| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,229,177 | A→C | 18.9% | intergenic (+112/+261) | yohP → / ← dusC | uncharacterized protein/tRNA‑dihydrouridine synthase C |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,229,177 | 0 | A | C | 18.9% | 132.8 / 7.6 | 79 | intergenic (+112/+261) | yohP/dusC | uncharacterized protein/tRNA‑dihydrouridine synthase C |
| Reads supporting (aligned to +/- strand): ref base A (14/36); new base C (10/2); total (32/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.83e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TACTGGTGGTGACTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCAGGGGGC‑GGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATG > NC_000913/2229028‑2229326 | tACTGGTGGTGACTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCa < 1:2776663/150‑1 (MQ=255) cTGGTGGTGACTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCAgg < 2:2084597/150‑1 (MQ=255) cTGGTGGTGACTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCAgg < 2:2084642/150‑1 (MQ=255) tggtggTGACTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCCggg > 2:1610024/1‑150 (MQ=255) gtggtgACTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCgggggggg > 2:792868/1‑150 (MQ=255) gtggtgACTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCAggggg < 1:1611545/150‑1 (MQ=255) ggtgACTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCAGGGggc‑g < 2:2133046/150‑1 (MQ=255) ggtgACTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCAGGGggc‑g < 2:360960/150‑1 (MQ=255) tgACTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCCCGGggc‑ggc > 2:1500748/1‑150 (MQ=255) aCTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCAGGGGGC‑GGCCa > 2:1729733/1‑150 (MQ=255) tGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGGCCGGGGC‑GGcccaa > 2:589238/1‑147 (MQ=255) tGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCAGGGGGC‑GGCCaaa > 2:2848831/1‑149 (MQ=255) tGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCAGGGGGC‑GGCCaaa > 2:708951/1‑149 (MQ=255) tGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCAGGGGGC‑GGCCCAt > 2:1572518/1‑150 (MQ=255) tGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCAGGGGGC‑GGCCAAt < 1:1720203/150‑1 (MQ=255) tGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCAGGGGGC‑GGCCAAt < 1:1788695/150‑1 (MQ=255) tGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCAGGGGGC‑GGCCAAt < 1:1788483/150‑1 (MQ=255) ggCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCAGGGGGC‑GGCCAATc < 1:2554349/150‑1 (MQ=255) gCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCAGGGGGC‑GGCCAATcg > 1:2541946/1‑150 (MQ=255) cGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCAGGGGGC‑GGCCAATcgc < 1:1939167/150‑1 (MQ=255) gTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCCCCGGGC‑GGccccacccc > 2:2059885/1‑143 (MQ=255) aTTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCAGGGGGC‑GGCCAATcgccgc < 2:2179308/150‑1 (MQ=255) ttAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCAGGGGGC‑GGCCAATcgccgccg < 1:1437093/150‑1 (MQ=255) ttAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCAGGGGGC‑GGCCAATcgccgccg < 1:883219/150‑1 (MQ=255) tgatATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCAGGGGGC‑GGCCAATCGCCGCCGCCCCCt < 1:681353/150‑1 (MQ=255) tgatATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCAGGGGGC‑GGCCAATCGCCGCCGCCCCCt < 1:677362/150‑1 (MQ=255) gatATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGGCCGGGGC‑GGCCCAACcccccccccccccc > 2:861260/1‑148 (MQ=255) ttttAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCAGGGGGC‑GGCCAATCGCCGCCGCCCCCTGCAcc < 1:424467/150‑1 (MQ=255) tttAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGGGGGGGGC‑GGCCCCACGCCCCCCCCCCCCGCcccc > 1:2760723/1‑150 (MQ=38) tttAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCGGGGGGC‑GGGCCCGCGCCCCCCCCCCCCCCAccc > 1:604896/1‑150 (MQ=38) tttAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCAGGGGGC‑GGCCCAACGCCGCCGCCCCCGGCAccc > 2:2187754/1‑150 (MQ=255) aattaattAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCGGGGGGG‑GGCCCAACGCCGCCGCCCCCCCCAcccccccg > 1:51431/1‑147 (MQ=38) attaattaATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGGGGGGGGG‑GGGCCCACGCCGCccccccccccccccccccgc > 2:63412/1‑146 (MQ=255) attaattaATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCCGGGGGCGGGCCAAAC‑CCCCCCCCCCCCGCACCCCCCGGc > 2:2058694/1‑150 (MQ=255) taattaatGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGTGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGGGGGGGGG‑GGGCCAGCGGCGCCGCCCCCCCCACCCCCcgggcc > 2:2750800/1‑147 (MQ=255) taattaatGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGGGGGGGGG‑GGGCCCGCGCCCCCCCCCCCCCAAccccccccccc > 1:1300759/1‑144 (MQ=255) taattaatGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGGGGGGGGCGGGCCAAAC‑CCCCCCCCCCCCCCAccccccccccc > 1:545681/1‑144 (MQ=255) taattaatGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCCCGGGGC‑GGCCCAACGCCGCCCCCCCCAGCCCCCCCCGGctc > 2:918009/1‑150 (MQ=37) taattaatGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCAGGGGGC‑GGCCCAACGCCCCCCCCCCCCCCAACCCCCGGcgc > 2:917960/1‑148 (MQ=37) taatGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAACGCGCAGGGGGC‑GGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGc < 2:2599072/150‑1 (MQ=255) atcaGGTCCTAAAATAACTATAATATTTCTGTCTCTCATCCTGTTGCGCTCCTGTCTTGTGCTTTGCTTCATATAATCCCGGGCGAATGGAGGGGGCTGGGGGC‑GGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACaaa < 1:1686154/150‑1 (MQ=21) atcaGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCCGGGGGG‑GGGCCATCGCCCCCCCCCCCCGCACCCCCCGGCGCAGGCGGACcaa > 1:2899495/1‑150 (MQ=255) tcaGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCGCGGGGC‑GGCCAAACGCCCCCCCCCCCCGCCCCCCCCGGCGGTGGCGGACacaa > 2:2521178/1‑150 (MQ=25) gTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCAGGGGGG‑GGCCAATCGCCCCCGCCCCCACCACCCCCCGGCGCTGGCGAACaaaaaaga > 1:1205470/1‑146 (MQ=25) aTAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCAGGGGGC‑GGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTgcgc < 2:2609070/150‑1 (MQ=255) actttaaTTTTTCTGTCTCTCTTGCTGGTGCGCTCGTGTCTTGTGCTTTGCTTAATATAATCACGGGCGAATGGCGCGCGCTGGGGGC‑GGCAAACGGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGt < 1:2403056/145‑1 (MQ=17) aaTATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCACAGGGGGC‑GGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCt > 1:2749699/1‑150 (MQ=255) atgtctgTCTCTCATCCTGTTGCGCTCCGGTCATGGGCTTTGATTCATATAAGCCCTGGCGCAAGGAGGGCGCCGGGGGG‑GGCCAATCGCGGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCgg < 2:1110585/144‑1 (MQ=17) tttCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGCGCGCGCAGGGGGC‑GGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGc < 1:1937702/150‑1 (MQ=255) cAGTCTCTCAGCTTGTTGCGCTCCTGTCTTGTGATTTGCTTATTATAACCAGGGGCGCATGGCGCGCGCGGGGGGC‑GGCCACCCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAAAAAAATCGCCGCTGCGCGGTGCCCTCGGCTTa < 1:1292113/150‑1 (MQ=17) tctctcATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCAGGGGGC‑GGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATcc < 2:1625162/150‑1 (MQ=255) tctctcAGCCCGTTGCGCTCCGGTCATGCGCAGTGCTACATATACTCACTGGCGCAAGGAGCGCGCAGGGGGC‑GGCCACTCGCCGCCGCCCCCTGCACCCCCGGGCTCGGGCGCACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATcc < 2:2227104/150‑1 (MQ=17) cctctcAGCCTGGAGCGCTCCTGTCATGGGCAGTGCTGCATATACCCACTGGCGCAAGGAGCGCGCAGGGGGC‑GGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATcc < 2:2227088/149‑1 (MQ=14) tcttcttGTTGCGCTCCGGTCTTGTGCATTGCTTAATATAATCAGGGGCGCATGGAGCGCGCAGGGGGC‑GGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTa < 1:2556349/144‑1 (MQ=17) tcATCCTGTTGCGCTCCTGTCATGTGCTTTGCTTCATTTAATCACGGGCGCATGGAGCGCGCCGGGGGC‑GGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTa < 1:454285/150‑1 (MQ=17) aTCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCAGGGGGC‑GGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACg < 2:1894459/150‑1 (MQ=255) aTCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCAGGGGGC‑GGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACg < 2:2541946/150‑1 (MQ=255) gcgcTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCAGGGGGC‑GGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCgg < 2:2301472/150‑1 (MQ=255) cTCCTGTCTTGTGCTTTGATTCATATAATCACTGGCGCAAGGAGCGCGCGGGGGGC‑GGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTc < 1:1336287/150‑1 (MQ=255) ccTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCAGGGGGC‑GGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCgg < 2:1435437/150‑1 (MQ=255) ccTGTCATGTGCATTGCTTCATATAATCACTGGCGAATGGAGCGCGCTGGGGGC‑GGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCgg < 1:63412/150‑1 (MQ=255) cttgtgCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCAGGGGGC‑GGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGcgcg < 1:162342/148‑1 (MQ=255) gtgCATTGCTTCATATAATCACTGGCGCATGGAGCGCGCTGGGGGG‑GGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAgg < 1:302524/150‑1 (MQ=255) ttGCTTCATATAATCACTGGCGCAAGGAGCGCGCAGGGGGC‑GGCCAATAGCCCCCCCCCCCAGCACCCCCCGGCTCTGGCGCAAAAAAACCCCGCGGCGCGGGGCCCGCGGCGTATACCATACGGCTACCCGGGCGGGCGCCCGGGAACa > 2:1872621/1‑150 (MQ=9) ttCATATAATCACTGGCGCAAGGAGCGCGCTGGGGGC‑GGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATccc < 1:589238/150‑1 (MQ=255) ttCATATAATCACTGGCGCAAGGAGCGCGCCGGGGGC‑GGCCCAAACCCCCCCCCCCCCGCAACCCCCGGCTCAGGCGAACAAAAAAGCCCCGGCCCGGTGCCCGCCGCGTAACCCATACGGCTACCCGGGCGGGCGCGCGGTAAAAAccc > 2:2622312/1‑150 (MQ=255) ttCATATAATCACTGGCGCAAGGAGCGCGCAGGGGGC‑GGCCCAACGCCGCCCCCCCCAGCCCCCCCCGGCTGGGGCGGACAAAAACGCCCCAGCGCCGTGCCCCACGCGTATCCCATAACGCTACCGGGTCGGGCGCGCGGGAACATccc > 2:2403272/1‑150 (MQ=9) ttCATATAATCACTGGCGCAAGGAGCGCGCAGGGGGC‑GGCCAAAACCCCCCCCCCCCAGCCCCCCCCGGCGCAGGCGAACAAAAAACCCCCGGCGCGGGGCCCGCGGCTTAAACCCTACCGCTACCCGGTCGGGCGCGCGGTAACaaacc > 2:2403198/1‑146 (MQ=9) tCATATACGCCCTGGCGCAAGGTGCGCGCTGGGGGC‑GGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCt < 1:2061327/150‑1 (MQ=11) aTCACTGGCGCAAGGAGCGCGCAGGGGGC‑GGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAAc < 1:2059885/150‑1 (MQ=33) aCTGGCGCAAGGAGCGCGCCGGGGGG‑GGCCCAACGCCGCCGCCCCCGGCACCCCCCGGCGCGGGCGCACAAAAACGCCCCCGCGCGGGGCCCGCCGCGGATCCCAGAAGGCTACCGGGGCGGGCGCGGGGGGACAAACCAGTAAAAcccg > 2:1859066/1‑150 (MQ=2) cTGGCGCAAGGAGCGCGCAGGGGGC‑GGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACgcgc < 2:1452226/150‑1 (MQ=32) tGGCGCAAGGAGCGCGCTGGGGGC‑GGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGcc < 1:2032327/150‑1 (MQ=17) tGGCGCAAGGAGCGCGCAGGGGGC‑GGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGcc < 1:1610024/150‑1 (MQ=32) ggCGCAAGGAGCGCGCAGGGGGC‑GGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGccc < 2:694279/150‑1 (MQ=32) cacggAGCGCGCAGGGGGC‑GGCCACTCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAg < 1:2622237/147‑1 (MQ=17) aaGGAGCGCGCAGGGGGC‑GGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGc < 1:2797178/150‑1 (MQ=32) gcgcAGGGGGC‑GGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATc < 1:1492770/150‑1 (MQ=32) cgcAGGGGGC‑GGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATcc > 2:2836984/1‑150 (MQ=32) cgcAGGGGGC‑GGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATcc > 2:1658614/1‑150 (MQ=32) gcAGGGGGC‑GGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCa < 2:2281034/150‑1 (MQ=32) aGGGGGC‑GGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCAtg > 2:2911081/1‑150 (MQ=32) | TACTGGTGGTGACTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCAGGGGGC‑GGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATG > NC_000913/2229028‑2229326 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |