| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4522053 = | 135 (1.040) | 3 (0.030) | 3/256 | NT | 2.5% | intergenic (‑33/+74) | yjhF/yjhG | putative transporter/putative dehydratase |
| ? | NC_000913 | 4522097 = | 111 (0.930) | intergenic (‑77/+30) | yjhF/yjhG | putative transporter/putative dehydratase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CCGTGAGTGGTGGGACATGGACCGGTTGTATTTATGATGTAAACAAAATTGGCGCGGCTTTGCGCGATTTTATGAATAAAAACTGAAAGCATAAATAAAAACATCCAGACACCTGAATTATCCGACTCTGCATCATTCGTTATTTGCTCAGTCGGATAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4522212‑4522053‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agtcggataatTCAGGTGTCTGGATGTTTTTATTTATGCTTTCAGTTTTTATTCATAAAATCGCGCAAAGCCGCGCCAATTTTGTTTACATCATAAATACAACCGGTCCATGTCCCACCACTCACGGCCTGAAGCATTGCCCATAGCCGGGTATCATCTG > NC_000913/4522097‑4522245 CCGTGAGTGGTGGGACATGGACCGGTTGTATTTATGATGTAAACAAAATTGGCGCGGCTTTGCGCGATTTTATGAATAAAAACTGAAAGCATAAATAAAAACATCCAGACACCTGAATTATCCGACTCTGCATCATTCGTTATTTGCTCA > 1:1302841/1‑150 CGTGAGTGGTGGGACATGGACCGGTTGTATTTATGATGTAAACAAAATTGGCGCGGCTTTGCGCGATTTTATGAATAAAAACTGAAAGCATAAATAAAAACATCCAGACACCTGAATTATCCGACTCTGCATCATTCGTTATTTGCTCAG < 1:999975/150‑1 GAGTGGTGGGACATGGACCGGTTGTATTTATGATGTAAACAAAATTGGCGCGGCTTTGCGCGATTTTATGAATAAAAACTGAAAGCATAAATAAAAACATCCAGACACCTGAATTATCCGACTCTGCATCATTCGTTATTTGCTCAGTCG > 1:79838/1‑150 GAGTGGTGGGACATGGACCGGTTGTATTTATGATGTAAACAAAATTGGCGCGGCTTTGCGCGATTTTATGAATAAAAACTGAAAGCATAAATAAAAACATCCAGACACCTGAATTATCCGACTCTGCATCATTCGTTATTTGCTCAGTCG < 1:53980/150‑1 AGTGGGGGGACATGGACCGGTTGTATTTATGATGTAAACAAAATTGGCGCGGCTTTGCGCGATTTTATGAATAAAAACTGAAAGCATAAATAAAAACATCCAGACACCTGAATTATCCGACTCTGCATCATTCGTTATTTGCTCAGTCGG < 1:1624492/150‑1 GTGGTGGGACATGGACCGGTTGTATTTATGATGTAAACAAAATTGGCGCGGCTTTGCGCGATTTTATGAATAAAAACTGAAAGCATAAATAAAAACATCCAGACACCTGAATTATCCGACTCTGCATCATTCGTTATTTGCTCAGTCGGA > 2:325225/1‑150 TGGTGGGACATGGACCGGTTGTATTTATGATGTAAACAAAATTGGCGCGGCTTTGCGCGATTTTATGAATAAAAACTGAAAGCATAAATAAAAACATCCAGACACCTGAATTATCCGACTCTGCATCATTCGTTATTTGCTCAGTCGGAT < 1:647709/150‑1 GGTGGGACATGGACCGGTTGTATTTATGATGTAAACAAAATTGGCGCGGCTTTGCGCGATTTTATGAATAAAAACTGAAAGCATAAATAAAAACATCCAGACACCTGAATTATCCGACTCTGCATCATTCGTTATTTGCTCAGTCGGATA > 1:184448/1‑150 GGTGGGACATGGACCGGTTGTATTTATGATGTAAACAAAATTGGCGCGGCTTTGCGCGATTTTATGAATAAAAACTGAAAGCATAAATAAAAACATCCAGACACCTGAATTATCCGACTCTGCATCATTCGTTATTTGCTCAGTCGGATA > 1:705728/1‑150 GGTGGGACATGGACCGGTTGTATTTATGATGTAAACAAAATTGGCGCGGCTTTGCGCGATTTTATGAATAAAAACTGAAAGCATAAATAAAAACATCCAGACACCTGAATTATCCGACTCTGCATCATTCGTTATTTGCTCAGTCGGATA > 2:1031922/1‑150 GTGGGACATGGACCGGTTGTATTTATGATGTAAACAAAATTGGCGCGGCTTTGCGCGATTTTATGAATAAAAACTGAAAGCATAAATAAAAACATCCAGACACCTGAATTATCCGACTCTGCATCATTCGTTATTTGCTCAGTCGGATAA > 1:17828/1‑150 GTGGGACATGGACCGGTTGTATTTATGATGTAAACAAAATTGGCGCGGCTTTGCGCGATTTTATGAATAAAAACTGAAAGCATAAATAAAAACATCCAGACACCTGAATTATCCGACTCTGCATCATTCGTTATTTGCTCAGTCGGATAA > 1:1656640/1‑150 GGGACATGGACCGGTTGTATTTATGATGTAAACAAAATTGGCGCGGCTTTGCGCGATTTTATGAATAAAAACTGAAAGCATAAATAAAAACATCCAGACACCTGAATTATCCGACTCTGCATCATTCGTTATTTGCTCAGTCGGATAATT > 1:2207879/1‑150 GGGACATGGACCGGTTGTATTTATGATGTAAACAAAATTGGCGCGGCTTTGCGCGATTTTATGAATAAAAACTGAAAGCATAAATAAAAACATCCAGACACCTGAATTATCCGACTCTGCATCATTCGTTATTTGCTCAGTCGGATAATT > 1:924715/1‑150 TTATGAATAAAAACTGAAAGCATAAATAAAAACAACCAGACACCTGAATTATCCGACTCTGCATCATTCGTTATTTGCTCAGTCGGATAATTCAGGTGTCTGGATGTTTTTATTTATGCTTTCAGTTTTAATTCATAAAATCGCGCAAAG < 2:486697/150‑1 CCTGAATTATCCGACTCTGCATCATTCGTTATTTGCTCAGTCGGATAATTCAGGTGTCTGGATGTTTTTATTTATGCTTTCAGTTTTTATTCATAAAATCGCGCAAAGCCGCGCCATTTTTGTTTACATCATAAATACAACCGGTCCATG > 1:251742/1‑150 TGAATTATCCGACTCTGCATCATTCGTTATTTGCTCAGTCGGATAATTCAGGTGTCGGGATGTTTTTATTTATGCTTTCAGTTTTTATTCATAAAATCGCGCAAAGCCGCGCCAATTTTGTTTACATCATAAATACAACCGGTCCATGTC > 2:203034/1‑150 AGTCGGATAATTCAGGTGTCTGGATGTTTTTATTTATGCTTTCAGTTTTTATTCATAAAATCGCGCAAAGCCGCGCCAATTTTGTTTACATCATAAATACAACCGGTCCATGTCCCACCACTCACGGCCTGAAGCATTGCCCATAGCCGG < 2:672549/150‑1 GTCGGATAAATCAGGTGTCTGGATGTTTTTATTTATGCTTTCAGTATTTATTCATAAAATCGCGCAATGCCGCGCCAATTTTGTTTACATCATAAATACAACCGGTCCATGGCCCACCACTCACGGCCTGAAGCATTGCCCATAGCCGGG < 1:215939/150‑1 CGGATAATTCAGGTGTCTGGATGTTTTTATTTATGCTTTCAGTTTTTATTCATAAAATCGCGCAAAGCCGCGCCAATTTTGTTTACATCATAAATACAACCGGTCCATGTCCCACCACTCACGGCCTGAAGCATTGCCCATAGCCGGGTA < 1:801316/150‑1 CGGATAATTCAGGTGTCTGGATGTTTTTATTTATGCTTTCAGTTTTTATTCATAAAATCGCGCAAAGCCGCGCCAATTTTGTTTACATCATAAATACAACCGGTCCATGTCCCACCACTCACGGCCTGAAGCATTGCCCATAGCCGGGTA > 1:2011666/1‑150 CGGATAATTCAGGTGTCTGGATGTTTTTATTTATGCTTTCAGTTTTTATTCATAAAATCGCGCAAAGCCGCGCCAATTTTGTTTACATCATAAATACAACCGGTCCATGTCCCACCACTCACGGCCTGAAGCATTGCCCATAGCAGGGTA > 2:1745971/1‑150 CGGATAATTCAGGTGTCTGGATGTTTTTATTTATGCTTTCAGTATTTATTCATAAAATCGCGCAAAGCTGCGCCAATTTTGTTTACATCATAAATACAACCGGTCCATGTCCCACCACTCACGGCCTGAAGCATTGCCCATAGCCGGGTA < 2:1949534/150‑1 GGATAATTCAGGTGTCTGGATGTTTTTATTTATGCTTTCAGTTTTTATTCATAAAATCGCGCAAAGCCGCGCCAATTTTGTTTACATCATAAATACAACCGGTCCATGTCCCACCACTCACGGCCTGAAGCATTGCCCATAGCCGGGTAT < 2:1782583/150‑1 AATTCAGGTGTCTGGATGTTTTTATTTATGCTTTCAGTTTTTATTCATAAAATCGCGCAAAGCCGCGCCAATTTTGTTTACATCATAAATACAACCGGTCCATGTCCCACCACTCACGGCCTGAAGCATTGCCCATAGCCGGGTATCATC < 2:1454673/150‑1 AATTCAGGTGTCTGGATGTTTTTATTTATGCTTTCAGTTTTTATTCATAAAATCGCGCAAAGCCGCGCCAATTTTGTTTACATCATAAATACAACCGGTCCATGTCCCACCACTCACGGCCTGAAGCATTGCCCATAGCCGGGTATCATC < 1:1747252/150‑1 TTCAGGTGTCTGGATGTTTTTATTTATGCTTTCAGTTTTTATTCATAAAATCGCGCAAAGCCGCGCCAATTTTGTTTACATCATAAATACAACCGGTCCATGTCCCACCACTCACGGCCTGAAGCATTGCCCATAGCCGGGTATCATCTG > 1:747749/1‑150 CCGTGAGTGGTGGGACATGGACCGGTTGTATTTATGATGTAAACAAAATTGGCGCGGCTTTGCGCGATTTTATGAATAAAAACTGAAAGCATAAATAAAAACATCCAGACACCTGAATTATCCGACTCTGCATCATTCGTTATTTGCTCAGTCGGATAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4522212‑4522053‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agtcggataatTCAGGTGTCTGGATGTTTTTATTTATGCTTTCAGTTTTTATTCATAAAATCGCGCAAAGCCGCGCCAATTTTGTTTACATCATAAATACAACCGGTCCATGTCCCACCACTCACGGCCTGAAGCATTGCCCATAGCCGGGTATCATCTG > NC_000913/4522097‑4522245 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |