATa > 2:753378/1‑150 (MQ=255) tGATTTACGGCATCTTGTCGCTGTTAAAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATCGAGTGCGATATTCACCGTCTCATCCAGATaa < 1:1401109/150‑1 (MQ=255) gATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATCGAGTGCGATATTCACCGTCTCATCCAGATAAgg > 1:602235/1‑150 (MQ=255) gATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATCGAGTGCGATATTCACCGTCTCATCCAGATAAgg > 2:393087/1‑150 (MQ=255) tttACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATCGAGTGCGATATTCACCGTCTCATCCAGATAAGGAt > 1:1366671/1‑150 (MQ=255) ttACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATCGAGTGCGATATTCACCGTCTCATCCAGATAAGGATc > 2:1105710/1‑150 (MQ=255) gCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATCGAGTGCGATATTCACCGTCTCATCCAGATAAGGATCCGGCt > 1:1846092/1‑150 (MQ=255) aTCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCGTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTTTTCCGCGGCTCTGGCTTTTTCAAGCTTCGCCAGAGCGCGTGCGATATTCACCGTCTCCTCCAGCTAAGGATCCGGCTcc > 1:234013/1‑150 (MQ=255) ttGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATCGAGTGCGATATTCACCGTCTCATCCAGATAAGGATCCGGCTCCTgg < 2:1649967/150‑1 (MQ=255) tGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATCGAGTGCGATATTCACCGTCTCATCCAGATAAGGATCCGGCTCCTGGt < 2:1003061/150‑1 (MQ=255) gCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATCGAGTGCGATATTCACCGTCTCATCCAGATAAGGATCCGGCTCCTGGTAAtg > 1:748139/1‑149 (MQ=255) tt‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATCGAGTGCGATATTCACCGTCTCATCCAGATAAGGATCCGGCTCCTGGTAATCTTTc < 2:1437747/150‑1 (MQ=255) t‑AAAAACTCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATCGAGTGCGATATTCACCGTCTCATCCAGATAAGGATCCGGCTCCTGGTAATCTTTCg < 1:1672187/150‑1 (MQ=255) t‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATCGAGTGCGATATTCACCGTCTCATCCAGATAAGGATCCGGCTCCTGGTAATCTTTCg < 1:518458/150‑1 (MQ=255) aaaaaaTCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATCGAGTGCGATATTCACCGTCTCATCCAGATAAGGATCCGGCTCCTGGTAATCTTTCgg < 2:800478/150‑1 (MQ=255) aaaaaaTCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATCGAGTGAGATATTCACCGTCTCATCCAGATAAGGATCCGGCTCCTGGTAATCTTTCgg > 1:1855394/1‑150 (MQ=255) ataaaTCTGGCACTATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATCGAGTGCGATATTCACCGTCTCATCCAGATAAGGATCCGGCTCCTGGTAATCTTTCGGt < 1:902980/148‑1 (MQ=255) aaTCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATCGAGTGCGATATTCACCGTCTCATCCAGATAAGGATCCGGCTCCTGGTAATCTTTCGGTAGa < 2:230992/150‑1 (MQ=255) aTCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGCCGGGAGCGGGTGGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATCGAGTGCGATATTCACCGTCTCATCCAGATAAGGATCCGGCTCCTGGTAATCTTTCGGTAGat < 1:142814/150‑1 (MQ=255) aTCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATCGAGTGCGATATTCACCGTCTCATCCAGATAAGGATCCGGCTCCTGGTAATCTTTCGGTAGat < 1:436423/150‑1 (MQ=255) aTCAGGCACAAGAAATTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATCGAGTGCGATATTCACCGTCTCATCCAGATAAGGATCCGGCTCCTGGTAATCTTTCGGTAGat > 2:41955/1‑150 (MQ=255) aTCAGGCACAAGAAATTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATCGAGTGCGATATTCACCGTCTCATCCAGATAAGGATCCGGCTCCTGGTAATCTTTCGGTAGat > 1:120636/1‑150 (MQ=255) tCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATCGAGTGCGATATTCACCGTCTCATCCAGATAAGGATCCGGCTCCTGGTAATCTTTCGGTAGatc < 2:1444730/150‑1 (MQ=255) tCAGGCACAATTTCTTGTGCCGGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATCGAGTGCGATATTCACCGTCTCGTCCAGATAAGGATCCGGCTCCTGGTAATCTTTCGGTAGatc < 2:1438259/150‑1 (MQ=255) cAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATCGAGTGCGATATTCACCGTCTCATCCAGATAAGGATCCGGCTCCTGGTAATCTTTCGGTAGatca < 1:831155/150‑1 (MQ=255) cacaATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATCGAGTGCGATATTCACCGTCTCATCCAGATAAGGATCCGGCTCCTGGTAATCTTTCGGTAGATCATCCa > 1:673483/1‑150 (MQ=255) aTTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATCTAGTGCGATATTCACCGTCTCATCCAGATAAGGATCCGGCTCCTGGTAATCTTTCGGTAGATCATCCAGttt > 1:222588/1‑150 (MQ=255) ttCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATCGAGTGCGATATTCACCGTCTCATCCAGATAAGGATCCGGCTCCTGGTAATCTTTCGGTAGATCATCCAGTttct < 2:1683198/150‑1 (MQ=255) ttCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATCGAGTGCGATATTCACCGTCTCATCCAGATAAGGATCCGGCTCCTGGTAATCTTTCGGTAGATCATCCAGTttct < 1:1900479/150‑1 (MQ=255) tCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATCGAGTGCGATATTCACCGTCTCATCCAGATAAGGATCCGGCTCCTGGTAATCTTTCGGTAGATCATCCAGTttctt < 1:1582906/150‑1 (MQ=255) tCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATCGAGTGCGATATTCACCGTCTCATCCAGATAAGGATCCGGCTCCTGGTAATCTTTCGGTAGATCATCCAGTttctt < 2:978110/150‑1 (MQ=255) | AAACGCAATATGCGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTT‑AAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTACTTGACGGGAGCGGGTTGTTCCGCGGGTCTGGCTTTTTCAAGCTTCGCCAGATCGAGTGCGATATTCACCGTCTCATCCAGATAAGGATCCGGCTCCTGGTAATCTTTCGGTAGATCATCCAGTTTCTT > NC_000913/1912603‑1912899 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |