| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3908393 | 204 (1.170) | 4 (0.020) | 4/264 | NT | 2.0% | noncoding (7/64 nt) | REP283 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP283 (repetitive extragenic palindromic) element; contains 2 REP sequences |
| ? | NC_000913 | = 3908404 | NA (NA) | noncoding (18/64 nt) | REP283 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP283 (repetitive extragenic palindromic) element; contains 2 REP sequences | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CCCGATAAACGCCGTTACCTGGTTTTTAGCGATATCCAGGTTGATGTTTTTCAGGGCATGGAATTTGCCGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3908238‑3908393‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctgatTAGCGAAGTGCATCAGGCACGATGAGGAAAAGATTGCAATGAGTATGGTTGAAACTGCCCCGAGTAAAATTCAGGTTCGTAATTTGAACTTCTACTACGGCAAATTCCATGCCCTGAAAAACATCAACCTGGATATCGCTAAAAACCAG < NC_000913/3908404‑3908256 CCCGATAAACGCCGTTACCTGGTTTTTAGCGATATCCAGGTTGATGTTTTTCAGGGCATGGAATTTGCCGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTG < 1:2766918/150‑1 CCGATAAACGCCGTTACCTGGTTTTTAGCGATATCCAGGTTGATGTTTTTCAGGGCATGGAATTTGCCGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGC > 2:1891190/1‑150 CCGATAAACGCCGTTACCTGGTTTTTAGCGATATCCAGGTTGATGTTTTTCAGGGCATGGAATTTGCCGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGC < 1:2371902/150‑1 CCGATAAACGCCGTTACCTGGTTTTTAGCGATATCCAGGTTGATGTTTTTCAGGGCATGGAATTTGCCGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGC > 1:2483725/1‑150 CGATAAACGCCGTTACCTGGTTTTTAGCGATATCCAGGTTGATGTTTTTCAGGGCATGGAATTTGCCGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCC > 2:2121028/1‑150 GATAAACGCCGTTACCTGGTTTTTAGCGATATCCAGGTTGATGTTTTTCAGGGCATGGAATTTGCCGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCT > 1:2775582/1‑150 ATAAACGCCGTTACCTGGTTTTTAGCGATATCCAGGTTGATGTTTTTCAGGGCATGGAATTTGCCGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTG < 1:964580/150‑1 ATAAACGCCGTTACCTGGTTTTTAGCGATATCCAGGTTGATGTTTTTCAGGGCATGGAATTTGCCGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTG < 1:964518/150‑1 TAAACGCCGTTACCTGGTTTTTAGCGATATCCAGGTTGATGTTTTTCAGGGCATGGAATTTGCCGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGA > 2:971151/1‑150 TAAACGCCGTTACCTGGTTTTTAGCGATATCCAGGTTGATGTTTTTCAGGGCATGGAATTTGCCGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGA < 2:791168/150‑1 TAAACGCCGTTACCTGGTTTTTAGCGATATCCAGGTTGATGTTTTTCAGGGCATGGAATTTGCCGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGA < 2:791131/150‑1 AAACGCCGTTACCTGGTTTTTAGCGATATCCAGGTTGATGTTTTTCAGGGCATGGAATTTGCCGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGAT > 2:2775247/1‑150 AAACGCCGTTACCTGGTTTTTAGCGATATCCAGGTTGATGTTTTTCAGGGCATGGAATTTGCCGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGAT < 1:2816761/150‑1 AAACGCCGTTACCTGGTTTTTAGCGATATCCAGGTTGATGTTTTTCAGGGCATGGAATTTGCCGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGAT < 1:1596072/150‑1 GGTTTTTAGCGATATCCAGGTTGATGTTTTTCAGGGCATGGAATTTGCCGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATTAGCGAAGTGCATC < 2:916219/150‑1 TTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATTAGCGAAGTGCATCAGGCACGATGAGG < 2:2050390/104‑1 TTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATTAGCGAAGTGCATCAGGCACGATGAGG > 1:2050390/1‑104 AACCTGAATTTTACTCGGGGCAGTTTCAACCAGACTCATTGCAAGCTTTTCCTCCTCGTGCCTGATTAGCGAAGTGCATCAGGCACGCTGAGGAAAAGATTGCAATGAGTATGGTTGAAACTGCCCCGAGTAAAATTCAGGTTCGTAATT < 2:1610127/150‑1 TGATTAGCGAAGTGCATCAGGCACGATGAGGAAAAGATTGCAATGAGTATGGTTGAAACTGCCCCGAGTAAAATTCAGGTTCGTAATTTGAACTTCTACTACGGCAAATTCCATGCCCTGAAAAACATCAACCTGGATATCGCTAAAAAC < 1:1288218/150‑1 TGATTAGCGAAGTGCATCAGGCACGATGAGGAAAAGATTGCAATGAGTATGGTTGAAACTGCCCCGAGTAAAATTCAGGTTCGTAATTTGAACTTCTACTACGGCAAATTCCATGCCCTGAAAAACATCAACCTGGATATCGCTAAAAAC < 1:2313936/150‑1 TGATTAGCGAAGTGCATCAGGCACGATGAGGAAAAGATTGCAATGAGTATGGTTGAAACTGCCCCGAGTAAAATTCAGGTTCGTAATTTGAACTTCTACTACGGCAAATTCCATGCCCTGAAAAACATCAACCTGGATATCGCTAAAAAC < 1:1288166/150‑1 GATTAGCGAAGTGCATCAGGCACGATGAGGAAAAGATTGCAATGAGTATGGTTGAAACTGCCCCGAGTAAAATTCAGGTTCGTAATTTGAACTTCTACTACGGCAAATTCCATGCCCTGAAAAACATCAACCTGGATATCGCTAAAAACC > 2:2251829/1‑150 GATTAGCGAAGTGCATCAGGCACGATGAGGAAAAGATTGCAATGAGTATGGTTGAAACTGCCCCGAGTAAAATTCAGGTTCGTAATTTGAACTTCTACTACGGCAAATTCCATGCCCTGAAAAACATCAACCTGGATATCGCTAAAAACC > 1:1980816/1‑150 ATTAGCGAAGTGCATCAGGCACGATGAGGAAAAGATTGCAATGAGTATGGTTGAAACTGCCCCGAGTAAAATTCAGGTTCGTAATTTGAACTTCTACTACGGCAAATTCCATGCCCTGAAAAACATCAACCTGGATATCGCTAAAAACCA > 1:2841897/1‑150 ATTAGCGAAGTGCATCAGGCACGATGAGGAAAAGATTGCAATGAGTATGGTTGAAACTGCCCCGAGTAAAATTCAGGTTCGTAATTTGAACTTCTACTACGGCAAATTCCATGCCCTGAAAAACATCAACCTGGATATCGCTAAAAACCA > 1:2720077/1‑150 ATTAGCGAAGTGCATCAGGCACGATGAGGAAAAGATTGCAATGAGTATGGTTGAAACTGCCCCGAGTAAAATTCAGGTTCGTAATTTGAACTTCTACTACGGCAAATTCCATGCCCTGAAAAACATCAACCTGGATATCGCTAAAAACCA < 1:271016/150‑1 ATTAGCGAAGTGCATCAGGCACGATGAGGAAAAGATTGCAATGAGTATGGTTGAAACTGCCCCGAGTAAAATTCAGGTTCGTAATTTGAACTTCTACTACGGCAAATTCCATGCCCTGAAAAACATCAACCTGGATATCGCTAAAAACCA < 2:2647967/150‑1 ATTAGCGAAGTGCATCAGGCACGATGAGGAAAAGATTGCAATGAGTATGGTTGAAACTGCCCCGAGTAAAATTCAGGTTCGTAATTTGAACTTCTACTACGGCAAATTCCATGCCCTGAAAAACATCAACCTGGATATCGCTAAAAACCA < 1:2500133/150‑1 ATTAGCGAAGTGCATCAGGCACGATGAGGAAAAGATTGCAATGAGTATGGTTGAAACTGCCCCGAGTAAAATTCAGGTTCGTAATTTGAACTTCTACTACGGCAAATTCCATGCCCTGAAAAACATCAACCTGGATATCGCTAAAAACCA < 1:1904583/150‑1 TTAGCGAAGTGCATCAGGCACGATGAGGAAAAGATTGCAATGAGTATGGTTGAAACTGCCCCGAGTAAAATTCAGGTTCGTAATTTGAACTTCTACTACGGCAAATTCCATGCCCTGAAAAACATCAACCTGGATATCGCTAAAAACCAG < 2:1464649/150‑1 CCCGATAAACGCCGTTACCTGGTTTTTAGCGATATCCAGGTTGATGTTTTTCAGGGCATGGAATTTGCCGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3908238‑3908393‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctgatTAGCGAAGTGCATCAGGCACGATGAGGAAAAGATTGCAATGAGTATGGTTGAAACTGCCCCGAGTAAAATTCAGGTTCGTAATTTGAACTTCTACTACGGCAAATTCCATGCCCTGAAAAACATCAACCTGGATATCGCTAAAAACCAG < NC_000913/3908404‑3908256 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |