| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,781,103 | A→C | 13.9% | intergenic (+86/‑112) | lldD → / → trmL | L‑lactate dehydrogenase, FMN‑linked/tRNA Leu mC34,mU34 2'‑O‑methyltransferase, SAM‑dependent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,781,103 | 0 | A | C | 13.9% | 167.8 / 2.7 | 90 | intergenic (+86/‑112) | lldD/trmL | L‑lactate dehydrogenase, FMN‑linked/tRNA Leu mC34,mU34 2'‑O‑methyltransferase, SAM‑dependent |
| Reads supporting (aligned to +/- strand): ref base A (45/30); new base C (5/9); total (51/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.41e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCG > NC_000913/3780955‑3781250 | cAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGacac < 2:1141089/150‑1 (MQ=255)cAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCACACCCGAACCCACTACCTCAAGGAGAGGGGACCGTTCGGCGCGGTATGTACAACCTAACACTGAAACCacac > 2:1185415/1‑150 (MQ=255) ggtcTGTGTAATGCGTTGCCTGCGTCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCGTCACCCTATCCCGCTCCCTCTGCGTGAGGGGACCGTTCGGCGCTGTATGTACTGCCTCACTCTTAAACGACACCGc < 2:1458766/147‑1 (MQ=255) gggCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCGCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGTGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGc < 1:433968/150‑1 (MQ=255) gggCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGGGAGGGGACCGTTAGGGGCTGTAGGGACTCCCTCACTCTGAAACGCCACCGc > 1:1022936/1‑150 (MQ=255) gggCTGGGTAAAGAGTGGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGc < 2:1458762/150‑1 (MQ=255) ggCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCAAACCCAAACCCTCACCCACAGGGAGAGGGGACCGTTAGGCGCAGTATGTACTCCCTCACTCTTAAACGACACCCCa > 2:327993/1‑150 (MQ=255) gTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCttt < 2:1341128/150‑1 (MQ=255) tAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCtttt < 2:933690/150‑1 (MQ=255) gagTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTtc < 1:1462079/150‑1 (MQ=255) gTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTtctc < 1:57664/150‑1 (MQ=255) tGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATTCGGCATAGTCGTATGCGCCCACTAACAATAACCCTCACCCTCAGTGAGAGCGGACCGTTCGGCGCTGTAAGTAATCCCACCCTATGCAACGACCCCGCACTCTTTTTTTATccc > 1:258020/1‑150 (MQ=255) tGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATTGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGTGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTccc < 1:839356/150‑1 (MQ=255) ccTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTc < 1:538591/150‑1 (MQ=255) gCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGcc < 2:1654354/150‑1 (MQ=255) cTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCCCTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCg > 1:1096415/1‑150 (MQ=255) gCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCgggg < 1:1829184/150‑1 (MQ=255) gCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCgggg < 1:1339704/150‑1 (MQ=255) gCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGCACCCTAACCCAAACCCGGAGGGCGGGGGGGCCGTTAGGGGCGGTTTGTAATCCCTCACGCGGAAACCGCCCCGCCCGCTTTGTTTCGGCCTCGCCCCACCcggg > 1:737914/1‑150 (MQ=255) cTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTCACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTAATCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGga < 1:84504/150‑1 (MQ=255) ccATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGGCCGTTCGGCGCTGGATGTACACCCTCACTCTGAAACGGAACCGCACTCATTTTTACTACATCGCCCCTCCGGGGagag > 2:76380/1‑150 (MQ=255) gCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCAAACCCTCTCCCGCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACCCTGAACCGACACCCCCCTCTTGTTTTCTCCCGCGCCCCTCCGGGgggcggggcg > 2:291537/1‑150 (MQ=255) cGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCACACCCTAACCCACAACCGCAGGGAGAGGGGACCCTTGGGCGCTGTATGTACAACCTCACTCTGGAACGACACCGCCCACATTTTTTATACCACCCCCCGCCGGGGGGAGGGGCgg > 2:454764/1‑150 (MQ=255) cGAAAGGGAATGCGGCATAGTCGCTTGCGCCCCCACACCCTAACCCTCTCCCTCCGGGAGAGGGGACCGTCCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCgg < 1:156963/150‑1 (MQ=255) gAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCggg < 1:589719/150‑1 (MQ=255) aGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGCCCCCGCACACTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTg > 2:61054/1‑150 (MQ=255) ggAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGTGAGGGGACCGGTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCCCTCTTTTTTTCTCCCTCGCCCCGCCGGGGAGAGGGGGCGGGTGAg > 2:700657/1‑150 (MQ=255) ggAATGCGGCATAGTCGTTTGCGCCCCCTAACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATTTACTCCCTCACTCAGAAAAGCCACCGGAAGCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAg > 2:365513/1‑150 (MQ=255) aaTGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACGCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAggg < 1:543416/150‑1 (MQ=255) aaTGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCCCAGGGAGAGGGGACCGTTCGGCGCTGTATGGACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAggg < 1:1651083/150‑1 (MQ=255) aaTGCGGCATAGGCGTTTGCGCCCCCTCAGCCACACCCTCACCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAggg < 1:1459183/150‑1 (MQ=255) cGGCATAGTCGTTTGCGCCCCCACACCCAAACCCACACCCAAAGGGAGCGGGGGCCGTGCGGCGCAGGATGTACTACCACACACGGAAACCCCACCGCCAGCTTTTTTTATCCCTAGCCCCTCCGGGGAGAGGGCCGGGGGGGGGGGaaa > 2:1754516/1‑150 (MQ=255) ggCATAGTCGTTTGCGCCCCCGCCCCCAAACCCACTCCCTCAGGGAGCGGGGGCCGGTCGGCGCGGTTTGTTCTGCCACCCACTGCAACGCCCCCCCCCTCGTTTTTTCTCCCGCGCCCCGCCGGGGCGCGGGCCGGGGGGAGGGGgaaa > 2:698656/1‑150 (MQ=255) cGTTTGCGCCCCCACACCCTAACCCTCACCCTCAGGGAGAGGGGACCGTTAGGCGCTGTATGTACTCCCGCCGTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCGCCGGGCAGACGGCCGGGGTGAGGGGAGAAGGCCGCAc > 2:1283872/1‑150 (MQ=255) tGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGCACCGACCCCGCACTCTTTTTTTCTCCCTCACCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCt > 1:1218001/1‑150 (MQ=255) cgcCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCGCACTCTGAAACGACACCGCACTCTTTTTTTCTACCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCGCTGCTcc > 1:1612300/1‑149 (MQ=255) gcCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCCCTGCGCAc > 2:894160/1‑150 (MQ=255) cccccTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGGCACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCAcc > 1:216143/1‑150 (MQ=255) cccTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCCCTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCaa > 1:889725/1‑150 (MQ=255) cccTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAATGGCCGCCGTGCGCACCac > 2:95328/1‑149 (MQ=255) cACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGCCACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAAtttt > 1:787517/1‑150 (MQ=255) ccccaaccccTCTCCCTCCGTGAGTGGGGACGGGTCGGCGCTGTTTGTACTCCCTCCCTCTCAAACGACACGGCAGTCTTTTTTTCCCCCTGCCCCCTCGGGGGCGTGGGCGGGGGTGCGGGGAAAAGGCCGCACTGCTCACCAATTTTc < 2:431163/143‑1 (MQ=255) ccccTACCCCTCTCCCTCAGGGCTTGGGGACCGTTCGGCGCTGAATGTACTCCCTCCCTCTGACCCGACCCCCCCCTCTTTTTTTCTCCCTCGCCCCTCCGGGGTGTGGGCCGGGGGGAGGGGAAAAGGCCGCACTGCTCACCAATTTTc < 2:1051762/149‑1 (MQ=255) aCCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGGGAGGGGAAAAGGCCGCACTGCTCACCAATTTTc > 2:1174144/1‑150 (MQ=255) cccTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTACCTCACTCTGAAACGACGCCGCAATCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCCCCAATGTTcg > 2:283577/1‑149 (MQ=255) cccAAACCCTCCCCCATCGGGTGAGGGGACCGACCGTCGCTGTATGTACTCCAACACTCAGAACCCACCCCCCAATTTTTTTTTCTCCCCCGCCCCTCCGGGGAGGGGGCCGGGGTGTGGGTAAAAGGCCGCACTGCTCACCAATTTTCt < 2:1661518/150‑1 (MQ=255) ccTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTg < 2:1288187/150‑1 (MQ=255) aaaaCCCTCTCCCTCTGGGAGAGGGGACGTTTCGGCGCTGTATGTACTCCCTCACGCTGAAACGACACCGCACACTTTTTTTCGCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGc < 2:121538/148‑1 (MQ=255) ccTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCGCACCAATTTTCTGCTATcc > 1:834676/1‑150 (MQ=255) tctcCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTg > 2:1284341/1‑150 (MQ=255) tcCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGcc > 1:590415/1‑150 (MQ=255) tcCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGGGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGcc < 1:1081016/150‑1 (MQ=255) cTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAACCGACACCGCCCTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGccccc > 1:1097/1‑150 (MQ=255) cTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGccccc > 2:5372/1‑150 (MQ=255) tCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCg > 1:373649/1‑150 (MQ=255) gggtgcggggACCGTCCGGCGGTGTATGACCACCCTCCCTCTCAACCCACCCCGCACGCTTTTTTTCCCCCTCGCCCCTCCGGGGCGCGGGCGGGGGGGAGGGTAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCAc < 1:132168/144‑1 (MQ=255) ggAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCACCGCGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTCCTATCCTGCCCCCGCACt > 2:733972/1‑150 (MQ=255) gagaGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTG‑CCCCGCACTaa > 2:870125/1‑150 (MQ=255) tggggACCGTGCGGCGCTTTATTTACTCCCTCACTCTGAACCGACACCGCACTATTTTTTTCTCCCTCGCCCCTCGGGGGTGAGGGCCGGGGTGTGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAgg < 1:1890706/149‑1 (MQ=255) ggggACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCGCTAAggg > 2:475305/1‑150 (MQ=255) ggggACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAggg > 1:1752339/1‑150 (MQ=255) ggggACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAggg > 1:9216/1‑150 (MQ=255) ggggACCGTTCGGCGCTGTATGTACACCCTCACTCTGAAACGACACCGCACCCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTTAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAggg < 2:64068/150‑1 (MQ=255) gcccGTGCGGCGCTGTTTTTACCCCCTCACTCTCAACCCCCCCCCCACTTTTTTTTCCTCCCCCCCCCCGCGGGGGTGTGGGCGGGGGTGCGGGTAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGc < 2:414710/148‑1 (MQ=255) gACGGTTCGGCGCTGTATGTACTCCCTCACTCTGAACCGACCCCGCACTTTTTTTTTCTCCGTCCCCCCTCCGGGGTGTGGGCCGGGGTGCGGGTAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGc < 1:327993/150‑1 (MQ=255) gACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGc < 2:235492/150‑1 (MQ=255) gACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGATATCCTGCCCCCGCACTAAGGGGGc > 2:1792215/1‑150 (MQ=255) ccGTTCGGCGCTGTATGTACTCCCTCACTCTGAACCGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCCATTTTCTGCTATCCTGCCCCCGCCCGAAGGGGGCAg > 1:963736/1‑150 (MQ=255) ccGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAg > 1:1610236/1‑150 (MQ=255) ccGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACT‑AGGGGGCAGt > 2:1095010/1‑150 (MQ=255) cGTGCGGCGGTTTTTGAACCCCCTCACTCACAAACCCCCCCGCACTTTTTTTTTCTCCCCCGCCCCGCCGGGGCGGGGGCGGGGGTGCGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGt < 2:483566/150‑1 (MQ=255) ttCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTAt > 1:771762/1‑150 (MQ=255) gggCGCTGTATGTACTCCCGCACTCGCAACCGACACCGCCCTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGc < 1:77872/149‑1 (MQ=255) cGGCGCTGTTTGTACTCCCTCACTCTCAACCGACCCCCCACTCTTTTTTTCTCCCGCGCCCCTCCGGGGAGAGGGCCGGGGGGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCTTAGTGCGGGGGCAGGAtag < 1:61054/150‑3 (MQ=255) ccgcTGTATGTACTCCCTCCGTGTGAACCGCCACCGCACTCTTTTTTTCACCCTCGCCACTCCGTGGATAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTa < 2:1366423/149‑1 (MQ=255) gcTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTaaa > 2:1813297/1‑150 (MQ=255) taacaccccCACTCTCAAACCCCACCTCCCTTTTTTTACCCCCCGCCCCCCGCGGGGGGGTGGGCGGGGGGGCGGGCAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTa < 2:1474806/145‑1 (MQ=255) accccctccctCTTACCCCACCCCCCACTCTTTTTTTCCCCCCCGCCCCGCGGGGGTGTGGGGGGGGGGGTGGGCAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACt < 2:886750/147‑1 (MQ=255) cTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACtt > 1:1852388/1‑150 (MQ=255) ccccTCACTCTGACACGACACCGCACTATTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACttt < 2:910138/149‑1 (MQ=255) cctacACTCTAAAACCACCCCGCATTATTTTTTTCTCCATCCCCCCTCCGGGTTGTGGGCGGGGGTTTGGGGACAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTa < 2:1665850/146‑1 (MQ=255) cccTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCATCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTATGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTa > 2:1610751/1‑150 (MQ=255) cccTCACTCTGAAACGACACAGCACTCATATATTCTCCCTCGCCACTCCGGGGAGAGGTCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTATCTGCTATCCTGCCCCCGCTCTTAGGGGGCAGTATGCTAAACATCCTACTTTa > 1:940579/1‑150 (MQ=255) ccTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTAc > 2:337292/1‑150 (MQ=255) ccTCACGCTGAAACGACACCCCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTAc < 2:306382/150‑1 (MQ=255) ctctGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAAcc > 2:651999/1‑150 (MQ=255) ctctGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAAcc > 2:615474/1‑150 (MQ=255) ctGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAAcaat > 2:1232544/1‑147 (MQ=255) ctGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAg > 1:1781330/1‑150 (MQ=255) ctGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAg > 1:465232/1‑150 (MQ=255) aaCGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAAt > 1:644403/1‑150 (MQ=255) aCGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTATACATCGTACTTTACGAACCAGAAAtt > 1:1468596/1‑150 (MQ=255) acacCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCg < 2:1096415/150‑1 (MQ=255) | CAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCG > NC_000913/3780955‑3781250 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |