| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,074,687 | T→G | 8.0% | intergenic (+29/‑92) | flu → / → yeeR | CP4‑44 prophage; antigen 43 (Ag43) phase‑variable biofilm formation autotransporter/CP4‑44 prophage; putative membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,074,687 | 0 | T | G | 8.0% | 246.3 / 2.1 | 120 | intergenic (+29/‑92) | flu/yeeR | CP4‑44 prophage; antigen 43 (Ag43) phase‑variable biofilm formation autotransporter/CP4‑44 prophage; putative membrane protein |
| Reads supporting (aligned to +/- strand): ref base T (54/52); new base G (7/5); total (61/59) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.64e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 127 total aligned reads displayed.
ACTGGAAGCCCGTGTCCGGGAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCAGGATTTGCCATTCTTCGCC > NC_000913/2074538‑2074836 | aCTGGAAGCCCGTGTCCGGGAAAATATCACCCTGGGCGTTCATGCCGGTTATGCACACAGAGTCAGCGTCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTTGTCCCGGt < 1:1852408/150‑1 (MQ=255)aCTGGAAGCCCGTGTCCGGGAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGt < 1:1545824/150‑1 (MQ=255)aCTGGAAGCCCGTGTCCGGGAAAATATCACCCTGGGCGTGCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGt < 1:708110/150‑1 (MQ=255) cTGGAAGCCCGTGTCCGGGAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGtc > 1:43819/1‑150 (MQ=255) gAAGCCCGTGTCCGGGAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGAAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGgcatc > 1:946187/1‑150 (MQ=255) ccGTGTCCGGGAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGCgcatcaaggc > 1:1580781/1‑146 (MQ=255) tgtCCGGGAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTTAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCgg < 1:495163/150‑1 (MQ=255) tgtCCGGGAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCgg < 1:1736988/150‑1 (MQ=255) tCCGGGTAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGa < 1:581706/150‑1 (MQ=255) ccGGGAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGAc < 2:1869178/150‑1 (MQ=255) ccGGGAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGGCATGATGACCGGGAc < 2:262812/150‑1 (MQ=255) cGGGAAAATATCACCCTGGGCGTGCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGAcc < 2:1240651/150‑1 (MQ=255) gggAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGGCAACATGCCCGGGcccc > 1:1761366/1‑150 (MQ=255) ggAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCg > 2:443001/1‑150 (MQ=255) atatCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCg > 1:1763422/1‑150 (MQ=255) tatCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATACTGACCGGGACCCCGACCgg > 1:1647743/1‑150 (MQ=255) aCCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGTCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCa > 2:1186338/1‑150 (MQ=255) aCCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCGGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCa > 2:1060736/1‑150 (MQ=255) cgggggGTTCCGGCGGTTTATGCCCACAGCGTCCGCGGCAGCAGCGCTGACGGGTAAAAGGGTCCGCCCACACTTAATGTGACCTTCTGACACAACCATCGCCTCTCTGTGGCCCCGGTCATCATGCCGGGGACCCGGACCGGCGCAACg < 2:709059/148‑1 (MQ=255) tGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCCCACTGAATGTGCCCTTCTGACAGCACCATCGCCTCTCTGTGGTCCCGGTCATCAAGACCGGGACCCCGCCCGGCGCAAccg > 1:750874/1‑148 (MQ=255) cGTTCCGGCCGGTTATGCCCACAGCGTCAGCGGAAGCAGCGCTGATGGGTATAACGGTCAGGCCACACTGAATGAGACCTTCTGACATAACCATCGCCTCTCTGCGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCt < 2:904847/150‑1 (MQ=255) cGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCt > 1:1302681/1‑150 (MQ=255) cAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTAATAATGACCGGGGCCCGGACCGGGGCAACGGGTCGTCac > 1:1566753/1‑149 (MQ=255) ggCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACg > 1:48860/1‑150 (MQ=255) cggtttATGCCCACAGCGTCAGCGGCAGCTGCGCTGATGGTTATAAGGGTCAGGCCACAGTTAATGTGACCTTCTGACACACCCATCGCCTCTCTGGGGTCCCGTTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGcc < 2:633350/146‑1 (MQ=255) ccGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCGTCAACGcc > 2:1582130/1‑150 (MQ=255) tATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGCCCGGCGCAACGGATCTTCAACGCCACAtt > 1:25178/1‑150 (MQ=255) tGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGCCCCGGACCGGCGCAACGGATCTTCAACGCCACATTCg > 2:1310836/1‑150 (MQ=255) tGCCCACAGCGTCAGCGGCAGCAGCGCGGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTCTGGTCCCGGTCATCATGACCGGGCCCCGGACCGGCGCAACGGATCTTCAACGCCAGATTCg > 1:1264218/1‑150 (MQ=255) gCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCCCATTCGc > 2:1822547/1‑150 (MQ=255) cccACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCt < 1:1066289/150‑1 (MQ=255) cccACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGGGAAAAATACCCGGACCCCGCCCCGCCCCACCGATATTAAACCCcacaataacg > 1:404713/1‑144 (MQ=255) ccACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTg < 1:1080105/150‑1 (MQ=255) acaGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGc < 1:1873823/150‑1 (MQ=255) acaGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGc < 1:1362441/150‑1 (MQ=255) acaGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCCGGCATCATGCCCGGGACCCCGACCGGCGCAACGGATCATCAACCCCCCCTTCCCTGGc > 2:201234/1‑150 (MQ=255) caGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGATTGTGACCTTCTGACAGACCCATCGCCGCTCTGTGGGCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCa < 2:407214/150‑1 (MQ=255) aGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCAt < 2:70580/150‑1 (MQ=255) gcAGCGGCAGCAGCGCTGAAGGTTAAAACGGTCTGGCCACACTGACTGTGACATTCTTACAGAACCATCGCCTCTCTGTGGTCCCGGTCTTCATGACCGGGACCCGGACCGGAGCAACGGATCTTCAACGCCACATTCGCTGGCATTAAc < 1:1145137/149‑1 (MQ=255) cAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGGCAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACa > 2:1801724/1‑150 (MQ=255) aGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGGCATCATGCCCGGGACCCGGCCCGGCGCCACGGCTCTTCACCGCCCCATTCGCTGGCATTAACaa > 1:552518/1‑150 (MQ=255) cGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCCGTCATAATGACCGGGCACCGGACCGGCCCCAAGGTTATTCAACCCCACAATCGCGTGCATTAaaaaaa > 2:1611010/1‑148 (MQ=255) gcagcGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATg > 1:1016685/1‑150 (MQ=255) cagcGCTGAACGGTATAACGGTCGGGCCACACTGAATGTTACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGTTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGa < 1:101755/150‑1 (MQ=255) gAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATtcat < 2:1251581/150‑1 (MQ=255) aaGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGCTCTTAAACGCCACATTAGCTGGCATTAACAATAAAATGATATtcata > 2:962344/1‑149 (MQ=255) aGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGCCCCGGACCGGCGCAACGGATCTTCAACGCCCCATTCGCTGGCATTAACAATAACATGATATtcatca > 2:158944/1‑150 (MQ=255) gggTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCCCATTCGCTGGCATTAACAATAACATGATATTAATAAc > 2:1518632/1‑150 (MQ=255) gTATAACGGTCTGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACgg < 2:569189/150‑1 (MQ=255) gTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGGCCCGGCCCGGCGCCACGGATCTTCAACGCCCCATTCGCGGGCATTAACAATAACATGATATTCATCACgg > 1:1891440/1‑150 (MQ=255) ataACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGGTGGCCTTAACAATAACATGATATTCATCACGGAg > 1:978100/1‑150 (MQ=255) taACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGt > 2:1660244/1‑150 (MQ=255) cAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATg < 2:545274/150‑1 (MQ=255) aGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGGCAGAATGGCCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACCTTCGCGGGCATGAACAATAACAAGATATTCAGCACGGCGTGCCTATGt > 1:355950/1‑150 (MQ=255) ggCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACGGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGtt < 2:1742729/150‑1 (MQ=255) gCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGCCCGGGCCCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAAAAACATGATATTCATCACGGAGTGACTATGTTa > 1:424376/1‑150 (MQ=255) caacacTTAATGGTACGTTCTGAAATAACCATCTCATCTCTGTGGTCCCGGTCTTAATGACCGGTACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTAc < 2:634668/148‑1 (MQ=255) cacaCTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACa < 1:276619/150‑1 (MQ=255) acacTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATTACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTAGCAGGCATTAACAATAACATGATATTAATAACGGAGTGACTATGTTACaa > 1:414592/1‑149 (MQ=255) cacTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGa < 2:43819/150‑1 (MQ=255) attgttACCTTCTGACAGAACAATCGCCTCTTTGTGGTCCCGGTAATCATGACCGGTACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTc < 1:1759190/148‑1 (MQ=255) tgtgACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCgg < 2:1016685/150‑1 (MQ=255) ttaCCTTCTCACAGAACCATCCGGTCTCTGTGTCCGCGGTCTTCATGCCCGGGACCCGGACGGGCGCAACGGATCTTCAACGTCACTTTCGCTTGCATTAACAATAACATGATATTCATCACGGAGTGACTATTTTACAGATAGTCGgcg < 2:148377/148‑1 (MQ=255) tgACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGCCCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATACCATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGgcg > 1:28781/1‑150 (MQ=255) gACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGCCCGGCGCAACGGATCTTCAACGCCACAATCGCTGGCATTAACAATTACATGATATTCATGACGGTGTGACGATGTTACAGATAGTCGgcgc > 2:678913/1‑150 (MQ=255) cactttCTGACAGAACCAGCGGCTCTCTGTGGGCCCTGCCTTCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTTACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGgcgc < 2:743541/146‑1 (MQ=255) aCCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGgcgcg < 2:853089/150‑1 (MQ=255) cTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCt < 2:1026442/150‑1 (MQ=255) gggaaacaaCCATCGGCTATCTGTGGTCCCGGACATCATGTCCGGGACCCGGTCCGGCGCAACGGATCTTCAACGCCACATTCGCTGCCATTCAGAATTTCATTATATTGATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGAt < 1:139472/143‑1 (MQ=255) cTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGAt < 2:1765268/150‑1 (MQ=255) tGACAGAACCATCGCCTCTCTGTGGACCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATc < 1:370083/150‑1 (MQ=255) gACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATcc < 1:1186338/150‑1 (MQ=255) gACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATcc > 2:1074748/1‑150 (MQ=255) aCAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCct < 1:443001/150‑1 (MQ=255) cAGAACCATCGCCTCTCTGTGGTCCCCGGCATCATGACCGGGCCCCCGACCCGCGCAACGGCACGTCAACGCCCCAATAGCAGGCAATAAAAATAACAAGATATTAAAAACGGAGTGACAATGTTAAAGAAAGTAGGCGGGCTTATActg > 2:1727296/1‑150 (MQ=255) gAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCctgct > 1:1061480/1‑150 (MQ=255) gAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCctgct < 2:1371269/150‑1 (MQ=255) caaCCTTCGCCGGTCTGGGTCCCCGGTAATCTTGCCCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCctgct < 2:1724155/149‑1 (MQ=255) cccATCGCCTCTCTTTGGTCCCGGTAATCATGACGGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGa < 1:681855/149‑1 (MQ=255) aCCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGa > 1:1304617/1‑150 (MQ=255) aCCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGa > 1:1163823/1‑150 (MQ=255) aCCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGa > 1:1311828/1‑150 (MQ=255) ccATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGGCCCGGGCCGGGGCAACGGATCATCAACGCCACATTCGCTGGCATTAGACATAACATGATATTAATACCGGTGTGACTATGTTGCATATAGTCGGCGCGCTGATCCGGCTGAt > 2:360857/1‑150 (MQ=255) ccATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGAt > 1:23673/1‑150 (MQ=255) ccATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCGTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGTGTGACTATGTTACAGATAGTCGGAGCGCTGATCctgcggct > 2:286849/1‑146 (MQ=255) ccATCGCCTCTCTGGGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGAt < 1:1696664/150‑1 (MQ=255) ccAGCGCCTCTCTGTGGTCCCGGTCATCAGCCCCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGAt < 1:1689076/150‑1 (MQ=255) aTCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCg < 2:1103426/150‑1 (MQ=255) aTCGCCTCTCTGTGGTCCCGGGCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGTCGCGCTGATCCTGCTGATCg < 2:946187/150‑1 (MQ=255) gCCTCTCTGTGGTCCCCGTCATAAATACCCGGGCCCCGACCGGCGCAACGGGTCTTGAACCCCCCATTGGCGGGCATTAACAATAACAATATATTAATCACGGAGTGACTATGTTTCAGAAAGTAGGCGCGCTGATCCATCAGATGGCAg > 2:391883/1‑150 (MQ=255) ccTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCAgg > 1:1123737/1‑150 (MQ=255) tctctGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCAGGAt > 2:1371671/1‑150 (MQ=255) ctGTGGTCCCGGTCATCATGACCGGGCCCCGGCCCGGCGCAACGGATCTTAAACGCCACATTCGCGGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTAAAGATAGTCGGCGCGCTGATCCTGCTGATCGCAGGATTTg > 2:1474268/1‑150 (MQ=255) tgGTCCGGGTATTCTTGACGGGTACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCAGGATTTGcct < 2:1605179/150‑2 (MQ=255) tgGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCAGGATTTGCCa > 1:521661/1‑150 (MQ=255) ggTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACTATAACATGATATTCATCACGGAGTGCCTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCAGGATTTGCCAt > 1:769540/1‑150 (MQ=255) gTCCCGGTCATGATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATTGTCGGCGCGCTGATCCTGCTGATCGCAGGATTTGCCAtt > 2:196397/1‑150 (MQ=255) cccGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATACTGCTGATCGCAGGATTTGCCTttct > 1:372085/1‑150 (MQ=255) cGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCAGGATTTGCCAttcttc < 2:414807/150‑1 (MQ=255) tcatcaTGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCAGGATTTGCCATTCTTCGcc < 1:1367292/150‑1 (MQ=255) | ACTGGAAGCCCGTGTCCGGGAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCAGGATTTGCCATTCTTCGCC > NC_000913/2074538‑2074836 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |