New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4522467131 (1.010)3 (0.020) 3/258 NT 2.3% coding (1628/1968 nt) yjhG putative dehydratase
?NC_000913 = 4522490 138 (1.150)coding (1605/1968 nt) yjhG putative dehydratase
Rejected: Frequency below/above cutoff threshold.

CCTCCTGTGAAGGTAATTGTTCATCGCTACGGGTTCCGAGGAAATTGACTTCGCCGTGAAGCTCGCGACAATCAATTTTAATTTCAATTAAATCCCCGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4522309‑4522467
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgatgcacgTTTCTCGGGCGTTTCTACTGGCGCGTGCATCGGCCATGTGGGGCCAGAAGCGCTGGCCGGAGGCCCCATCGGTAAATTACGCACCGGGGATTTAATTGAAATTAAAATTGATTGTCGCGAGCTTCACGGCGAAGTCAATTTCCTCGGA  <  NC_000913/4522490‑4522343
                                                                                                                                                                                                                                                                                                                   
CCTCCTGTGAAGGTAATTGTTCATCGCTACGGGTTCCGAGGAAATTGACTTCGCCGTGAAGCTCGCGACAATCAATTTTAATTTCAATTAAATCCCCGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGC                                                                                                                                                               >  1:811069/1‑150
 CTCCTGTGCAGGTAATTGTTCATCGCTCCGGCTTCCGAGGAAATTGACTTCGCCGGGAAGCTCGCGACAATCAATTTTAATTTCAATTAAATCCCCGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCC                                                                                                                                                              <  1:1330917/150‑1
 CTCCTGTGAAGGTAATTGTTCATCGCTACGGGTTCCGAGGAAATTGACTTCGCCGTGAAGCTCGCGACAATCAATTTTAATTTCAATTAAATCCCCGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCC                                                                                                                                                              >  1:975437/1‑150
  aCCTGTGAAGGTAATTGTTCATCGCTACGGGTTCCGAGGAAATTGACTTCGCCGTGAAGCTCGCGACAATCAATTTTAATTTCAATTAAATCCCCGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCG                                                                                                                                                             <  2:585057/149‑1
  TCCTGTGAAGGTAATTGTTCATCGCTACGGGTTCCGAGGAAATTGACTTCGCCGTGAAGCTCGCGACAATCAATTTTAATTTCAATTAAATCCCCGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCG                                                                                                                                                             >  1:1938298/1‑150
   CCTGTGAAGGTAATTGTTCATCGCTACGGGTTCCGAGGAAATTGACTTCGCCGTGAAGCTCGCGACAATCAATTTTAATTTCAATTAAATCCCCGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGA                                                                                                                                                            <  1:387692/150‑1
     TGTGAAGGTAATTGTTCATCGCTACGGGTTCCGAGGAAATTGACTTCGCCGTGAAGCTCGCGACAATCAATTTTAGTTTCAATTAAATCCCCGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATG                                                                                                                                                          >  2:378100/1‑150
     TGTGAAGGTAATTGTTCATCGCTACGGGTTCCGAGGAAATTGACTTCGCCGTGAAGCTCGCGACAATCAATTTTAATTTCAATTAAATCCCCGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATG                                                                                                                                                          <  1:1711060/150‑1
      gaGAAGGTAATTGTTCATCGCTACGGGTTCCGAGGAAATTGACTTCGCCGTGAAGCTCGCGACAATCAATTTTAATTTCAATTAAATCCCCGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGC                                                                                                                                                         >  2:1283535/3‑150
      GTGAAGGTAATTGTTCATCGCTACGGGTTCCGAGGAAATTGACTTCGCCGTGAAGCTCGCGACAATCAATTTTAATTTCAATTAAATCCCCGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGC                                                                                                                                                         >  1:1383509/1‑150
      GTGAAGGTAATTGTTCATCGCTACGGGTTCCGAGGAAATTGACTTCGCCGTGAAGCTCGCGACAATCAATTTTAATTTCAATTAAATCCCCGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGC                                                                                                                                                         >  2:1374325/1‑150
       TGAAGGTAATTGTTCATCGCTACGGGTTCCGAGGAAATTGACTTCGCCGTGAAGCTCGCGACAATCAATTTTAATTTCAATTAAATCCCCGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCA                                                                                                                                                        <  1:65084/150‑1
        GAAGGTAATTGTTCATCGCTACGGGTTCCGAGGAAATTGACTTCGCCGTGAAGCTCGCGACAATCAATTTTAATTTCAATTAAATCCCCGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCAC                                                                                                                                                       >  2:1229738/1‑150
                                         AAATTGACTTCGCCGTGAAGCTCGCGACAATCAATTTTAATTTCAATTAAATCCCCGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGTTTCTCGGGCGTTTCTACTGGCGCGTGCATCG                                                                                                                      <  1:221198/150‑1
                                          AATTGACTTCGCCGTGAAGCTCGCGACAATCAATTTTAATTTCAATTAAATCCCCGGTGCGTACTTTACCGATGGGGCCTCCGGCCAGCGCTGCTGGCCCCACATGGCCGATGCACGTTTCTCGGGCGTTTCTACTGGCGCGGGCATCGG                                                                                                                     <  1:339644/150‑1
                                           ATTGACTTCGCCGTGAAGCTCGCGACAATCAATTTTAATTTCAATTAAATCCCCGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGTTTCTCGGGCGTTTCTACTGGCGCGTGCATCGGC                                                                                                                    <  1:1252380/150‑1
                                                                                                                                                     CCGATGCACGTTTCTCGGGCGTTTCTACTGGCGCGTGCATCGGCCATGTGGGGCCAGAAGCGCTGGCCGGAGGCCCCATCGGTAAATTACGCACCGGGGATTTAATTGAAATTAAAATTGATTGTCGCGAGCTTCACGGCGAAGTCAATT          <  1:1686125/150‑1
                                                                                                                                                     CCGATGCACGTTTCTCGGGCGTTTCTACTGGCGCGTGCATCGGCCATGTGGGGCCAGAAGCGCTGGCCGGAGGCCCCATCGGTAAATTACGCACCGGGGATATAATTGAAATTAAAATTGATTGTCGCGAGCTTCACCGCGAAGTCAATT          >  2:1602985/1‑150
                                                                                                                                                      CGATGCACGTTTCTCGGGCGTTTCTACTGGCGCGTGCATCGGCCATGTGGGGCCAGAAGCGCTGGCCGGAGGCCCCATCGGTAAATTACGCACCGGGGATTTAATTGAAATTAAAATTGATTGTCGCGAGCTTCACGGCGAAGTCAATTT         <  2:1550033/150‑1
                                                                                                                                                          GCAAGTTTCTCGGGCGTTTCTACTGGCGCTTGCTTCGGCCATGTGGGGCCAGAAGCGCTGGCCGGAGGCCCCATCGGTAAATTACGCACCGGGGATTTAATTGAAATTAAAATAGATTGTCGCGAGCTTCACGGCGAAGTCAATTTCCTC     <  2:949859/150‑1
                                                                                                                                                           CACGTTTCTCGGGCGTTTCTACTGGCGCGTGCATCGGCCATGTGGGGCCAGAAGCGCTGGCCGGAGGCCCCATCGGTAAATTACGCACCGGGGATTTAATTGAAATTAAAATTGATTGTCGCGAGCTTCACGGCGAAGTCAATTTCCTCG    <  2:1771465/150‑1
                                                                                                                                                           CACGTTTCTCGGGCGTTTCTACTGGCGCGTGCATCGGCCATGTGGGGCCAGAAGCGCTGGCCGGAGGCCCCATCGGTAAATTACGCACCGGGGATTTAATTGAAATTAAAATTGATTGTCGCGAGCTTCACGGCGAAGTCAATTTCCTCG    <  1:748538/150‑1
                                                                                                                                                           CACGTTTCTCGGGCGTTTCTACTGGCGCGTGCATCGGCCATGTGGGGCCAGAAGCGCTGGCCGGAGGCCCCATCGGTAAATTACGCACCGGGGATTTAATTGAAATTAAAATTGATTGTCGCGAGCTTCACGGCGAAGTCAATTTCCTCG    <  1:1804/150‑1
                                                                                                                                                           CACGGTTCTCGGGCGTTTCTACTGGCGCGTGCATCGGCCATGTGGCGCCAGAAGCGCTGGCCGGAGGCCCCATCGGTAAATTACGCACCGGGGATTTAATTGAAATTAAAATTGATTGTCGCGAGCTTCACGGCGAAGTCAATTTCCTCG    <  2:30924/150‑1
                                                                                                                                                             CGTTTCTCGGGCGTTTCTACTGGCGCGTGCATCGGCCATGTGGGGCCAGAAGCGCTGGCCGGAGGCCCCATCGGTAAATTACGCACCGGGGATTTAATTGAAATTAAAATTGATTGTCGCGAGCTTCACGGCGAAGTCAATTTACTCGGA  >  2:1111830/1‑150
                                                                                                                                                                                                                                                                                                                   
CCTCCTGTGAAGGTAATTGTTCATCGCTACGGGTTCCGAGGAAATTGACTTCGCCGTGAAGCTCGCGACAATCAATTTTAATTTCAATTAAATCCCCGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4522309‑4522467
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgatgcacgTTTCTCGGGCGTTTCTACTGGCGCGTGCATCGGCCATGTGGGGCCAGAAGCGCTGGCCGGAGGCCCCATCGGTAAATTACGCACCGGGGATTTAATTGAAATTAAAATTGATTGTCGCGAGCTTCACGGCGAAGTCAATTTCCTCGGA  <  NC_000913/4522490‑4522343

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.