Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,491,705 A→C 6.7% intergenic (‑85/+20) yhfG ← / ← ppiA putative antitoxin for Fic/peptidyl‑prolyl cis‑trans isomerase A (rotamase A)

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,491,7050AC 6.7% 255.5 / 6.6 94intergenic (‑85/+20)yhfG/ppiAputative antitoxin for Fic/peptidyl‑prolyl cis‑trans isomerase A (rotamase A)
Reads supporting (aligned to +/- strand):  ref base A (24/62);  new base C (4/3);  total (28/66)
Fisher's exact test for biased strand distribution p-value = 1.92e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.96e-01

TGAAAATTACGATTACGCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGCCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGCAAGATTGCCCGCGCGAGAAATCATTACGGCAGGACTTTAGCGGAAAGGATAACTACCGGTTTTGACGGCACATTCTGGTACGGACCAACGTCATGAGTCGGCACCTGGGAAATCTTATCGGCAACGTCCATGCCTTTCACCACTTTACCAA  >  NC_000913/3491556‑3491852
                                                                                                                                                      |                                                                                                                                                   
tGAAAATTACGATTACGCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGCCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGCAAGa                                                                                                                                                     >  1:110047/1‑150 (MQ=255)
 gAAAATTACGCTTACGCGGTAGCTCCGAGAGAGGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGCCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGCAAGAt                                                                                                                                                    <  1:269792/150‑1 (MQ=255)
 gAAAATTACGATTACGCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGCCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCTGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGGAAGAt                                                                                                                                                    >  1:905315/1‑150 (MQ=255)
   aaaTTACGATTACGCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGCCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGCAAGATTg                                                                                                                                                  <  1:2899/150‑1 (MQ=255)
   aaaTTACGATTACGCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGCCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGCAAGATTg                                                                                                                                                  <  2:216113/150‑1 (MQ=255)
    aaTTACGATTACGCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGCCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGCAAGATTGc                                                                                                                                                 >  2:221406/1‑150 (MQ=255)
      ttacgattacgCTGAAGCTCCCAGAGACGGAACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGCCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGCAAGATTGccc                                                                                                                                               <  2:1623213/150‑1 (MQ=255)
       tacgattacgCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGCCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGCAAGATTGCCcg                                                                                                                                              >  1:314579/1‑150 (MQ=255)
         cgattacgCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGCCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCGCCGGGAAAAATTcccccc                                                                                                                                             >  2:1660665/1‑148 (MQ=255)
         cgattacgCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGCCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGCAATCTTGCCcgcg                                                                                                                                            <  1:378250/150‑1 (MQ=255)
         cgattacgCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTACACTTGATGCCTCCCTGAACGTCTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGCAAGATTGCCcgcg                                                                                                                                            >  1:1300576/1‑150 (MQ=255)
         cgattacgCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGATTCTTCACTTGATGCCTCCCTGAACGTGTCCATTTTCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGCAATCTTGCCcgcg                                                                                                                                            <  2:1104574/150‑1 (MQ=255)
           attacgCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGCCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCT‑CGGGCAATCTTGCCcgcgct                                                                                                                                          <  1:1037094/150‑2 (MQ=255)
           attacgCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGCCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGCAAGATTGCCcgcgcg                                                                                                                                          <  2:228941/150‑1 (MQ=255)
             tacgCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGCCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGCAAGATTGCCCGCGCgag                                                                                                                                        <  2:429793/150‑1 (MQ=255)
             accgCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGCCTCCCTGAACGTGTCCATTTGCCCCAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGCAAGATTGCCCGCGCgag                                                                                                                                        <  1:1776276/148‑1 (MQ=255)
              acgCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGGGAGTGGCTTCACTGGATGCCTCCCTTACCGTGCCCATTTCCCCCAATTATAAGCGGCAAATCCGGGTAACGCCGGGAGAGCATAAGCG‑CGGGCAAGATTGCCCGCGCgaga                                                                                                                                       <  1:1703665/150‑1 (MQ=255)
                  tGAAGCTCCCAGACCCGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGCCTCCCTGAACGTGTCCATTTCCCACAAGTATAATCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGCAAGATTGCCCGCGCGAGAAATc                                                                                                                                   <  1:496036/150‑1 (MQ=255)
                  ccaaGCTCCCAGAGACGGGACTTTTGCAAATCGGTGAGTTTCTTCACTTGATGCCTCCCTGAACGTGTCCATATGCCCCAAGAATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGCAAGATTGCCCGCGCGAGAAATc                                                                                                                                   <  1:1898870/148‑1 (MQ=255)
                   gAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGCCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGCAAGATTGCCCGCGCGAGAAATCa                                                                                                                                  <  2:20444/150‑1 (MQ=255)
                   gAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGCCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGCAAGATTGCCCGCGCGAGAAATCa                                                                                                                                  <  1:1024200/150‑1 (MQ=255)
                   gAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGCCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATACGGGTTACGCGGGGAGATCAGAAGCG‑CGTTCAAGCTTGCCCGCGCGATAACTCa                                                                                                                                  >  2:278604/1‑150 (MQ=255)
                    atgcgcccAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGCCTCCCTGAACGTGACCATTTGCCACAATTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGCAAGATTGCCCGCGCGAGAAATCAt                                                                                                                                 <  1:922388/145‑1 (MQ=255)
                    aaGCTCCCAGAGCCGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTTATGCCTCCCTGAACGTGCCCATTTGCCACAAGAATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGCAAGATTGCCCGCGCGAGAAATCAt                                                                                                                                 <  1:1592048/150‑1 (MQ=255)
                     aGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGCCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGCAAGATTGCCCGCGCGAGAAATCAtt                                                                                                                                <  2:529839/150‑1 (MQ=255)
                     aGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGCCTCCCTGAACGTGGCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTGACGCCGGGAGAGCAGAAGCG‑CGGGCAAGACTGCCCGCGCGAGAAATCAtt                                                                                                                                <  1:1540235/150‑1 (MQ=255)
                            agagACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGCCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGCAAAATTTCCCGCGCGAGAAATAATTACGGCAg                                                                                                                         >  1:12542/1‑150 (MQ=255)
                                   ggACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGCCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGCGAGATTTACCGCGGCAGCAATCATTTCGGCgggccgttt                                                                                                                  >  1:907583/1‑144 (MQ=255)
                                    gACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGCCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGCAAGATTGCCCGCGCGAGAAATCATTACGGCAGGACTTTAg                                                                                                                 <  1:1847590/150‑1 (MQ=255)
                                    gACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGCCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGCAAGATTGCCCGCGCGAGAAATCATTACGGCAGGACTTTAg                                                                                                                 <  1:473583/150‑1 (MQ=255)
                                       ttttGCTTATCGGTGAGTTTCTTCACTTGATGCCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGCAAGATTGCCCGCGCGAGAAATCATTACGGCAGGACTTTAGCgg                                                                                                              <  2:1647129/150‑1 (MQ=255)
                                           gCTTATCGGTGTGTTTATACTCTTGATGCCTCCCTGAACGTTTCCATTTGCCACATCTCTAAGCGGCTAATCCGGGTTACGCAGGGAGAGCAGAAGCG‑CGGGCAAGTTTGCCCGCGCGAGAAATCATTACGGCAGTACTTTAGCGGAAAg                                                                                                          <  2:1388411/150‑1 (MQ=255)
                                           gCTTATCGGTGAGTTTCTTCACTTGATGCCTCCCTGAACGTGTCCATTTGCCACAAGTATAATCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGCAAGATTGCCCGCGCGAGAAATCATTACGGCAGGACTTTAGCGGAAAg                                                                                                          <  2:1550876/150‑1 (MQ=255)
                                           gCTTATCGGTGAGTTTCTTCACTTGATGCCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGCAAGATTGCCCGCGCGAGAAATCATTACGGCAGGACTTTAGCGGAAAg                                                                                                          <  1:1524231/150‑1 (MQ=255)
                                            cTTATCGGTGAGGTTCTTCACTTGATGCCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGACGCG‑CGGGCAAGATTGCCCGCGCGAGAAATCATTACGGCAGGACTTTAGCGGAAAgg                                                                                                         <  1:227973/150‑1 (MQ=255)
                                             ttATCGGTGAGTTTCTTCACTTGATGCCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGCAAGATTGCCCGCGCGAGAAATCATTACGGCAGGACTTTAGCGGAAAGGa                                                                                                        <  2:1579494/150‑1 (MQ=255)
                                             ttATCGGTGAGTTTCTTCACTTGATGCCTCCCTGAACGTGTCCATTTACCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGCAAGATTGCCCGCGCGAGAAATCATTACGGCAGGACTTTAGCGGAAAGGa                                                                                                        >  2:1368098/1‑150 (MQ=255)
                                              tATCGGTGAGTTTCTTCACTTGCTGCCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGCTTACGCCGGGAGAGCAGAAGCG‑CGGGCAAGATTGCCCGCCCGAGAAATCATTACCGCCGGACTTTTGCGGAAAGGaa                                                                                                       >  2:991956/1‑149 (MQ=255)
                                              tATCGGTGAGTTTCTTCACTTGATGCCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCG‑CCGGCAAGCATGGCCGCCCGGCAAATAATTAATGGCGGCCTTTAGGGGAAAgggt                                                                                                       >  1:1867058/1‑148 (MQ=255)
                                                 gggTGAGTTTCTTCACTTGATGCCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGCAAGATTGCCCGCGCGAGAAATCATTACGGCAGGACTTTAGCGGAAAGGATAAc                                                                                                    <  2:1601288/149‑1 (MQ=255)
                                                 cGGTGAGTTTCTTCACTTGATGCCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGCAAGATTGCCCGCGCGAGAAATCATTACGGCAGGACTTTAGCGGAAAGGATAAc                                                                                                    <  1:605403/150‑1 (MQ=255)
                                                 cGGTGAGTTTCTTCACTTGATGCCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGCAAGATTGCCCGCGCGAGAAATCATTACGGCAGGACTTTAGCGGAAAGGATAAc                                                                                                    <  2:1342982/150‑1 (MQ=255)
                                                     gAGTTTCTTCACTTGATGCCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGCAAGATTGCCCGCGGGAGAAATCATTACGGCAGGACGTTTGCGGAAAGGATAACGAcc                                                                                                >  2:94801/1‑150 (MQ=255)
                                                      aGTTTCTTCACTTGATGCCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGCAAGATTGCCCGCGCGAGAAATCATTACGGCAGGACTTTAGCGGAAAGGATAACTACCg                                                                                               <  2:486727/150‑1 (MQ=255)
                                                       gTTTCTTCACTTGATGCCTCCCTGAACGTGTCCATATGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGCAGCG‑CGGGCAAGATTGCCCGCGCGAGAAATCAATACGGCAGGACTTTAGCGGAAAGGATAACTGCCgg                                                                                              >  1:1222643/1‑150 (MQ=255)
                                                         ttcttcACTTGATGCCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGCAAGATTGCCCGCGCGAGAAATCATTACGGCAGGACTTTAGCGGAAAGGATAACTACCGGtt                                                                                            <  1:1076601/150‑1 (MQ=255)
                                                           cttcACTTGATGCCGCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGCAAGATTGCCCGCGCGAGAAATCATTACGGCAGGACTTTAGCGGAAAGGATAACTACCGGtttt                                                                                          <  1:602319/150‑1 (MQ=255)
                                                              cACTTGATGCCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGCAAGATTGCCCGCGCGAGAAATCAATACGGCAGGACTTTAGCGGAAAGGAAAACTACCGGTTTTGAc                                                                                       >  2:14398/1‑150 (MQ=255)
                                                                  tGATGCCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGCAAGATTGCCCGCGCGAGAAATCATTACGGCAGGACTTTAGCGGAAAGGATAACTACCGGTTTTGACGGca                                                                                   <  2:314579/150‑1 (MQ=255)
                                                                  tGAAGCCTCCCTTAACGTGCCCATTTGCCACAAGTATCAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGCAAGATTGCCCGCGCGAGAAATCATTACGGCAGGACTTTAGCGGAAAGGATAACTACCGGTTTTGACGGca                                                                                   <  2:1143318/150‑1 (MQ=255)
                                                                          cccTGAACGTGTCCTTGTGCCTCAAGTCTAAGCGGCAAATCCTGGTTACGCCGGGAGAGCAGAAGCG‑CTGGCAAGATTGCCCGCGCGAGAATTCATTAAGGCAGGACTTTAGCGTAAAGGATAACTACCGGTTTTGACGGCACATTCTgg                                                                           <  1:1176467/150‑1 (MQ=255)
                                                                          cccTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCG‑CTGGCAAGATTGCCCGCGCGAGAAATCATTACGGCAGGACTTTAGCGGAAAGGATAACTACCGGTTTTGACGGCACATTCTgg                                                                           <  1:1175320/150‑1 (MQ=255)
                                                                          cccTGAACGTGGCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGCAAGATTGCCCGCGCGAGAAATCATTACGGCAGGACTTTAGCGGAAAGGATAACTACCGGTTTTGACGGCACATTCTgg                                                                           <  2:877065/150‑1 (MQ=255)
                                                                          cccTGAACGGGGCCATTTGCCACCAGTATAAGCGGCAAATCCGGGCTACGCCGGGAGAGCAGAAGCG‑CGGGCAAGATTGCCCGCGCGAGAAATCATTACGGCAGGACTTTAGCGGACAGGATAACTACCGGTTTTGACGGCACATTCTgg                                                                           <  1:519440/150‑1 (MQ=255)
                                                                              caaCGTGTCCAATTGCCACAAGTAAAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGCAAGATTGCCCGCGCGAGAAATCATTACGGCAGGACTTTAGCGGAAAGGATAACTACCGGTTTTGACGGCACATTCTGGTACg                                                                       <  2:1670556/149‑1 (MQ=255)
                                                                                aCGTGTCCATTTGCCACAAGTATAAGCGGCAACTCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGCAAGATTGCCCGCGCGAGAAATCATTACGGCAGGACTTTAGCGGAAAGGATAACTACCGGTTTTGACGGCACATTCTGGTACGGa                                                                     <  2:86706/150‑1 (MQ=255)
                                                                                   tgtCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGCAAGATTTGACGCGCGACAAAAAAATTATGCAGGTCATTATGGGAGACGATAACAACCCGGTTTGACGGCCCCTTGAGGTACgggacc                                                                  >  2:924721/1‑146 (MQ=255)
                                                                                   tgtCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGCAAGATTGCCCGCGCGAGAAATCATTACGGCAGGACTTTAGCGGAAAGGATAACTACCGGTTTTGACGGCACATTCTGGTACGGACCa                                                                  >  1:1359855/1‑150 (MQ=255)
                                                                                          ttGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGCAAGATTGCCCGCGCGAGAAATCATTACGGCAGGACTTTAGCGGAAAGGATAACTACCGGTTTTGACGGCACATTCTGGTACGGACCAACGTCAt                                                           <  2:845286/150‑1 (MQ=255)
                                                                                            gCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGCCAGATTTCCCGCGCGAGAAAACATTACGGCAGGTCATTAGCGGAAAGGATAACTACCGGTTTTGACGGCACATTCTGGTACGGACCAACGTCATGa                                                         >  1:1258614/1‑150 (MQ=255)
                                                                                             ccACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGCAAGATTGCCCGCGCGAGAAATCATTACGGCAGGACTTTAGCGGAAAGGATAAGTACCGGTTTTGACGGCACATTCTGGTACGGACCAACGTCATGAg                                                        <  2:104893/150‑1 (MQ=255)
                                                                                              cacaAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGCAAGATTGCCCGCGCGAGAAATCATTACGGCAGGACTTTAGCGGAAAGGATAACTACCGGGTTTGACGGCACATTCTGGTACGGACCAACGTCATGAGt                                                       <  2:389697/150‑1 (MQ=255)
                                                                                                 caGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGCAAGATTGCCCGCGCGAGAAATCATTACGGCAGGACTTTAGCGGAAAGGATAACTACCGGTTGTGACGGCACATTCTGGTACGGACCAACGTCATGAGTCgg                                                    <  1:1406631/149‑1 (MQ=255)
                                                                                                  aGTATAAGCGTCAAATCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGTGCAAGATTGCCCGCGCGAGAAATCATTACGTCAGGACTTTAGCGGAAAGGATAACTACCGGTTTTGACGGCACATTCTGGTACGGACCAACGTCATGAGTCGGc                                                   <  2:1338989/150‑1 (MQ=255)
                                                                                                       aaGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGCAAGATTGCCCGCGCGAGAAATCATTACGGCAGGACTTTAGCGGAAAGGATAACTACCGGTTTTGACGGCACATTCTGGTACGGACCAACGTCATGAGTCGGCACCTg                                              <  2:220315/150‑1 (MQ=255)
                                                                                                              aaaTCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGCAAGATTGCCCGCGCGATAAATCATTACGGCAGGACTTTAGCGGAAAGGATAACTACCGGTTTTGACGGCACATTCTGGTACGGACCAACGTCATGAGTCGGCACCTGGGAAATc                                       <  2:1005198/150‑1 (MQ=255)
                                                                                                               aaTCCGGGTTACGCCGGGAGCGCAGAAGCG‑CGGGCAAGATTGCCCGCGCGAGAAATCATTACGGCAGGACTTTAGCGGAAAGGATAACTACCGGTTTTGACGGCACATTCTGGTACGGACCAACGTCATGAGTCGGCACCTGGGAAATCt                                      <  1:377545/150‑1 (MQ=255)
                                                                                                               aaTCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGCAAGATTGCCCGCGCGAGAAATCATTACGGCAGGACTTTAGCGGAAAGGATAACTACCGGTTTTGACGGCACATTCTGGTACGGACCAACGTCATGAGTCGGCACCTGGGAAATCt                                      <  2:1106262/150‑1 (MQ=255)
                                                                                                                   cGGGTTACGCCTGGAGAGCAGAAGCG‑CGGGCAAGATTGCCCGCGCGAGAAATCATTACGGCAGGACTTTAGCGGAAAGGATAACTACCGGTTTTGACGGCACATTCTGGTACGGACCAACGTCATGAGTCGGCACCTGGGAAATCTTATc                                  <  2:980923/150‑1 (MQ=255)
                                                                                                                   cGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGCAAGATTGCCCGCGCGAGAAATCATTACGGCAGGACTTTAGCGGAAAGGATAACTACCGGTTTTGACGGCACATTCTGGTACGGACCAACGTCATGAGTCGGCACCTGGGAAATCTTATc                                  <  1:1102692/150‑1 (MQ=255)
                                                                                                                    gggTTACGCCGGGAGAGCAGAAGCG‑CGGGCAAGATTGCCCGCGCGAGAAATCATTACGGCAGGACTTTAGCGGAAAGGATAACTACCGGTTTTGACGGCACATTCTGGTACGGACCAACGTCATTAGTCGGCACCTGGGAAATCTTATCg                                 <  2:1300576/150‑1 (MQ=255)
                                                                                                                    gggTTACGCCGGGAGAGCAGAAGCG‑CGGGCAAGATTGCCCGCGCGAGAAATCATTACGGCAGGACTTTAGCGGAAAGGATAACTACCGGTTTTGACGGCACATTCTGGTACGGACCAACGTCATGAGTCGGCACCTGGGAAATCTTATCg                                 <  1:221406/150‑1 (MQ=255)
                                                                                                                          cGCCGGGAGAGCAGAAGCG‑CGGGCCAGATTGCCCGCGCGAGAAATCATTACGGCAGGGCTTTAGCGGAAAGGATAACTACCGGTTTTGACGGCACATTCTGGTACGGACCAACGGCATGAGTCGGCCCCGGGGAAATCTTTTCGGCAACg                           >  1:1262305/1‑150 (MQ=255)
                                                                                                                                  gagCAGAAGCG‑CGGGCAAGATTGCCCGCGCGAGAAATCATTACGGCAGGACATTAGCGGAAAGGATAACTACCGGTATTGACGGCACATTCTGGTACGGACCAACGTCATGAGTCGGCACCTGGGAAATCTTATAGGCAACGTCCATGcc                   >  1:68182/1‑150 (MQ=255)
                                                                                                                                   atttctcgcg‑cGGGCAATCTTGCCCGCGCGAGAAATCATTACGGCAGGACTTTAGCGGAAAGGATAACTACCGGTTTTGACGGCACATTCTGGTACGGACCAACGTCATGAGTCGGCACCTGGGAAATCTTATCGGCAACGTCCATGCCt                  >  2:1064663/8‑150 (MQ=255)
                                                                                                                                     cAGAAGCG‑CGGGCAAGATTGCCCGCGCGAGAAATCATTACGGCAGGACTTTAGCGGAAAGGATAACTACCGGTTTTGACGGCACATTCTGGTACGGACCAACGTCATGAGTCGGCACCTGGGAAATCTTATCGGCAACGTCCATGCCttt                >  2:1259365/1‑150 (MQ=255)
                                                                                                                                      aGAATCG‑CGGGCAAGATTTCCCGCGCGAGAAATCATTACGGCAGGACTTTAGCGGAAAGGATAACTACCGGTTTTGACGGCACATTCTGGTACGGACCAACGTCATGAGTCGGCACCTGGGAAATCTTATCGGCAACGTCCATGCCTTTc               <  2:905315/150‑1 (MQ=255)
                                                                                                                                      aGAAGCG‑CGGGCAAGAGTGCCCGCGCGAGAAATCATTACGGCAGGACTTTAGCGGAAAGGATAACTACCGGTTTTGACGGCACATTCTGGTACGGACCAACGTCATGAGTCGGCACCTGGGAAATCTTATCGGCAACGTCCATGCCTTTc               <  1:1344244/150‑1 (MQ=255)
                                                                                                                                       gAAGCG‑CGGGCAAGATTGCCCGCGCGAGAAATCATTACGGCAGGACTTTAGCGGAAAGGATAACTACCGGTTTTGACGGCACATTCTGGTACGGACCAACGTCATGAGTCGGCACCTGGGAAATCTTATCGGCAACGTCCATGCCTTTca              <  2:399166/150‑1 (MQ=255)
                                                                                                                                          gcg‑cGGGCAATCTTGCCCGCGCGAGAAATCATTACGGCAGGACTTTAGCGGAAAGGATAACTACCGGATTTGCCGGCACATTCTGGTACGGCCCAACGGCAGGAGTCGGCACCTGGGAAATGTTATCGGCAACTTCAATGCCTTTcccca           >  2:1340839/1‑150 (MQ=255)
                                                                                                                                           cg‑cgGGCAAGATTGCCCGCGCGAGAAATCATTACGGCAGGACTTTAGCGGAAAGGATAACTACCGGTTTTGACGGCACATTCTGGTACGGACCAACGTCATGAGTCGGCACCTGGGAAATCTTATCGGCAACGTCCATGCCTTTcaccac          <  2:1772453/150‑1 (MQ=255)
                                                                                                                                            g‑cgGGCATGATTGCCCGCGCGAGAAATCATTACGGCAGGACTTTAGCGGAAAGGATAACTACCGGTTTTGACGGCACATTCTGGTACGGACCAACGTCATGAGTCGGCACCTGGGAAATCTTATCGGCAACGTCCATGCCTTTCACCACt         <  2:1716286/150‑1 (MQ=255)
                                                                                                                                            g‑cgGGCAAGATTGCCCGCGCGAGAAATCATTACGGCAGGACTTTAGCGGAAAGGATAACTACCGGTTTTGACGGCACATTCTGGTACGGACCAACGTCATGAGTCGGCACCTGGGAAATCTTATCGGCAACGTCCATGCCTTTCACCACt         <  2:524017/150‑1 (MQ=255)
                                                                                                                                              cgGGCAAGATTGCCCGCGCGAGAAATCATTACGGCAGGACTTTAGCGGAAAGGATAACTACCGGTTTTGACGGCACATTCTGGTACGGACCAACGTCATGAGTCGGCACCTGGGAAATCTTATCGGCAACGTCCATGCCTTTCACCACtt        >  1:996277/1‑150 (MQ=255)
                                                                                                                                              cgGGCAAGATTGCCCGCGCGAGAAATCATTACGGCAGGACTTTAGCGGAAAGGATAACTACCGGTTTTGACGGCACATTCTGGTACGGACCAACGTCATGAGTCGGCACATGGGAAATCTTATCGGCAACGTCCATGCCTTTCACCACtt        >  1:462120/1‑150 (MQ=255)
                                                                                                                                               gggCAAGATTGCCCGCGCGAGAAATCATTACGGCAGGACTTTAGCGGAAAGGATAACTACCGGTTTTGACGGCACATTCTGGTACGGACCAACGTCATGAGTCGGCACCTGGGAAATCTTATCGGCAACGTCCATGCCTTTCACCACttt       >  1:1121146/1‑150 (MQ=255)
                                                                                                                                               gggCAAGATTGCCCGCGCGAGAAATCATTACGGCAGGACTTTAGCGGAAAGGATAACTACCGGTTTTGACGGCACATTCTGGTACGGACCAACGTCATGAGTCGGCACCTGGGAAATCTTATCGGCAACGTCCATGCCTTTCACCACttt       >  1:1396995/1‑150 (MQ=255)
                                                                                                                                               gggCAAGATTGCCCGCGCGAGAAATCATTACGGCAGGACTTTAGCGGAAAGGATAACTACCGGTTTTGACGGCACATTCTGGTACGGACCAACGTCATGAGTCGGCACCTGGGAAATCTTATCGGCAACGTCCATGCCTTTCACCACttt       >  1:159984/1‑150 (MQ=255)
                                                                                                                                               gggCAAGATTGCCCGCGCGAGAAATCATTACGGCAGGACTTTAGAGGAAAGGATAACTACCGGTTTTGACGGCACATTCTGGTACGGACCAACGTCATGAGTCGGCACCTGGGAAATCTTATCGGCAACGTCCATGCCTTTCACCACttt       >  1:1724848/1‑150 (MQ=255)
                                                                                                                                               gggCAAGATTGCACGCGCGAGAAATCATTACGGCAGGACTTTAGCGGAAAGCATAACTACCGGTTTTGACGGCACATTCTGGCACTGACCAACGTCATGAGTCGGCACCTGGGAAATCTTATCGGCAACGTCCATGCCTTTCACCACttt       <  1:1164349/150‑1 (MQ=255)
                                                                                                                                                  cAAGATTGCCCGCGCGAGAAATCATTACGGCAGGACTTTAGCGGAAAGGATAACTACCGGTTTTGACGGCACATTCTGGTACGGACCAACGTCATGAGTCGGCACCTGGGAAATCTTATCGGCAACGTCCATGCCTTTCACCACTTTAcc    <  2:1567636/150‑1 (MQ=255)
                                                                                                                                                  cAAGATTGCCCGCGCGAGAAATCATTACGGCAGGACTTTAGCGGAAAGGATAACTACCGGTTTTGACGGCACATTCTGGTACGGACCAACGTCATGAGTCGGCACCTGGGAAATCTTATCGGCAACGTCCATGCCTTTCACCACTTTAcc    <  2:907583/150‑1 (MQ=255)
                                                                                                                                                   aaGATTGCCCGCGCGATAAATCATTACGGCAGGACTTTAGCGGAAAGGATAACTAATTGTTTTGACAGTACATTCTGGTACGGACCAAAGTCATGAGTCGGCACCTGGGAAATCTTATCGGCAACGTCCAAGCCTTTCCCCACTAAACCa   <  2:290734/150‑1 (MQ=255)
                                                                                                                                                   aaGATTGCCCGCGCGAGAAATCATTACGGCAGGACTTTAGCGGAAAGGATAACTACCGGTTTTGACGGCACATTCTGGTACGGACCAACGTCATGAGTCGGCACCTGGGAAATCTTATCGGCAACGTCCATGCCTTTCACCACTTTACCa   <  1:219508/150‑1 (MQ=255)
                                                                                                                                                    aGATTGCCCGCGCGAGAAATCATTACTGCAGGACTTTAGCGGAAAGGATAACTACCGGTTTTGACGGCACATTCTTGTACGGACCAACGTCATGAGTCGGCACCTGGGAAATCTTATCGGCAACGTCCATGCCTTTCACCACTTTACCaa  <  2:110047/150‑1 (MQ=255)
                                                                                                                                                      |                                                                                                                                                   
TGAAAATTACGATTACGCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGCCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCG‑CGGGCAAGATTGCCCGCGCGAGAAATCATTACGGCAGGACTTTAGCGGAAAGGATAACTACCGGTTTTGACGGCACATTCTGGTACGGACCAACGTCATGAGTCGGCACCTGGGAAATCTTATCGGCAACGTCCATGCCTTTCACCACTTTACCAA  >  NC_000913/3491556‑3491852

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑