| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,859,832 | G→C | 5.1% | G25R (GGT→CGT) | pphB → | serine/threonine‑specific protein phosphatase 2 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,859,832 | 0 | G | C | 5.1% | 335.3 / 7.9 | 113 | G25R (GGT→CGT) | pphB | serine/threonine‑specific protein phosphatase 2 |
| Reads supporting (aligned to +/- strand): ref base G (48/59); new base C (4/2); total (52/61) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.11e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.55e-01 | |||||||||||
Only 100 of 119 total aligned reads displayed.
GGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTACAGGGTAAAACCATGCCATCTACACGCTATCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTGACGTCCTGCGCCTGCTAAACCAACCCTGGTTTACGTCGGTT > NC_000913/2859683‑2859981 | gggAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTACAGGGTAAAACCATGCCATCTACACGCTATCAAAAAATCAAAGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATg > 1:1640364/1‑150 (MQ=255)gggAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTACAGGGTAAAACCATGCCATCTACACGCTATCAAAAAAACAATCCCCAACAAAATCGCCATATATGGTTCGTTGGTGATATTCATg > 1:862522/1‑150 (MQ=255) ggAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTACAGGGTAAAACCATGCCATCTACACGCTATCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATgg > 1:722664/1‑150 (MQ=255) gAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATATGAAAGCTTATTTTACAGGGTAAAACCATGCCATCTACACGCTATCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGt < 2:720359/150‑1 (MQ=255) gAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTACAGGGTAAAACCATGCCATCTACACGCTATCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGt < 1:868498/150‑1 (MQ=255) atTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTACAGGGTAAAACCATGCCATCTACACGCTATCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAat > 2:1649644/1‑150 (MQ=255) atTAACGACAACTGACGAATAAAATAAAAACACACTGTATAATAGGAAAGCTTATTTTACAGGGTAAAACCATGCCATCTACACTCTATCAAAAAATCAATGCCCATCACTATCTCCATAAATAGGTCGTTGGTGATTTTCATCGTGAat > 1:156639/1‑150 (MQ=255) ttAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTACAGGGTAAAACCATGCCATCTACACGCTATCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAata < 1:341028/150‑1 (MQ=255) tAAAGACAAATGACTAATAAACTAAAAACAACCTGTATAATATGAAAGCTTATTATACATGGTAAAACCATGCCATCTACACGCTATCAAAAAATCACTGCACATCACTATCGCCAAATATGGGTCGTTGGTGATATTCATGGTGAatat < 1:299573/150‑1 (MQ=255) aaCGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTACAGGGTAAAACCATGCCATCTACACGCTATCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATc > 2:1302625/1‑150 (MQ=255) aaCGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTACAGGGTAAAACCATGCCATCTACACGCTATCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATc < 2:1121723/150‑1 (MQ=255) aCGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTACAGGGTAAAACCATGCCATCTACACGCTATCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCa > 2:1033253/1‑150 (MQ=255) cGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTACAGGGTAAAACCATGCCATCTACACGCTATCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCACCATGAATATCac < 2:1117380/150‑2 (MQ=255) gACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTACAGGGTAAAACCATGCCATCTACACGCTATCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCACCATGAATATCacc < 1:150688/150‑3 (MQ=255) cAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTACAGGGTAAAACCATGCCATCTACACGCTATCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGtta < 1:793422/150‑1 (MQ=255) aCTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTACAGGGTAAAACAATGCCATCTACACGCTATCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGttttt > 2:203350/1‑150 (MQ=255) gACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTACAGGGTAAAACCATGCCATCTACACGCTATCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGTTGATATTCATGGTGAATATCAGTTATTACa > 2:248069/1‑150 (MQ=255) taataaaataaAAACACCCTTTATAATAGGAAAGCTTATTTTACAGGGTAAAACCATGCCATCTACACGCTATCAAAAAATCAATGCCCATCACTATCGCCATATATGGGGCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATc < 2:301693/149‑1 (MQ=255) ataaaataaaAACACCCTGTATAATAGGAAAGCTTATTTTACAGGGTAAAACCATGCCATCTACACGCTATCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATccc < 2:109981/150‑1 (MQ=255) aaaaaataaaaACACCCTCTATAATAGTAAAGATTATTTTACAGGGTAAAACCATGCCATCTACACGCTATCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATccc < 2:1191243/148‑1 (MQ=255) taaaataaaaACACCCTGTATAATAGGAAAGCTTATTTTACAGGGTAAAACCATGCCATCTACACGCTATCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCg > 1:585012/1‑150 (MQ=255) taaaataaaaACACCCTGTATAATAGGAAAGCTTATTTTACAGGGTAAAACCATGCCATCTACACGCTATCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCg > 2:1172032/1‑150 (MQ=255) taaaataaaaACACCCTGTATAATAGGAAAGCTTATTTTACAGGGTAAAACCATGCCATCTACACGCTATCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCg < 2:1825509/150‑1 (MQ=255) aaaataaaaACACCCTGTATAATAGGAAAGCTTATTTTACAGGGTAAAACCATGCCATCTACACGCTATCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGc < 1:1884814/150‑1 (MQ=255) aaaataaaaACACCCTGTATAATAGGAAAGCTTATTTTACAGGGTAAAACCATGCCATCTACACGCTATCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGc < 1:1780703/150‑1 (MQ=255) aaataaaaACACCCTGTATAATAGGAAAGCTTATTTTACAGGGTAAAACCATGCCATCTACACGCTATCAAAAAATCAATGCCCATCACTATCTCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCt > 1:1135681/1‑150 (MQ=255) aataaaaACACCCTGTATAATAGGAAAGCTTATTTTACAGGGTAAAACCATGCCATCTACACGCTATCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCtt < 2:148062/150‑1 (MQ=255) taaaaACACCCTGTATAATAGGACAGCTTATTTTACAGGGTAAAACCATGCCATCTTCACGCTATCAAAACATCAATGCCCATCACTATCGCCATCTATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTAc < 1:142552/150‑1 (MQ=255) taaaaACACCCTGTATAATAGGAAAGCTTATTTTACAGGGTAAAACCATGCCATCTACACGCTTTCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCTTGGTGAATATCAGTTATTACAATCCCGCTTAc > 2:327147/1‑150 (MQ=255) aaaaaCACCCTGTATAATAGGAAAGCTTATTTTACAGGGTAAAACCATGCCATCTACACGCTATCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACa < 2:394826/150‑1 (MQ=255) aaaaCACCCTGTATAATAGGAAAGCTTATTTTACAGGGTAAAACCATGCCATCTACACGCTATCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACAt > 2:1583941/1‑150 (MQ=255) tGTATAATAGGAAAGCTTATTTTACAGGGTAAAACCATGCCATCTACACGCTATCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAActctct < 2:1639205/150‑1 (MQ=255) taataGGAAAGCTTATTTTACAGGGTAAAACCATGCCATCTACACGCTATCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCttttt < 1:1576635/150‑1 (MQ=255) tggAAAGCTTATTTTACAGGGTAAAACCATGGCATCTACACGCTATCAAAAAATCAATGCCCATCAATATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTccc < 2:649009/149‑1 (MQ=255) aGGCAAGCTTATTTTACAGGGTAAAGCCATGCCATCTACACGCTATCAAAAAATCAATGCCCATCACTATCGCCATATTTGGGTCGTTGGTGATATTCATGCTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCttttttaac > 2:1202674/1‑147 (MQ=255) ggAAAGCTTATTTTACAGGGTAAAACCATGCCATCTACACGCTATCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTcccc > 1:1555119/1‑150 (MQ=255) gAAAGCTTATTTTACAGGGTAAAACCATGCCATCTACACGCTATCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCa > 1:403410/1‑150 (MQ=255) ttATTTTACAGGGTAAAACCATGCCATCTACACGCTATCAAAAAATCAATGCCCATCACTATCGCAATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCg > 2:1608483/1‑150 (MQ=255) ttttACAGTGTAAAAGCATGCCATCTACACGCTATCAAAAAATCAATGCCGATCACTATCGCCATATATGGGTCGTTTGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGact < 1:1169719/150‑1 (MQ=255) ttttACAGGGTAAAACCATGCCATCTACACGCTATCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGact < 1:624735/150‑1 (MQ=255) aCAGGGTAAAACCATGCCATCTACACGCTATCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGacttact > 1:386967/1‑150 (MQ=255) cAGGGTAAAACCATGCCATCTACACGCTATCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGacttactt > 2:738831/1‑150 (MQ=255) cAGGGTAAAACCATGCCATCTACACGCTATCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGacttactt > 1:567055/1‑150 (MQ=255) ggTAAAACCATGCCATCTACACGCTATCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGACTTACTTAtt > 1:1511296/1‑150 (MQ=255) gTAAAACCATGCCATCTACACGCTATCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGACTTACTTAttt > 2:1020847/1‑150 (MQ=255) gTAAAACCATGCCATCAACACGCTATC‑AAATATCATTGCACATCAGTATCGCCATATATTTGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACTATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGACTTACTTATTTc < 2:722565/150‑1 (MQ=255) aaCCATGCCATCTACACGCTATCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGACTTACTTATTTCTGt < 1:1302625/150‑1 (MQ=255) aTGCCATCTACACGCTATCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGc < 1:149251/150‑1 (MQ=255) aTGCCATCTACACGCTATCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGc < 2:132895/150‑1 (MQ=255) gCCATCTACACGCTATCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGa < 2:1254874/150‑1 (MQ=255) ccATCTACACGCTATCAAAAAATCAATGCCCATCACTCTCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGat < 1:1036346/150‑1 (MQ=255) tCTACACGCTATCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGataat > 2:1019588/1‑150 (MQ=255) tCTACACGCTATCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATAGACTTACTTATTTCTGTCGGCGataat > 1:935946/1‑150 (MQ=255) acacGCCATCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATAtt > 1:790718/1‑150 (MQ=255) cccTATAAAAAAATCAATG‑CCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATc < 2:141878/148‑1 (MQ=255) cGCTATCAAAAAATCAATTACCATCACTAACGCCATATATGGGTCGTTGGTGATAATCATGGTCAAAAACAGATATTACAATCACCCTTACATCAACTCTCTTATTTCCCCAAAATCGACTTACTTATTTCTGTAGACGATAATATTGAt > 1:1165910/1‑150 (MQ=255) cGCTATCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGAt > 1:898043/1‑150 (MQ=255) gCTATCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTTAta > 1:57481/1‑149 (MQ=255) gCTATCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATc > 2:428584/1‑150 (MQ=255) gCTATCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATc > 2:597133/1‑150 (MQ=255) tCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTgg > 1:1127202/1‑150 (MQ=255) tCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTgg < 1:881929/150‑1 (MQ=255) tCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTgg < 1:126913/150‑1 (MQ=255) tCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTACCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATAGTgg > 1:1773671/1‑150 (MQ=255) cAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTAAATGAACTCTCTTTTTTCCGAAAAATCGACTTACTTATTTCTTTCTTCGATAATATTGATCGTGGa > 1:306884/1‑150 (MQ=255) aaaaataTCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGa < 1:1031385/149‑1 (MQ=255) aaaaaaaTCAATGCCCATCACTATCTCCATATATGTGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGa < 2:1182343/149‑1 (MQ=255) aaaaaTCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATAACAATAACGCTTACATCAACTCTCTTTTTTCCCCAAAATCGACTTACTTTTTTCTGTCGGCGATAATATTGATCGTGGAcc > 1:729203/1‑150 (MQ=255) aaaaTCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCg < 1:1033253/150‑1 (MQ=255) aaTCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGga < 1:1868695/150‑1 (MQ=255) tGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCt < 2:57951/150‑1 (MQ=255) cccATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTg < 1:1004617/150‑1 (MQ=255) cccATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTg < 1:1172032/150‑1 (MQ=255) cccATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCACAAAAAACGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTg > 2:1911407/1‑150 (MQ=255) cATCACTATCGCCATATATGGGGCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTGAc < 2:161472/150‑1 (MQ=255) aTCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTAATACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGACTTACTTATTACTGTCGGCGATAATATTGATCGTTGACCGGAGAGTCTTGAct > 1:1411426/1‑149 (MQ=255) cGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTGACGTCCTgcgc > 1:1850702/1‑150 (MQ=255) gCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGACTTAATTATATCTGTCGGCGAAAATATTGATCGAGGACCGGAGAGTCTTGACGTCCTGCGcc > 2:718202/1‑150 (MQ=255) cATATATGGGTCGTTGGTGATATTCATGGTGTATATCAGTTTTTACAATCCCGCTTACTTCAACTCTCTTTTTTGCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTGACGTCCTGCGCCTg < 2:1764208/150‑1 (MQ=255) atatatGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTGACGTCCTGCGCCTGc < 1:1322473/150‑1 (MQ=255) atatatGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTGACGTCCTGCGCCTGc < 1:1658409/150‑1 (MQ=255) tatatGGGTCGTTGGTGATATTCATGTTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTGACGTCCTGCGCCTGCt < 2:861486/150‑1 (MQ=255) atGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGCCTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTGACGTCCTGCGCCTGCTaaa > 2:1426487/1‑150 (MQ=255) tGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTGACGTCCTGCGCCTGCTAaac < 1:1614438/150‑1 (MQ=255) tGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTGACGTCCTGCGCCTGCTAaac < 1:690269/150‑1 (MQ=255) tGGGGCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTGACGTCCTGCGCCTGCTAaac < 2:348777/150‑1 (MQ=255) tCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTGACGTCCTGCGCCTGCTAaaccaac < 1:288699/150‑1 (MQ=255) ataactGATATTCACCATGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTGACGTACTGCGCCTGCTAAACCAAccc > 1:674868/6‑150 (MQ=255) actGATATTCACCATGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTGACGTCCTGCGCCTGCTAAACCAACCCTgg > 2:1480557/3‑150 (MQ=255) actGATATTCACCATGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGAGATAATATTGATCGTGGACCGGAGAGTCTTGACGTCCTGCGCCTGCTAAACCAACCCTgg > 1:1068107/3‑150 (MQ=255) gTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTGACGTCCTGCGCCTGCTAAACCAACCCTGGt > 2:1744764/1‑150 (MQ=255) gATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTACCCAAAATCGACTTAATTATTTCTGTCGGCGTTAATATTGATCGTGGACCGGAGAGTCTTGACGTCCTGCGCCTGCTAAACCAACCCTGGttt < 1:1012755/150‑1 (MQ=255) atatTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTGACGTCCTGCGCCTGCTAAACCAACCCTGGTTTa < 2:1682023/150‑1 (MQ=255) tatTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTGACGTCCTGCGCCTGCTAAACCAACCCTGGTTTAc > 2:391701/1‑150 (MQ=255) tCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTGACGTCCTGCGCCTGCTAAACCAACCCTGGTTTACGTc < 1:874031/150‑1 (MQ=255) cATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTGACGTCCTGCGCCTGCTAAACCAACCCTGGTTTACGTCg < 2:1119157/150‑1 (MQ=255) cATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTGACGTCCTGCGCCTGCTAAACCAACCCTGGTTTACGTCg < 1:1583941/150‑1 (MQ=255) cATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTGACGTCCTGCGCCTGCTAAACCAACCCTGGTTTACGTCg > 1:1487230/1‑150 (MQ=255) tGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTGACGTCCTGCGCCTGCTAAACCAACCCTGGTTTACGTCGGt > 2:44645/1‑150 (MQ=255) ggTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTGATTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTCATCGTGGACCGGAGAGTCTTGACTTCCTGCGCCAGCTAAACCAACCCTGGATAACGTCGGtt > 2:1310762/1‑150 (MQ=255) | GGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTACAGGGTAAAACCATGCCATCTACACGCTATCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTGACGTCCTGCGCCTGCTAAACCAACCCTGGTTTACGTCGGTT > NC_000913/2859683‑2859981 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |